RNA–Protein interactions for RNA: ENST00000354959.8

ZNF43-201, Transcript of zinc finger protein 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF43, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF43-201ENST00000354959 ERICH3Q5RHP9 1530 aa11.2□□□□□ -0.62
ZNF43-201ENST00000354959 PRDM2Q13029 1718 aa11.2□□□□□ -0.62
ZNF43-201ENST00000354959 TRIM52Q96A61 297 aa11.19□□□□□ -0.62
ZNF43-201ENST00000354959 TIMELESSQ9UNS1 1208 aa11.19□□□□□ -0.62
ZNF43-201ENST00000354959 HIRIP3Q9BW71 556 aaPredicted RBP11.18□□□□□ -0.62
ZNF43-201ENST00000354959 ERCC6Q03468 1493 aa11.18□□□□□ -0.62
ZNF43-201ENST00000354959 ARAP1Q96P48 1450 aa11.17□□□□□ -0.62
ZNF43-201ENST00000354959 FANCD2Q9BXW9 1451 aa11.17□□□□□ -0.62
ZNF43-201ENST00000354959 MSH5O43196 834 aa11.16□□□□□ -0.62
ZNF43-201ENST00000354959 ERICH6BQ5W0A0 696 aa11.14□□□□□ -0.63
ZNF43-201ENST00000354959 CCNB3Q8WWL7 1395 aa11.14□□□□□ -0.63
ZNF43-201ENST00000354959 MAPKBP1O60336 1514 aa11.13□□□□□ -0.63
ZNF43-201ENST00000354959 SIN3AQ96ST3 1273 aa11.13□□□□□ -0.63
ZNF43-201ENST00000354959 PPP1R15AO75807 674 aaPredicted RBP11.13□□□□□ -0.63
ZNF43-201ENST00000354959 RAB3GAP2Q9H2M9 1393 aa11.12□□□□□ -0.63
ZNF43-201ENST00000354959 KIF21AQ7Z4S6 1674 aa11.12□□□□□ -0.63
ZNF43-201ENST00000354959 WDR97A6NE52 1622 aa11.12□□□□□ -0.63
ZNF43-201ENST00000354959 PRXQ9BXM0 1461 aa11.11□□□□□ -0.63
ZNF43-201ENST00000354959 MAP3K1Q13233 1512 aa11.1□□□□□ -0.63
ZNF43-201ENST00000354959 TOP2BQ02880 1626 aa11.1□□□□□ -0.63
ZNF43-201ENST00000354959 CDK11AQ9UQ88 783 aaPredicted RBP11.09□□□□□ -0.63
ZNF43-201ENST00000354959 ERICH6Q7L0X2 663 aa11.09□□□□□ -0.63
ZNF43-201ENST00000354959 MRC2Q9UBG0 1479 aa11.09□□□□□ -0.63
ZNF43-201ENST00000354959 IRX6P78412 446 aaPredicted RBP11.08□□□□□ -0.64
ZNF43-201ENST00000354959 ANP32CO43423 234 aa11.07□□□□□ -0.64
ZNF43-201ENST00000354959 BIVM-ERCC5R4GMW8 1640 aa11.07□□□□□ -0.64
ZNF43-201ENST00000354959 SETD5Q9C0A6 1442 aa11.05□□□□□ -0.64
ZNF43-201ENST00000354959 THOC2Q8NI27 1593 aaKnown RBP11.05□□□□□ -0.64
ZNF43-201ENST00000354959 WDR62O43379 1518 aa11.04□□□□□ -0.64
ZNF43-201ENST00000354959 PRKCSHP14314 528 aaPredicted RBP11.03□□□□□ -0.64
ZNF43-201ENST00000354959 DNMBPQ6XZF7 1577 aa11.03□□□□□ -0.64
ZNF43-201ENST00000354959 URB2Q14146 1524 aaKnown RBP11.02□□□□□ -0.64
ZNF43-201ENST00000354959 ARHGAP35Q9NRY4 1499 aa11.02□□□□□ -0.65
ZNF43-201ENST00000354959 TOPBP1Q92547 1522 aa11.01□□□□□ -0.65
ZNF43-201ENST00000354959 FAM50AQ14320 339 aaKnown RBP10.99□□□□□ -0.65
ZNF43-201ENST00000354959 CUX1P39880 1505 aa10.98□□□□□ -0.65
ZNF43-201ENST00000354959 PPP4R2Q9NY27 417 aa10.98□□□□□ -0.65
ZNF43-201ENST00000354959 DEKP35659 375 aaKnown RBP10.98□□□□□ -0.65
ZNF43-201ENST00000354959 PHLDB1Q86UU1 1377 aa10.97□□□□□ -0.65
ZNF43-201ENST00000354959 TIAM1Q13009 1591 aa10.97□□□□□ -0.65
ZNF43-201ENST00000354959 HNRNPUQ00839 825 aaKnown RBP eCLIP10.97□□□□□ -0.65
ZNF43-201ENST00000354959 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.96□□□□□ -0.65
ZNF43-201ENST00000354959 KIF27Q86VH2 1401 aa10.94□□□□□ -0.66
ZNF43-201ENST00000354959 POLA1P09884 1462 aaPredicted RBP10.93□□□□□ -0.66
ZNF43-201ENST00000354959 FGD5Q6ZNL6 1462 aa10.93□□□□□ -0.66
ZNF43-201ENST00000354959 LRRC9Q6ZRR7 1453 aa10.92□□□□□ -0.66
ZNF43-201ENST00000354959 IFT140Q96RY7 1462 aa10.91□□□□□ -0.66
ZNF43-201ENST00000354959 ATP1B4Q9UN42 357 aaPredicted RBP10.91□□□□□ -0.66
ZNF43-201ENST00000354959 FHAD1B1AJZ9 1412 aa10.9□□□□□ -0.66
ZNF43-201ENST00000354959 NOP58Q9Y2X3 529 aaKnown RBP10.9□□□□□ -0.66
ZNF43-201ENST00000354959 P3H3Q8IVL6 736 aa10.9□□□□□ -0.67
ZNF43-201ENST00000354959 CFAP43Q8NDM7 1665 aa10.89□□□□□ -0.67
ZNF43-201ENST00000354959 CCDC184Q52MB2 194 aa10.88□□□□□ -0.67
ZNF43-201ENST00000354959 B4GALNT3Q6L9W6 998 aa10.87□□□□□ -0.67
ZNF43-201ENST00000354959 TONSLQ96HA7 1378 aa10.87□□□□□ -0.67
ZNF43-201ENST00000354959 TARBP1Q13395 1621 aaKnown RBP10.86□□□□□ -0.67
ZNF43-201ENST00000354959 NBR1Q14596 966 aa10.86□□□□□ -0.67
ZNF43-201ENST00000354959 ABCA10Q8WWZ4 1543 aa10.85□□□□□ -0.67
ZNF43-201ENST00000354959 RAD54L2Q9Y4B4 1467 aa10.85□□□□□ -0.67
ZNF43-201ENST00000354959 PAK3O75914 559 aaPredicted RBP10.83□□□□□ -0.68
ZNF43-201ENST00000354959 ZBED9Q6R2W3 1325 aa10.83□□□□□ -0.68
ZNF43-201ENST00000354959 NCOA2Q15596 1464 aa10.83□□□□□ -0.68
ZNF43-201ENST00000354959 UACAQ9BZF9 1416 aa10.82□□□□□ -0.68
ZNF43-201ENST00000354959 WASHC2AQ641Q2 1341 aa10.82□□□□□ -0.68
ZNF43-201ENST00000354959 PCF11O94913 1555 aaKnown RBP10.81□□□□□ -0.68
ZNF43-201ENST00000354959 IGF1RP08069 1367 aa10.81□□□□□ -0.68
ZNF43-201ENST00000354959 FAM9BQ8IZU0 186 aa10.81□□□□□ -0.68
ZNF43-201ENST00000354959 IPO9Q96P70 1041 aaKnown RBP10.81□□□□□ -0.68
ZNF43-201ENST00000354959 RTL5Q5HYW3 569 aaPredicted RBP10.8□□□□□ -0.68
ZNF43-201ENST00000354959 ANP32AP39687 249 aaKnown RBP10.79□□□□□ -0.68
ZNF43-201ENST00000354959 ZNF608Q9ULD9 1512 aaPredicted RBP10.79□□□□□ -0.68
ZNF43-201ENST00000354959 HFM1A2PYH4 1435 aa10.79□□□□□ -0.68
ZNF43-201ENST00000354959 TDRD9Q8NDG6 1382 aaKnown RBP10.79□□□□□ -0.68
ZNF43-201ENST00000354959 AQRO60306 1485 aaKnown RBP eCLIP10.79□□□□□ -0.68
ZNF43-201ENST00000354959 KDM5BQ9UGL1 1544 aa10.79□□□□□ -0.68
ZNF43-201ENST00000354959 USP35Q9P2H5 1018 aa10.79□□□□□ -0.68
ZNF43-201ENST00000354959 CNTLNQ9NXG0 1405 aa10.78□□□□□ -0.68
ZNF43-201ENST00000354959 CCDC18Q5T9S5 1454 aa10.78□□□□□ -0.68
ZNF43-201ENST00000354959 EIF4G3O43432 1585 aaKnown RBP10.78□□□□□ -0.68
ZNF43-201ENST00000354959 GAPVD1Q14C86 1478 aa10.78□□□□□ -0.68
ZNF43-201ENST00000354959 PTPRKQ15262 1439 aa10.78□□□□□ -0.68
ZNF43-201ENST00000354959 HSPA5P11021 654 aaKnown RBP10.78□□□□□ -0.68
ZNF43-201ENST00000354959 FYCO1Q9BQS8 1478 aa10.77□□□□□ -0.69
ZNF43-201ENST00000354959 ABCA5Q8WWZ7 1642 aa10.77□□□□□ -0.69
ZNF43-201ENST00000354959 FHOD3Q2V2M9 1422 aa10.77□□□□□ -0.69
ZNF43-201ENST00000354959 SENP3-EIF4A1A0A087X0R7 540 aa10.77□□□□□ -0.69
ZNF43-201ENST00000354959 CARMIL1Q5VZK9 1371 aa10.77□□□□□ -0.69
ZNF43-201ENST00000354959 RNF123Q5XPI4 1314 aa10.76□□□□□ -0.69
ZNF43-201ENST00000354959 GRIN2BQ13224 1484 aa10.76□□□□□ -0.69
ZNF43-201ENST00000354959 C11orf95C9JLR9 678 aaPredicted RBP10.75□□□□□ -0.69
ZNF43-201ENST00000354959 ANO8Q9HCE9 1232 aaPredicted RBP10.75□□□□□ -0.69
ZNF43-201ENST00000354959 ZBTB47Q9UFB7 747 aaPredicted RBP10.75□□□□□ -0.69
ZNF43-201ENST00000354959 SMG6Q86US8 1419 aaKnown RBP10.75□□□□□ -0.69
ZNF43-201ENST00000354959 PTPN23Q9H3S7 1636 aa10.75□□□□□ -0.69
ZNF43-201ENST00000354959 CNGB1Q14028 1251 aaPredicted RBP10.74□□□□□ -0.69
ZNF43-201ENST00000354959 EFCAB5A4FU69 1503 aa10.74□□□□□ -0.69
ZNF43-201ENST00000354959 MRS2Q9HD23 443 aa10.74□□□□□ -0.69
ZNF43-201ENST00000354959 FGD6Q6ZV73 1430 aa10.73□□□□□ -0.69
ZNF43-201ENST00000354959 CASKIN1Q8WXD9 1431 aa10.73□□□□□ -0.69
ZNF43-201ENST00000354959 PRKRIP1Q9H875 184 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms