RNA–Protein interactions for RNA: ENST00000352931.6

PTK7-205, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best) BASIC

Gene PTK7, Length 4,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-205ENST00000352931 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
PTK7-205ENST00000352931 DNAJC5BQ9UF47 199 aa19.68■□□□□ 0.74
PTK7-205ENST00000352931 PDS5BQ9NTI5 1447 aa19.66■□□□□ 0.74
PTK7-205ENST00000352931 FHOD3Q2V2M9 1422 aa19.66■□□□□ 0.74
PTK7-205ENST00000352931 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
PTK7-205ENST00000352931 IGF1RP08069 1367 aa19.64■□□□□ 0.73
PTK7-205ENST00000352931 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
PTK7-205ENST00000352931 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
PTK7-205ENST00000352931 FHAD1B1AJZ9 1412 aa19.62■□□□□ 0.73
PTK7-205ENST00000352931 KCNH8Q96L42 1107 aa19.62■□□□□ 0.73
PTK7-205ENST00000352931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.62■□□□□ 0.735e-6■■■□□ 17.6
PTK7-205ENST00000352931 NESP48681 1621 aa19.61■□□□□ 0.73
PTK7-205ENST00000352931 SLC4A1APQ9BWU0 796 aaKnown RBP19.58■□□□□ 0.72
PTK7-205ENST00000352931 CFTRP13569 1480 aa19.56■□□□□ 0.72
PTK7-205ENST00000352931 CFDP1Q9UEE9 299 aaPredicted RBP19.55■□□□□ 0.72
PTK7-205ENST00000352931 PLEKHD1A6NEE1 506 aa19.54■□□□□ 0.72
PTK7-205ENST00000352931 TSPY4P0CV99 314 aa19.54■□□□□ 0.72
PTK7-205ENST00000352931 TSPY10P0CW01 314 aa19.54■□□□□ 0.72
PTK7-205ENST00000352931 KDM2AQ9Y2K7 1162 aa19.54■□□□□ 0.72
PTK7-205ENST00000352931 CUX1P39880 1505 aa19.49■□□□□ 0.71
PTK7-205ENST00000352931 RAB3GAP2Q9H2M9 1393 aa19.49■□□□□ 0.71
PTK7-205ENST00000352931 CC2D2AQ9P2K1 1620 aa19.49■□□□□ 0.71
PTK7-205ENST00000352931 KIF21BO75037 1637 aa19.48■□□□□ 0.71
PTK7-205ENST00000352931 FOXD1Q16676 465 aa19.47■□□□□ 0.71
PTK7-205ENST00000352931 ARAP1Q96P48 1450 aa19.43■□□□□ 0.7
PTK7-205ENST00000352931 ARHGAP35Q9NRY4 1499 aa19.43■□□□□ 0.7
PTK7-205ENST00000352931 SETD5Q9C0A6 1442 aa19.42■□□□□ 0.7
PTK7-205ENST00000352931 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
PTK7-205ENST00000352931 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
PTK7-205ENST00000352931 FAM9BQ8IZU0 186 aa19.41■□□□□ 0.7
PTK7-205ENST00000352931 ERICH6Q7L0X2 663 aa19.4■□□□□ 0.7
PTK7-205ENST00000352931 FMN1Q68DA7 1419 aa19.39■□□□□ 0.7
PTK7-205ENST00000352931 SENP3-EIF4A1A0A087X0R7 540 aa19.39■□□□□ 0.7
PTK7-205ENST00000352931 HNRNPUQ00839 825 aaKnown RBP eCLIP19.39■□□□□ 0.69
PTK7-205ENST00000352931 RGL3Q3MIN7 710 aa19.38■□□□□ 0.69
PTK7-205ENST00000352931 CLSPNQ9HAW4 1339 aa19.38■□□□□ 0.69
PTK7-205ENST00000352931 PRXQ9BXM0 1461 aa19.37■□□□□ 0.69
PTK7-205ENST00000352931 CHGAP10645 457 aaKnown RBP19.37■□□□□ 0.69
PTK7-205ENST00000352931 AQRO60306 1485 aaKnown RBP eCLIP19.36■□□□□ 0.692e-6■■■■■ 31
PTK7-205ENST00000352931 SENP3Q9H4L4 574 aaPredicted RBP19.35■□□□□ 0.69
PTK7-205ENST00000352931 DHX57Q6P158 1386 aaKnown RBP19.35■□□□□ 0.69
PTK7-205ENST00000352931 GAPVD1Q14C86 1478 aa19.35■□□□□ 0.69
PTK7-205ENST00000352931 PEG3Q9GZU2 1588 aa19.34■□□□□ 0.69
PTK7-205ENST00000352931 EIF4G2P78344 907 aaKnown RBP eCLIP19.34■□□□□ 0.69
PTK7-205ENST00000352931 NPM1P06748 294 aaKnown RBP eCLIP19.33■□□□□ 0.68
PTK7-205ENST00000352931 FKBP8Q14318 412 aa19.32■□□□□ 0.68
PTK7-205ENST00000352931 SALL2Q9Y467 1007 aaPredicted RBP19.31■□□□□ 0.68
PTK7-205ENST00000352931 JPH4Q96JJ6 628 aa19.29■□□□□ 0.68
PTK7-205ENST00000352931 PHLDB1Q86UU1 1377 aa19.28■□□□□ 0.68
PTK7-205ENST00000352931 POLA1P09884 1462 aaPredicted RBP19.27■□□□□ 0.68
PTK7-205ENST00000352931 TOPBP1Q92547 1522 aa19.26■□□□□ 0.67
PTK7-205ENST00000352931 MRS2Q9HD23 443 aa19.23■□□□□ 0.67
PTK7-205ENST00000352931 ERICH3Q5RHP9 1530 aa19.23■□□□□ 0.67
PTK7-205ENST00000352931 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
PTK7-205ENST00000352931 MPHOSPH9Q99550 1183 aa19.19■□□□□ 0.66
PTK7-205ENST00000352931 ZNF644Q9H582 1327 aaPredicted RBP19.17■□□□□ 0.66
PTK7-205ENST00000352931 PPP1R15AO75807 674 aaPredicted RBP19.17■□□□□ 0.66
PTK7-205ENST00000352931 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
PTK7-205ENST00000352931 CARMIL2Q6F5E8 1435 aa19.16■□□□□ 0.66
PTK7-205ENST00000352931 HNRNPMP52272 730 aaKnown RBP eCLIP19.15■□□□□ 0.661e-6■■□□□ 14.4
PTK7-205ENST00000352931 PKD2Q13563 968 aa19.15■□□□□ 0.66
PTK7-205ENST00000352931 LRRC9Q6ZRR7 1453 aa19.15■□□□□ 0.66
PTK7-205ENST00000352931 TMC1Q8TDI8 760 aa19.13■□□□□ 0.65
PTK7-205ENST00000352931 CARD11Q9BXL7 1154 aa19.13■□□□□ 0.65
PTK7-205ENST00000352931 HSPA5P11021 654 aaKnown RBP19.11■□□□□ 0.65
PTK7-205ENST00000352931 DCAF11Q8TEB1 546 aa19.11■□□□□ 0.65
PTK7-205ENST00000352931 L3MBTL2Q969R5 705 aa19.1■□□□□ 0.65
PTK7-205ENST00000352931 TIMELESSQ9UNS1 1208 aa19.06■□□□□ 0.64
PTK7-205ENST00000352931 FGD6Q6ZV73 1430 aa19.05■□□□□ 0.64
PTK7-205ENST00000352931 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
PTK7-205ENST00000352931 NUP155O75694 1391 aa19.03■□□□□ 0.64
PTK7-205ENST00000352931 CASKIN1Q8WXD9 1431 aa19.03■□□□□ 0.64
PTK7-205ENST00000352931 CCDC18Q5T9S5 1454 aa19.02■□□□□ 0.64
PTK7-205ENST00000352931 STAG3Q9UJ98 1225 aa19.02■□□□□ 0.64
PTK7-205ENST00000352931 RRBP1Q9P2E9 1410 aaKnown RBP19.02■□□□□ 0.63
PTK7-205ENST00000352931 BIVM-ERCC5R4GMW8 1640 aa18.99■□□□□ 0.63
PTK7-205ENST00000352931 URB2Q14146 1524 aaKnown RBP18.99■□□□□ 0.63
PTK7-205ENST00000352931 ABCA10Q8WWZ4 1543 aa18.99■□□□□ 0.63
PTK7-205ENST00000352931 GRIN2BQ13224 1484 aa18.98■□□□□ 0.63
PTK7-205ENST00000352931 NCOA2Q15596 1464 aa18.98■□□□□ 0.63
PTK7-205ENST00000352931 SUPT16HQ9Y5B9 1047 aaKnown RBP18.97■□□□□ 0.63
PTK7-205ENST00000352931 MYOM3Q5VTT5 1437 aa18.97■□□□□ 0.63
PTK7-205ENST00000352931 PTPRGP23470 1445 aa18.95■□□□□ 0.62
PTK7-205ENST00000352931 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
PTK7-205ENST00000352931 ANKRD30AQ9BXX3 1397 aa18.94■□□□□ 0.62
PTK7-205ENST00000352931 TIAM1Q13009 1591 aa18.93■□□□□ 0.62
PTK7-205ENST00000352931 ESF1Q9H501 851 aaKnown RBP18.93■□□□□ 0.62
PTK7-205ENST00000352931 PRDM2Q13029 1718 aa18.93■□□□□ 0.62
PTK7-205ENST00000352931 FYCO1Q9BQS8 1478 aa18.92■□□□□ 0.62
PTK7-205ENST00000352931 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.61
PTK7-205ENST00000352931 EFCAB2Q5VUJ9 269 aa18.89■□□□□ 0.61
PTK7-205ENST00000352931 GGT6Q6P531 493 aa18.89■□□□□ 0.61
PTK7-205ENST00000352931 SNAPC4Q5SXM2 1469 aa18.88■□□□□ 0.61
PTK7-205ENST00000352931 CC2D1BQ5T0F9 858 aaKnown RBP18.87■□□□□ 0.61
PTK7-205ENST00000352931 BCL11AQ9H165 835 aa18.87■□□□□ 0.61
PTK7-205ENST00000352931 ZNF608Q9ULD9 1512 aaPredicted RBP18.86■□□□□ 0.61
PTK7-205ENST00000352931 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
PTK7-205ENST00000352931 CDK13Q14004 1512 aaKnown RBP18.83■□□□□ 0.6
PTK7-205ENST00000352931 PRG4Q92954 1404 aaPredicted RBP18.83■□□□□ 0.6
PTK7-205ENST00000352931 EFCAB5A4FU69 1503 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms