RNA–Protein interactions for RNA: ENST00000354959.8

ZNF43-201, Transcript of zinc finger protein 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF43, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF43-201ENST00000354959 NISCHQ9Y2I1 1504 aa15.23■□□□□ 0.03
ZNF43-201ENST00000354959 CCDC180Q9P1Z9 1646 aa13.47□□□□□ -0.25
ZNF43-201ENST00000354959 SHROOM4Q9ULL8 1493 aa13.4□□□□□ -0.26
ZNF43-201ENST00000354959 HRCP23327 699 aa13.36□□□□□ -0.27
ZNF43-201ENST00000354959 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
ZNF43-201ENST00000354959 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
ZNF43-201ENST00000354959 PELP1Q8IZL8 1130 aaKnown RBP13.12□□□□□ -0.31
ZNF43-201ENST00000354959 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
ZNF43-201ENST00000354959 PCGF6Q9BYE7 350 aa13.1□□□□□ -0.31
ZNF43-201ENST00000354959 CHIC1Q5VXU3 224 aa12.99□□□□□ -0.33
ZNF43-201ENST00000354959 ABCC9O60706 1549 aa12.94□□□□□ -0.34
ZNF43-201ENST00000354959 DCAF1Q9Y4B6 1507 aa12.93□□□□□ -0.34
ZNF43-201ENST00000354959 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
ZNF43-201ENST00000354959 LOC105371045A0A1W2PR82 267 aa12.76□□□□□ -0.37
ZNF43-201ENST00000354959 ZEB1P37275 1124 aaPredicted RBP12.73□□□□□ -0.37
ZNF43-201ENST00000354959 MYT1Q01538 1121 aa12.71□□□□□ -0.37
ZNF43-201ENST00000354959 TRIM26Q12899 539 aaPredicted RBP12.7□□□□□ -0.38
ZNF43-201ENST00000354959 DCAF8L2P0C7V8 631 aa12.65□□□□□ -0.38
ZNF43-201ENST00000354959 NACADO15069 1562 aa12.63□□□□□ -0.39
ZNF43-201ENST00000354959 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
ZNF43-201ENST00000354959 SCAF1Q9H7N4 1312 aaKnown RBP12.55□□□□□ -0.4
ZNF43-201ENST00000354959 EHMT2Q96KQ7 1210 aa12.34□□□□□ -0.43
ZNF43-201ENST00000354959 ACIN1Q9UKV3 1341 aaKnown RBP12.32□□□□□ -0.44
ZNF43-201ENST00000354959 FAM9AQ8IZU1 332 aaPredicted RBP12.32□□□□□ -0.44
ZNF43-201ENST00000354959 SCRIBQ14160 1630 aa12.26□□□□□ -0.45
ZNF43-201ENST00000354959 NEUROD1Q13562 356 aa12.24□□□□□ -0.45
ZNF43-201ENST00000354959 UNC13AQ9UPW8 1703 aa12.24□□□□□ -0.45
ZNF43-201ENST00000354959 CENPBP07199 599 aaPredicted RBP12.23□□□□□ -0.45
ZNF43-201ENST00000354959 TRIM41Q8WV44 630 aa12.23□□□□□ -0.45
ZNF43-201ENST00000354959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.18□□□□□ -0.46
ZNF43-201ENST00000354959 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.46
ZNF43-201ENST00000354959 BICRAQ9NZM4 1560 aa12.15□□□□□ -0.47
ZNF43-201ENST00000354959 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
ZNF43-201ENST00000354959 RSF1Q96T23 1441 aaPredicted RBP12.1□□□□□ -0.47
ZNF43-201ENST00000354959 CCER1Q8TC90 406 aaPredicted RBP12.09□□□□□ -0.47
ZNF43-201ENST00000354959 DIEXFQ68CQ4 756 aaKnown RBP12.08□□□□□ -0.48
ZNF43-201ENST00000354959 TTBK1Q5TCY1 1321 aaPredicted RBP12.02□□□□□ -0.49
ZNF43-201ENST00000354959 YTHDC1Q96MU7 727 aaKnown RBP11.94□□□□□ -0.5
ZNF43-201ENST00000354959 WRNQ14191 1432 aaPredicted RBP eCLIP11.92□□□□□ -0.55e-6■■■■■ 29.2
ZNF43-201ENST00000354959 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
ZNF43-201ENST00000354959 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
ZNF43-201ENST00000354959 EIF4G1Q04637 1599 aaKnown RBP11.83□□□□□ -0.52
ZNF43-201ENST00000354959 CECR2Q9BXF3 1484 aa11.83□□□□□ -0.52
ZNF43-201ENST00000354959 BAZ1AQ9NRL2 1556 aaPredicted RBP11.81□□□□□ -0.52
ZNF43-201ENST00000354959 MIER1Q8N108 512 aa11.8□□□□□ -0.52
ZNF43-201ENST00000354959 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
ZNF43-201ENST00000354959 SMARCA4P51532 1647 aa11.77□□□□□ -0.53
ZNF43-201ENST00000354959 WIZO95785 1651 aa11.76□□□□□ -0.53
ZNF43-201ENST00000354959 CEP162Q5TB80 1403 aa11.73□□□□□ -0.53
ZNF43-201ENST00000354959 CC2D2AQ9P2K1 1620 aa11.72□□□□□ -0.53
ZNF43-201ENST00000354959 TNIKQ9UKE5 1360 aa11.71□□□□□ -0.54
ZNF43-201ENST00000354959 ABCC8Q09428 1581 aa11.7□□□□□ -0.54
ZNF43-201ENST00000354959 CCDC88BA6NC98 1476 aa11.69□□□□□ -0.54
ZNF43-201ENST00000354959 SMARCA2P51531 1590 aa11.69□□□□□ -0.54
ZNF43-201ENST00000354959 EEA1Q15075 1411 aa11.68□□□□□ -0.54
ZNF43-201ENST00000354959 PEG3Q9GZU2 1588 aa11.67□□□□□ -0.54
ZNF43-201ENST00000354959 HNRNPUL2Q1KMD3 747 aaKnown RBP11.67□□□□□ -0.54
ZNF43-201ENST00000354959 ATAD2BQ9ULI0 1458 aa11.66□□□□□ -0.54
ZNF43-201ENST00000354959 SOGA1O94964 1423 aa11.65□□□□□ -0.54
ZNF43-201ENST00000354959 DNAJC5BQ9UF47 199 aa11.65□□□□□ -0.54
ZNF43-201ENST00000354959 ANP32EQ9BTT0 268 aa11.65□□□□□ -0.55
ZNF43-201ENST00000354959 NCAPD3P42695 1498 aa11.64□□□□□ -0.55
ZNF43-201ENST00000354959 UBTFP17480 764 aaKnown RBP11.63□□□□□ -0.55
ZNF43-201ENST00000354959 HMGXB3Q12766 1538 aa11.61□□□□□ -0.55
ZNF43-201ENST00000354959 RUSC2Q8N2Y8 1516 aa11.61□□□□□ -0.55
ZNF43-201ENST00000354959 SUPT16HQ9Y5B9 1047 aaKnown RBP11.6□□□□□ -0.55
ZNF43-201ENST00000354959 BAZ1BQ9UIG0 1483 aaKnown RBP11.59□□□□□ -0.55
ZNF43-201ENST00000354959 TSHZ2Q9NRE2 1034 aa11.55□□□□□ -0.56
ZNF43-201ENST00000354959 CSRNP3Q8WYN3 585 aa11.54□□□□□ -0.56
ZNF43-201ENST00000354959 BCL11AQ9H165 835 aa11.54□□□□□ -0.56
ZNF43-201ENST00000354959 GOLGA3Q08378 1498 aa11.54□□□□□ -0.56
ZNF43-201ENST00000354959 TOP2AP11388 1531 aaKnown RBP11.52□□□□□ -0.57
ZNF43-201ENST00000354959 RANGAP1P46060 587 aaPredicted RBP11.48□□□□□ -0.57
ZNF43-201ENST00000354959 KIF21BO75037 1637 aa11.45□□□□□ -0.58
ZNF43-201ENST00000354959 CEP164Q9UPV0 1460 aa11.44□□□□□ -0.58
ZNF43-201ENST00000354959 VPS8Q8N3P4 1428 aa11.43□□□□□ -0.58
ZNF43-201ENST00000354959 KCNH8Q96L42 1107 aa11.42□□□□□ -0.58
ZNF43-201ENST00000354959 CLIP1P30622 1438 aa11.41□□□□□ -0.58
ZNF43-201ENST00000354959 BCANQ96GW7 911 aa11.41□□□□□ -0.58
ZNF43-201ENST00000354959 DHX57Q6P158 1386 aaKnown RBP11.38□□□□□ -0.59
ZNF43-201ENST00000354959 AEBP2Q6ZN18 517 aaPredicted RBP11.38□□□□□ -0.59
ZNF43-201ENST00000354959 APLP2Q06481 763 aa11.37□□□□□ -0.59
ZNF43-201ENST00000354959 CUX2O14529 1486 aa11.34□□□□□ -0.59
ZNF43-201ENST00000354959 RAPGEF2Q9Y4G8 1499 aa11.32□□□□□ -0.6
ZNF43-201ENST00000354959 CADPSQ9ULU8 1353 aa11.31□□□□□ -0.6
ZNF43-201ENST00000354959 SYNJ1O43426 1573 aa11.31□□□□□ -0.6
ZNF43-201ENST00000354959 LAMC3Q9Y6N6 1575 aa11.31□□□□□ -0.6
ZNF43-201ENST00000354959 MYT1LQ9UL68 1186 aa11.29□□□□□ -0.6
ZNF43-201ENST00000354959 FKBP8Q14318 412 aa11.29□□□□□ -0.6
ZNF43-201ENST00000354959 KANK4Q5T7N3 995 aaPredicted RBP11.29□□□□□ -0.6
ZNF43-201ENST00000354959 RBM19Q9Y4C8 960 aaKnown RBP11.29□□□□□ -0.6
ZNF43-201ENST00000354959 CFTRP13569 1480 aa11.28□□□□□ -0.6
ZNF43-201ENST00000354959 RRBP1Q9P2E9 1410 aaKnown RBP11.27□□□□□ -0.61
ZNF43-201ENST00000354959 ITGAEP38570 1179 aa11.25□□□□□ -0.61
ZNF43-201ENST00000354959 NEFLP07196 543 aa11.25□□□□□ -0.61
ZNF43-201ENST00000354959 NESP48681 1621 aa11.24□□□□□ -0.61
ZNF43-201ENST00000354959 PDS5BQ9NTI5 1447 aa11.24□□□□□ -0.61
ZNF43-201ENST00000354959 FANCIQ9NVI1 1328 aa11.24□□□□□ -0.61
ZNF43-201ENST00000354959 CCER2I3L3R5 266 aa11.21□□□□□ -0.61
ZNF43-201ENST00000354959 DDX10Q13206 875 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms