RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 MAPKBP1O60336 1514 aa28.48■■■□□ 2.15
COPE-202ENST00000349893 RUSC2Q8N2Y8 1516 aa28.48■■■□□ 2.15
COPE-202ENST00000349893 DIP2BQ9P265 1576 aa28.41■■■□□ 2.14
COPE-202ENST00000349893 FAM69CQ0P6D2 419 aa28.4■■■□□ 2.14
COPE-202ENST00000349893 ADCY10Q96PN6 1610 aa28.38■■■□□ 2.13
COPE-202ENST00000349893 SUPT5HO00267 1087 aaKnown RBP28.37■■■□□ 2.13
COPE-202ENST00000349893 NPM1P06748 294 aaKnown RBP eCLIP28.33■■■□□ 2.13
COPE-202ENST00000349893 KIAA0586Q9BVV6 1533 aa28.27■■■□□ 2.12
COPE-202ENST00000349893 KDM6BO15054 1643 aa28.26■■■□□ 2.11
COPE-202ENST00000349893 KDM4FA0A1W2PPD8 638 aa28.24■■■□□ 2.11
COPE-202ENST00000349893 IGF1RP08069 1367 aa28.16■■■□□ 2.1
COPE-202ENST00000349893 CUL7Q14999 1698 aa28.15■■■□□ 2.1
COPE-202ENST00000349893 TSPOAP1O95153 1857 aa28.14■■■□□ 2.1
COPE-202ENST00000349893 KIF27Q86VH2 1401 aa28.08■■■□□ 2.09
COPE-202ENST00000349893 PTPRGP23470 1445 aa28.06■■■□□ 2.08
COPE-202ENST00000349893 ABCC2Q92887 1545 aa28.04■■■□□ 2.08
COPE-202ENST00000349893 GLI2P10070 1586 aa28.03■■■□□ 2.08
COPE-202ENST00000349893 PPRC1Q5VV67 1664 aaKnown RBP28.01■■■□□ 2.07
COPE-202ENST00000349893 TNIKQ9UKE5 1360 aa27.99■■■□□ 2.07
COPE-202ENST00000349893 PLB1Q6P1J6 1458 aa27.98■■■□□ 2.07
COPE-202ENST00000349893 ASXL2Q76L83 1435 aa27.97■■■□□ 2.07
COPE-202ENST00000349893 UHRF1BP1LA0JNW5 1464 aa27.96■■■□□ 2.07
COPE-202ENST00000349893 CARMIL2Q6F5E8 1435 aa27.96■■■□□ 2.07
COPE-202ENST00000349893 CARMIL1Q5VZK9 1371 aa27.93■■■□□ 2.06
COPE-202ENST00000349893 IQGAP2Q13576 1575 aa27.9■■■□□ 2.06
COPE-202ENST00000349893 ILDR1Q86SU0 546 aaPredicted RBP27.89■■■□□ 2.06
COPE-202ENST00000349893 ADGRL1O94910 1474 aa27.88■■■□□ 2.05
COPE-202ENST00000349893 UACAQ9BZF9 1416 aa27.85■■■□□ 2.05
COPE-202ENST00000349893 COL17A1Q9UMD9 1497 aaPredicted RBP27.84■■■□□ 2.05
COPE-202ENST00000349893 MAP3K4Q9Y6R4 1608 aa27.84■■■□□ 2.05
COPE-202ENST00000349893 DISP1Q96F81 1524 aa27.83■■■□□ 2.05
COPE-202ENST00000349893 KDM5BQ9UGL1 1544 aa27.83■■■□□ 2.05
COPE-202ENST00000349893 EPRSP07814 1512 aaKnown RBP27.82■■■□□ 2.04
COPE-202ENST00000349893 TTBK1Q5TCY1 1321 aaPredicted RBP27.79■■■□□ 2.04
COPE-202ENST00000349893 TEX14Q8IWB6 1497 aa27.76■■■□□ 2.04
COPE-202ENST00000349893 UGGT2Q9NYU1 1516 aa27.74■■■□□ 2.03
COPE-202ENST00000349893 ZCCHC11Q5TAX3 1644 aaKnown RBP27.72■■■□□ 2.03
COPE-202ENST00000349893 HECW2Q9P2P5 1572 aa27.69■■■□□ 2.02
COPE-202ENST00000349893 KIAA0556O60303 1618 aa27.67■■■□□ 2.02
COPE-202ENST00000349893 WDR7Q9Y4E6 1490 aa27.63■■■□□ 2.01
COPE-202ENST00000349893 RAPGEF2Q9Y4G8 1499 aa27.63■■■□□ 2.01
COPE-202ENST00000349893 MAGI3Q5TCQ9 1506 aa27.56■■■□□ 2
COPE-202ENST00000349893 CFAP43Q8NDM7 1665 aa27.52■■■□□ 2
COPE-202ENST00000349893 CD109Q6YHK3 1445 aa27.48■■□□□ 1.99
COPE-202ENST00000349893 ABCA8O94911 1581 aa27.47■■□□□ 1.99
COPE-202ENST00000349893 CTTNBP2Q8WZ74 1663 aa27.44■■□□□ 1.98
COPE-202ENST00000349893 GOLGA3Q08378 1498 aa27.42■■□□□ 1.98
COPE-202ENST00000349893 ARAP3Q8WWN8 1544 aa27.37■■□□□ 1.97
COPE-202ENST00000349893 KIF21BO75037 1637 aa27.35■■□□□ 1.97
COPE-202ENST00000349893 KCNH8Q96L42 1107 aa27.32■■□□□ 1.96
COPE-202ENST00000349893 PRXQ9BXM0 1461 aa27.25■■□□□ 1.95
COPE-202ENST00000349893 PHLDB1Q86UU1 1377 aa27.24■■□□□ 1.95
COPE-202ENST00000349893 ADAMTSL3P82987 1691 aa27.24■■□□□ 1.95
COPE-202ENST00000349893 FBXO41Q8TF61 875 aa27.23■■□□□ 1.95
COPE-202ENST00000349893 ABCA9Q8IUA7 1624 aa27.23■■□□□ 1.95
COPE-202ENST00000349893 ATP10BO94823 1461 aa27.21■■□□□ 1.95
COPE-202ENST00000349893 PTPRMP28827 1452 aa27.2■■□□□ 1.95
COPE-202ENST00000349893 NEO1Q92859 1461 aa27.14■■□□□ 1.94
COPE-202ENST00000349893 BCORL1Q5H9F3 1711 aa27.1■■□□□ 1.93
COPE-202ENST00000349893 FRMPD1Q5SYB0 1578 aa27.09■■□□□ 1.93
COPE-202ENST00000349893 PCF11O94913 1555 aaKnown RBP27.06■■□□□ 1.92
COPE-202ENST00000349893 SAMD9Q5K651 1589 aa27.06■■□□□ 1.92
COPE-202ENST00000349893 RAPGEF3O95398 923 aa27.06■■□□□ 1.92
COPE-202ENST00000349893 FAM9AQ8IZU1 332 aaPredicted RBP27.06■■□□□ 1.92
COPE-202ENST00000349893 MADDQ8WXG6 1647 aa27.04■■□□□ 1.92
COPE-202ENST00000349893 ARID3CA6NKF2 412 aa27.03■■□□□ 1.92
COPE-202ENST00000349893 LMTK3Q96Q04 1460 aa27.03■■□□□ 1.92
COPE-202ENST00000349893 RAPGEF6Q8TEU7 1601 aa27.02■■□□□ 1.92
COPE-202ENST00000349893 P3H3Q8IVL6 736 aa26.98■■□□□ 1.91
COPE-202ENST00000349893 ARHGEF40Q8TER5 1519 aa26.98■■□□□ 1.91
COPE-202ENST00000349893 NUP153P49790 1475 aaKnown RBP26.95■■□□□ 1.91
COPE-202ENST00000349893 RICTORQ6R327 1708 aa26.93■■□□□ 1.9
COPE-202ENST00000349893 FHOD3Q2V2M9 1422 aa26.9■■□□□ 1.9
COPE-202ENST00000349893 ARID4BQ4LE39 1312 aaPredicted RBP26.9■■□□□ 1.9
COPE-202ENST00000349893 RIMS1Q86UR5 1692 aaKnown RBP26.89■■□□□ 1.9
COPE-202ENST00000349893 DENND4BO75064 1496 aaPredicted RBP26.89■■□□□ 1.9
COPE-202ENST00000349893 ZMYM4Q5VZL5 1548 aa26.86■■□□□ 1.89
COPE-202ENST00000349893 CFAP74Q9C0B2 1584 aa26.85■■□□□ 1.89
COPE-202ENST00000349893 AKNAQ7Z591 1439 aa26.84■■□□□ 1.89
COPE-202ENST00000349893 FANCAO15360 1455 aa26.82■■□□□ 1.88
COPE-202ENST00000349893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.82■■□□□ 1.88
COPE-202ENST00000349893 HNRNPUL2Q1KMD3 747 aaKnown RBP26.82■■□□□ 1.88
COPE-202ENST00000349893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.8■■□□□ 1.882e-7■□□□□ 9.6
COPE-202ENST00000349893 CSRNP3Q8WYN3 585 aa26.8■■□□□ 1.88
COPE-202ENST00000349893 POGZQ7Z3K3 1410 aa26.8■■□□□ 1.88
COPE-202ENST00000349893 SIGLEC1Q9BZZ2 1709 aa26.79■■□□□ 1.88
COPE-202ENST00000349893 MAGI2Q86UL8 1455 aa26.78■■□□□ 1.88
COPE-202ENST00000349893 EFCAB5A4FU69 1503 aa26.77■■□□□ 1.88
COPE-202ENST00000349893 PLEKHD1A6NEE1 506 aa26.77■■□□□ 1.88
COPE-202ENST00000349893 ZFYVE16Q7Z3T8 1539 aa26.76■■□□□ 1.87
COPE-202ENST00000349893 TTC37Q6PGP7 1564 aa26.75■■□□□ 1.87
COPE-202ENST00000349893 HSPA2P54652 639 aa26.74■■□□□ 1.87
COPE-202ENST00000349893 YEATS2Q9ULM3 1422 aa26.73■■□□□ 1.87
COPE-202ENST00000349893 HECW1Q76N89 1606 aa26.68■■□□□ 1.86
COPE-202ENST00000349893 FER1L4A9Z1Z3 1794 aa26.68■■□□□ 1.86
COPE-202ENST00000349893 CERKQ8TCT0 537 aa26.67■■□□□ 1.86
COPE-202ENST00000349893 EEA1Q15075 1411 aa26.66■■□□□ 1.86
COPE-202ENST00000349893 ARHGEF12Q9NZN5 1544 aa26.65■■□□□ 1.86
COPE-202ENST00000349893 PLCH2O75038 1416 aa26.63■■□□□ 1.85
COPE-202ENST00000349893 SCAPERQ9BY12 1400 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms