RNA–Protein interactions for RNA: ENST00000354209.7

PRKAA1-202, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-202ENST00000354209 MAGI1Q96QZ7 1491 aaPredicted RBP34■■■■□ 3.03
PRKAA1-202ENST00000354209 EFCAB5A4FU69 1503 aa33.87■■■■□ 3.01
PRKAA1-202ENST00000354209 GRIN2AQ12879 1464 aa33.87■■■■□ 3.01
PRKAA1-202ENST00000354209 SYNJ2O15056 1496 aa33.86■■■■□ 3.01
PRKAA1-202ENST00000354209 IQGAP2Q13576 1575 aa33.77■■■■□ 3
PRKAA1-202ENST00000354209 SAMD9Q5K651 1589 aa33.76■■■■□ 3
PRKAA1-202ENST00000354209 TRIM26Q12899 539 aaPredicted RBP33.75■■■□□ 2.99
PRKAA1-202ENST00000354209 PPARGC1BQ86YN6 1023 aaKnown RBP33.7■■■□□ 2.99
PRKAA1-202ENST00000354209 KIAA0586Q9BVV6 1533 aa33.7■■■□□ 2.98
PRKAA1-202ENST00000354209 CHMP7Q8WUX9 453 aaPredicted RBP33.69■■■□□ 2.98
PRKAA1-202ENST00000354209 PCGF6Q9BYE7 350 aa33.69■■■□□ 2.98
PRKAA1-202ENST00000354209 FHOD3Q2V2M9 1422 aa33.67■■■□□ 2.98
PRKAA1-202ENST00000354209 CEP170Q5SW79 1584 aa33.66■■■□□ 2.98
PRKAA1-202ENST00000354209 NUP160Q12769 1436 aa33.64■■■□□ 2.98
PRKAA1-202ENST00000354209 UGGT2Q9NYU1 1516 aa33.62■■■□□ 2.97
PRKAA1-202ENST00000354209 P3H3Q8IVL6 736 aa33.61■■■□□ 2.97
PRKAA1-202ENST00000354209 FBLN2P98095 1184 aa33.57■■■□□ 2.96
PRKAA1-202ENST00000354209 APLP2Q06481 763 aa33.57■■■□□ 2.96
PRKAA1-202ENST00000354209 PCF11O94913 1555 aaKnown RBP33.55■■■□□ 2.96
PRKAA1-202ENST00000354209 FMN1Q68DA7 1419 aa33.53■■■□□ 2.96
PRKAA1-202ENST00000354209 CHD1O14646 1710 aa33.5■■■□□ 2.95
PRKAA1-202ENST00000354209 FYCO1Q9BQS8 1478 aa33.48■■■□□ 2.95
PRKAA1-202ENST00000354209 MAP3K1Q13233 1512 aa33.47■■■□□ 2.95
PRKAA1-202ENST00000354209 CASKIN1Q8WXD9 1431 aa33.47■■■□□ 2.95
PRKAA1-202ENST00000354209 DISP1Q96F81 1524 aa33.45■■■□□ 2.94
PRKAA1-202ENST00000354209 KIAA0556O60303 1618 aa33.44■■■□□ 2.94
PRKAA1-202ENST00000354209 TTBK1Q5TCY1 1321 aaPredicted RBP33.44■■■□□ 2.94
PRKAA1-202ENST00000354209 TIAM1Q13009 1591 aa33.42■■■□□ 2.94
PRKAA1-202ENST00000354209 CFAP43Q8NDM7 1665 aa33.38■■■□□ 2.93
PRKAA1-202ENST00000354209 KANK4Q5T7N3 995 aaPredicted RBP33.34■■■□□ 2.93
PRKAA1-202ENST00000354209 JPH4Q96JJ6 628 aa33.29■■■□□ 2.92
PRKAA1-202ENST00000354209 LRRC9Q6ZRR7 1453 aa33.25■■■□□ 2.91
PRKAA1-202ENST00000354209 CARMIL2Q6F5E8 1435 aa33.24■■■□□ 2.91
PRKAA1-202ENST00000354209 LRRIQ1Q96JM4 1722 aa33.23■■■□□ 2.91
PRKAA1-202ENST00000354209 HECW1Q76N89 1606 aa33.21■■■□□ 2.91
PRKAA1-202ENST00000354209 ATP1B4Q9UN42 357 aaPredicted RBP33.2■■■□□ 2.91
PRKAA1-202ENST00000354209 SHROOM2Q13796 1616 aa33.19■■■□□ 2.9
PRKAA1-202ENST00000354209 CLASP1Q7Z460 1538 aa33.15■■■□□ 2.9
PRKAA1-202ENST00000354209 CCDC18Q5T9S5 1454 aa33.14■■■□□ 2.9
PRKAA1-202ENST00000354209 PRG4Q92954 1404 aaPredicted RBP33.11■■■□□ 2.89
PRKAA1-202ENST00000354209 RAPGEF6Q8TEU7 1601 aa33.1■■■□□ 2.89
PRKAA1-202ENST00000354209 EPRSP07814 1512 aaKnown RBP33.08■■■□□ 2.89
PRKAA1-202ENST00000354209 NUP153P49790 1475 aaKnown RBP33.02■■■□□ 2.88
PRKAA1-202ENST00000354209 RRBP1Q9P2E9 1410 aaKnown RBP33.02■■■□□ 2.88
PRKAA1-202ENST00000354209 EHBP1L1Q8N3D4 1523 aa32.99■■■□□ 2.87
PRKAA1-202ENST00000354209 PLB1Q6P1J6 1458 aa32.99■■■□□ 2.87
PRKAA1-202ENST00000354209 CDK13Q14004 1512 aaKnown RBP32.98■■■□□ 2.87
PRKAA1-202ENST00000354209 MTUS2Q5JR59 1369 aa32.97■■■□□ 2.87
PRKAA1-202ENST00000354209 ABCA8O94911 1581 aa32.96■■■□□ 2.87
PRKAA1-202ENST00000354209 MAGI3Q5TCQ9 1506 aa32.95■■■□□ 2.87
PRKAA1-202ENST00000354209 PHLDB1Q86UU1 1377 aa32.93■■■□□ 2.86
PRKAA1-202ENST00000354209 ERCC6L2Q5T890 1561 aa32.92■■■□□ 2.86
PRKAA1-202ENST00000354209 PTPRGP23470 1445 aa32.9■■■□□ 2.86
PRKAA1-202ENST00000354209 CCNB3Q8WWL7 1395 aa32.88■■■□□ 2.85
PRKAA1-202ENST00000354209 SUPT6HQ7KZ85 1726 aaKnown RBP32.87■■■□□ 2.85
PRKAA1-202ENST00000354209 ARHGEF11O15085 1522 aa32.84■■■□□ 2.85
PRKAA1-202ENST00000354209 NCOA2Q15596 1464 aa32.83■■■□□ 2.85
PRKAA1-202ENST00000354209 ARID3CA6NKF2 412 aa32.8■■■□□ 2.84
PRKAA1-202ENST00000354209 UACAQ9BZF9 1416 aa32.74■■■□□ 2.83
PRKAA1-202ENST00000354209 HRCP23327 699 aa32.73■■■□□ 2.83
PRKAA1-202ENST00000354209 HNRNPUL2Q1KMD3 747 aaKnown RBP32.73■■■□□ 2.83
PRKAA1-202ENST00000354209 OSCARQ8IYS5 282 aa32.73■■■□□ 2.83
PRKAA1-202ENST00000354209 ATP10BO94823 1461 aa32.71■■■□□ 2.83
PRKAA1-202ENST00000354209 MYOM3Q5VTT5 1437 aa32.71■■■□□ 2.83
PRKAA1-202ENST00000354209 FGD6Q6ZV73 1430 aa32.71■■■□□ 2.83
PRKAA1-202ENST00000354209 CDK11AQ9UQ88 783 aaPredicted RBP32.71■■■□□ 2.83
PRKAA1-202ENST00000354209 TROQ12816 1431 aaPredicted RBP32.68■■■□□ 2.82
PRKAA1-202ENST00000354209 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.68■■■□□ 2.82
PRKAA1-202ENST00000354209 ABCC2Q92887 1545 aa32.67■■■□□ 2.82
PRKAA1-202ENST00000354209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.67■■■□□ 2.82
PRKAA1-202ENST00000354209 ADCY10Q96PN6 1610 aa32.64■■■□□ 2.82
PRKAA1-202ENST00000354209 UHRF1BP1LA0JNW5 1464 aa32.59■■■□□ 2.81
PRKAA1-202ENST00000354209 FAM50AQ14320 339 aaKnown RBP32.55■■■□□ 2.8
PRKAA1-202ENST00000354209 PTPN23Q9H3S7 1636 aa32.54■■■□□ 2.8
PRKAA1-202ENST00000354209 KIF14Q15058 1648 aa32.54■■■□□ 2.8
PRKAA1-202ENST00000354209 MIA2Q96PC5 1412 aa32.53■■■□□ 2.8
PRKAA1-202ENST00000354209 TCOF1Q13428 1488 aaKnown RBP32.53■■■□□ 2.8
PRKAA1-202ENST00000354209 PLEKHD1A6NEE1 506 aa32.51■■■□□ 2.79
PRKAA1-202ENST00000354209 KDM5BQ9UGL1 1544 aa32.47■■■□□ 2.79
PRKAA1-202ENST00000354209 ITGAEP38570 1179 aa32.46■■■□□ 2.79
PRKAA1-202ENST00000354209 ZCCHC11Q5TAX3 1644 aaKnown RBP32.44■■■□□ 2.78
PRKAA1-202ENST00000354209 ITSN2Q9NZM3 1697 aa32.43■■■□□ 2.78
PRKAA1-202ENST00000354209 ABCC10Q5T3U5 1492 aa32.43■■■□□ 2.78
PRKAA1-202ENST00000354209 GPATCH8Q9UKJ3 1502 aaKnown RBP32.39■■■□□ 2.78
PRKAA1-202ENST00000354209 CCER1Q8TC90 406 aaPredicted RBP32.38■■■□□ 2.77
PRKAA1-202ENST00000354209 ZEB1P37275 1124 aaPredicted RBP32.36■■■□□ 2.77
PRKAA1-202ENST00000354209 PTPRKQ15262 1439 aa32.33■■■□□ 2.77
PRKAA1-202ENST00000354209 CDC42BPAQ5VT25 1732 aa32.33■■■□□ 2.77
PRKAA1-202ENST00000354209 SETD5Q9C0A6 1442 aa32.28■■■□□ 2.76
PRKAA1-202ENST00000354209 CAMSAP2Q08AD1 1489 aa32.25■■■□□ 2.75
PRKAA1-202ENST00000354209 CFDP1Q9UEE9 299 aaPredicted RBP32.25■■■□□ 2.75
PRKAA1-202ENST00000354209 RAB3GAP2Q9H2M9 1393 aa32.24■■■□□ 2.75
PRKAA1-202ENST00000354209 DNMT1P26358 1616 aaKnown RBP32.24■■■□□ 2.75
PRKAA1-202ENST00000354209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.23■■■□□ 2.75
PRKAA1-202ENST00000354209 TTC37Q6PGP7 1564 aa32.22■■■□□ 2.75
PRKAA1-202ENST00000354209 PREX2Q70Z35 1606 aa32.22■■■□□ 2.75
PRKAA1-202ENST00000354209 ZNF644Q9H582 1327 aaPredicted RBP32.21■■■□□ 2.75
PRKAA1-202ENST00000354209 HFM1A2PYH4 1435 aa32.2■■■□□ 2.74
PRKAA1-202ENST00000354209 DAPK1P53355 1430 aa32.19■■■□□ 2.74
PRKAA1-202ENST00000354209 DHX57Q6P158 1386 aaKnown RBP32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms