RNA–Protein interactions for RNA: ENST00000352931.6

PTK7-205, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best) BASIC

Gene PTK7, Length 4,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-205ENST00000352931 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
PTK7-205ENST00000352931 DCAF8L2P0C7V8 631 aa25.37■■□□□ 1.65
PTK7-205ENST00000352931 SHROOM4Q9ULL8 1493 aa24.64■■□□□ 1.53
PTK7-205ENST00000352931 SUPT5HO00267 1087 aaKnown RBP24.44■■□□□ 1.5
PTK7-205ENST00000352931 EHMT2Q96KQ7 1210 aa23.25■■□□□ 1.31
PTK7-205ENST00000352931 FAM9AQ8IZU1 332 aaPredicted RBP22.9■■□□□ 1.26
PTK7-205ENST00000352931 ABCC9O60706 1549 aa22.63■■□□□ 1.21
PTK7-205ENST00000352931 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
PTK7-205ENST00000352931 PCGF6Q9BYE7 350 aa22.49■■□□□ 1.19
PTK7-205ENST00000352931 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
PTK7-205ENST00000352931 ZCCHC6Q5VYS8 1495 aaKnown RBP22.4■■□□□ 1.18
PTK7-205ENST00000352931 TTBK1Q5TCY1 1321 aaPredicted RBP22.35■■□□□ 1.17
PTK7-205ENST00000352931 LOC105371045A0A1W2PR82 267 aa22.34■■□□□ 1.17
PTK7-205ENST00000352931 CCDC180Q9P1Z9 1646 aa22.22■■□□□ 1.15
PTK7-205ENST00000352931 PABPN1Q86U42 306 aaKnown RBP eCLIP22.18■■□□□ 1.148e-8■■□□□ 13.3
PTK7-205ENST00000352931 RANGAP1P46060 587 aaPredicted RBP22.16■■□□□ 1.14
PTK7-205ENST00000352931 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
PTK7-205ENST00000352931 SCRIBQ14160 1630 aa21.96■■□□□ 1.11
PTK7-205ENST00000352931 UBTFP17480 764 aaKnown RBP21.92■■□□□ 1.1
PTK7-205ENST00000352931 APLP2Q06481 763 aa21.81■■□□□ 1.08
PTK7-205ENST00000352931 TRIM26Q12899 539 aaPredicted RBP21.61■■□□□ 1.05
PTK7-205ENST00000352931 CCER1Q8TC90 406 aaPredicted RBP21.55■■□□□ 1.04
PTK7-205ENST00000352931 ATP1B4Q9UN42 357 aaPredicted RBP21.52■■□□□ 1.04
PTK7-205ENST00000352931 HRCP23327 699 aa21.51■■□□□ 1.03
PTK7-205ENST00000352931 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
PTK7-205ENST00000352931 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
PTK7-205ENST00000352931 DCAF1Q9Y4B6 1507 aa21.35■■□□□ 1.01
PTK7-205ENST00000352931 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
PTK7-205ENST00000352931 ZEB1P37275 1124 aaPredicted RBP21.26■□□□□ 0.99
PTK7-205ENST00000352931 NACADO15069 1562 aa21.23■□□□□ 0.99
PTK7-205ENST00000352931 RB1CC1Q8TDY2 1594 aa21.23■□□□□ 0.99
PTK7-205ENST00000352931 HNRNPUL2Q1KMD3 747 aaKnown RBP21.22■□□□□ 0.99
PTK7-205ENST00000352931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.21■□□□□ 0.99
PTK7-205ENST00000352931 ITGAEP38570 1179 aa21.17■□□□□ 0.98
PTK7-205ENST00000352931 CSRNP3Q8WYN3 585 aa21.1■□□□□ 0.97
PTK7-205ENST00000352931 MROH2BQ7Z745 1585 aa21■□□□□ 0.95
PTK7-205ENST00000352931 YTHDC1Q96MU7 727 aaKnown RBP20.83■□□□□ 0.93
PTK7-205ENST00000352931 P3H3Q8IVL6 736 aa20.82■□□□□ 0.92
PTK7-205ENST00000352931 BAZ1AQ9NRL2 1556 aaPredicted RBP20.82■□□□□ 0.92
PTK7-205ENST00000352931 WIZO95785 1651 aa20.76■□□□□ 0.91
PTK7-205ENST00000352931 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
PTK7-205ENST00000352931 FAM50AQ14320 339 aaKnown RBP20.67■□□□□ 0.9
PTK7-205ENST00000352931 CCDC88BA6NC98 1476 aa20.64■□□□□ 0.89
PTK7-205ENST00000352931 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
PTK7-205ENST00000352931 WRNQ14191 1432 aaPredicted RBP eCLIP20.62■□□□□ 0.89
PTK7-205ENST00000352931 CENPBP07199 599 aaPredicted RBP20.61■□□□□ 0.89
PTK7-205ENST00000352931 ARID3CA6NKF2 412 aa20.6■□□□□ 0.89
PTK7-205ENST00000352931 SOGA1O94964 1423 aa20.6■□□□□ 0.89
PTK7-205ENST00000352931 FBLN2P98095 1184 aa20.54■□□□□ 0.88
PTK7-205ENST00000352931 DIEXFQ68CQ4 756 aaKnown RBP20.53■□□□□ 0.88
PTK7-205ENST00000352931 CEP162Q5TB80 1403 aa20.51■□□□□ 0.87
PTK7-205ENST00000352931 NEUROD1Q13562 356 aa20.44■□□□□ 0.86
PTK7-205ENST00000352931 CLIP1P30622 1438 aa20.44■□□□□ 0.86
PTK7-205ENST00000352931 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
PTK7-205ENST00000352931 SMARCA4P51532 1647 aa20.37■□□□□ 0.85
PTK7-205ENST00000352931 GOLGA3Q08378 1498 aa20.36■□□□□ 0.85
PTK7-205ENST00000352931 TNIKQ9UKE5 1360 aa20.33■□□□□ 0.84
PTK7-205ENST00000352931 EEA1Q15075 1411 aa20.32■□□□□ 0.84
PTK7-205ENST00000352931 CNGB1Q14028 1251 aaPredicted RBP20.32■□□□□ 0.84
PTK7-205ENST00000352931 RUSC2Q8N2Y8 1516 aa20.29■□□□□ 0.84
PTK7-205ENST00000352931 ATAD2BQ9ULI0 1458 aa20.28■□□□□ 0.84
PTK7-205ENST00000352931 TRIM52Q96A61 297 aa20.27■□□□□ 0.84
PTK7-205ENST00000352931 POLR3GLQ9BT43 218 aa20.25■□□□□ 0.83
PTK7-205ENST00000352931 ZNF316A6NFI3 1004 aaPredicted RBP20.22■□□□□ 0.83
PTK7-205ENST00000352931 CEP164Q9UPV0 1460 aa20.22■□□□□ 0.83
PTK7-205ENST00000352931 SMARCA2P51531 1590 aa20.2■□□□□ 0.82
PTK7-205ENST00000352931 MYT1LQ9UL68 1186 aa20.19■□□□□ 0.82
PTK7-205ENST00000352931 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
PTK7-205ENST00000352931 PELP1Q8IZL8 1130 aaKnown RBP20.12■□□□□ 0.81
PTK7-205ENST00000352931 CUX2O14529 1486 aa20.09■□□□□ 0.81
PTK7-205ENST00000352931 ZNF777Q9ULD5 760 aaPredicted RBP20.09■□□□□ 0.81
PTK7-205ENST00000352931 CHIC2Q9UKJ5 165 aa20.08■□□□□ 0.8
PTK7-205ENST00000352931 KANK4Q5T7N3 995 aaPredicted RBP20.02■□□□□ 0.8
PTK7-205ENST00000352931 ZNF326Q5BKZ1 582 aaKnown RBP20.01■□□□□ 0.79
PTK7-205ENST00000352931 RAPGEF2Q9Y4G8 1499 aa20■□□□□ 0.79
PTK7-205ENST00000352931 CARMIL1Q5VZK9 1371 aa20■□□□□ 0.79
PTK7-205ENST00000352931 MTUS2Q5JR59 1369 aa19.97■□□□□ 0.79
PTK7-205ENST00000352931 GTF3C3Q9Y5Q9 886 aa19.96■□□□□ 0.79
PTK7-205ENST00000352931 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
PTK7-205ENST00000352931 CADPSQ9ULU8 1353 aa19.94■□□□□ 0.78
PTK7-205ENST00000352931 HIRIP3Q9BW71 556 aaPredicted RBP19.93■□□□□ 0.78
PTK7-205ENST00000352931 TDRD9Q8NDG6 1382 aaKnown RBP19.93■□□□□ 0.78
PTK7-205ENST00000352931 VPS8Q8N3P4 1428 aa19.91■□□□□ 0.78
PTK7-205ENST00000352931 NEFLP07196 543 aa19.91■□□□□ 0.78
PTK7-205ENST00000352931 BICRAQ9NZM4 1560 aa19.88■□□□□ 0.77
PTK7-205ENST00000352931 RRP7BPQ9NSQ0 103 aa19.87■□□□□ 0.77
PTK7-205ENST00000352931 CDK11AQ9UQ88 783 aaPredicted RBP19.85■□□□□ 0.77
PTK7-205ENST00000352931 EIF4G1Q04637 1599 aaKnown RBP19.84■□□□□ 0.77
PTK7-205ENST00000352931 MIER1Q8N108 512 aa19.83■□□□□ 0.77
PTK7-205ENST00000352931 ACIN1Q9UKV3 1341 aaKnown RBP19.83■□□□□ 0.76
PTK7-205ENST00000352931 DDX10Q13206 875 aaKnown RBP19.81■□□□□ 0.76
PTK7-205ENST00000352931 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.76
PTK7-205ENST00000352931 NCAPD3P42695 1498 aa19.76■□□□□ 0.75
PTK7-205ENST00000352931 TONSLQ96HA7 1378 aa19.76■□□□□ 0.75
PTK7-205ENST00000352931 SYNJ1O43426 1573 aa19.76■□□□□ 0.75
PTK7-205ENST00000352931 CCNB3Q8WWL7 1395 aa19.73■□□□□ 0.75
PTK7-205ENST00000352931 ANP32CO43423 234 aa19.73■□□□□ 0.75
PTK7-205ENST00000352931 BCANQ96GW7 911 aa19.73■□□□□ 0.75
PTK7-205ENST00000352931 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
PTK7-205ENST00000352931 ERCC6Q03468 1493 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms