RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 FHAD1B1AJZ9 1412 aa30.79■■■□□ 2.52
CHRNA3-202ENST00000348639 P3H3Q8IVL6 736 aa30.78■■■□□ 2.52
CHRNA3-202ENST00000348639 HNRNPUL2Q1KMD3 747 aaKnown RBP30.78■■■□□ 2.52
CHRNA3-202ENST00000348639 ERCC6Q03468 1493 aa30.77■■■□□ 2.52
CHRNA3-202ENST00000348639 WDR62O43379 1518 aa30.75■■■□□ 2.51
CHRNA3-202ENST00000348639 AQRO60306 1485 aaKnown RBP eCLIP30.75■■■□□ 2.51
CHRNA3-202ENST00000348639 TIAM1Q13009 1591 aa30.71■■■□□ 2.51
CHRNA3-202ENST00000348639 PBRM1Q86U86 1689 aa30.7■■■□□ 2.5
CHRNA3-202ENST00000348639 RRBP1Q9P2E9 1410 aaKnown RBP30.69■■■□□ 2.5
CHRNA3-202ENST00000348639 IFT140Q96RY7 1462 aa30.66■■■□□ 2.5
CHRNA3-202ENST00000348639 FHOD3Q2V2M9 1422 aa30.66■■■□□ 2.5
CHRNA3-202ENST00000348639 PCF11O94913 1555 aaKnown RBP30.64■■■□□ 2.5
CHRNA3-202ENST00000348639 ZNF608Q9ULD9 1512 aaPredicted RBP30.62■■■□□ 2.49
CHRNA3-202ENST00000348639 GRIN2BQ13224 1484 aa30.59■■■□□ 2.49
CHRNA3-202ENST00000348639 LRRC9Q6ZRR7 1453 aa30.59■■■□□ 2.49
CHRNA3-202ENST00000348639 FYCO1Q9BQS8 1478 aa30.59■■■□□ 2.49
CHRNA3-202ENST00000348639 ATP1B4Q9UN42 357 aaPredicted RBP30.58■■■□□ 2.49
CHRNA3-202ENST00000348639 CASKIN1Q8WXD9 1431 aa30.57■■■□□ 2.48
CHRNA3-202ENST00000348639 CFAP43Q8NDM7 1665 aa30.57■■■□□ 2.48
CHRNA3-202ENST00000348639 SAMD9Q5K651 1589 aa30.57■■■□□ 2.48
CHRNA3-202ENST00000348639 THOC2Q8NI27 1593 aaKnown RBP30.56■■■□□ 2.48
CHRNA3-202ENST00000348639 FMN1Q68DA7 1419 aa30.56■■■□□ 2.48
CHRNA3-202ENST00000348639 CCNB3Q8WWL7 1395 aa30.55■■■□□ 2.48
CHRNA3-202ENST00000348639 ADAMTS12P58397 1594 aa30.54■■■□□ 2.48
CHRNA3-202ENST00000348639 SNAPC4Q5SXM2 1469 aa30.45■■■□□ 2.46
CHRNA3-202ENST00000348639 EIF4G3O43432 1585 aaKnown RBP30.44■■■□□ 2.46
CHRNA3-202ENST00000348639 PHLDB1Q86UU1 1377 aa30.38■■■□□ 2.45
CHRNA3-202ENST00000348639 IQGAP2Q13576 1575 aa30.37■■■□□ 2.45
CHRNA3-202ENST00000348639 CLSPNQ9HAW4 1339 aa30.28■■■□□ 2.44
CHRNA3-202ENST00000348639 DHX57Q6P158 1386 aaKnown RBP30.25■■■□□ 2.43
CHRNA3-202ENST00000348639 ITGAEP38570 1179 aa30.25■■■□□ 2.43
CHRNA3-202ENST00000348639 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
CHRNA3-202ENST00000348639 UGGT2Q9NYU1 1516 aa30.24■■■□□ 2.43
CHRNA3-202ENST00000348639 MAGI1Q96QZ7 1491 aaPredicted RBP30.23■■■□□ 2.43
CHRNA3-202ENST00000348639 LRRIQ1Q96JM4 1722 aa30.23■■■□□ 2.43
CHRNA3-202ENST00000348639 KIAA0586Q9BVV6 1533 aa30.22■■■□□ 2.43
CHRNA3-202ENST00000348639 CHMP7Q8WUX9 453 aaPredicted RBP30.21■■■□□ 2.43
CHRNA3-202ENST00000348639 MTUS2Q5JR59 1369 aa30.2■■■□□ 2.43
CHRNA3-202ENST00000348639 FBLN2P98095 1184 aa30.18■■■□□ 2.42
CHRNA3-202ENST00000348639 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.18■■■□□ 2.42
CHRNA3-202ENST00000348639 FAM50AQ14320 339 aaKnown RBP30.15■■■□□ 2.42
CHRNA3-202ENST00000348639 SYNJ2O15056 1496 aa30.15■■■□□ 2.42
CHRNA3-202ENST00000348639 CCDC18Q5T9S5 1454 aa30.15■■■□□ 2.42
CHRNA3-202ENST00000348639 HECW1Q76N89 1606 aa30.12■■■□□ 2.41
CHRNA3-202ENST00000348639 EHBP1L1Q8N3D4 1523 aa30.11■■■□□ 2.41
CHRNA3-202ENST00000348639 FGD6Q6ZV73 1430 aa30.09■■■□□ 2.41
CHRNA3-202ENST00000348639 RAB3GAP2Q9H2M9 1393 aa30.09■■■□□ 2.41
CHRNA3-202ENST00000348639 SETD5Q9C0A6 1442 aa30.08■■■□□ 2.41
CHRNA3-202ENST00000348639 DISP1Q96F81 1524 aa30.06■■■□□ 2.4
CHRNA3-202ENST00000348639 NCOA2Q15596 1464 aa30.06■■■□□ 2.4
CHRNA3-202ENST00000348639 KIAA0556O60303 1618 aa30.06■■■□□ 2.4
CHRNA3-202ENST00000348639 CEP170Q5SW79 1584 aa30.05■■■□□ 2.4
CHRNA3-202ENST00000348639 SUPT6HQ7KZ85 1726 aaKnown RBP30.05■■■□□ 2.4
CHRNA3-202ENST00000348639 EPRSP07814 1512 aaKnown RBP30.03■■■□□ 2.4
CHRNA3-202ENST00000348639 ZNF316A6NFI3 1004 aaPredicted RBP30.01■■■□□ 2.4
CHRNA3-202ENST00000348639 MAGI3Q5TCQ9 1506 aa30.01■■■□□ 2.39
CHRNA3-202ENST00000348639 MYOM3Q5VTT5 1437 aa30■■■□□ 2.39
CHRNA3-202ENST00000348639 ARHGEF11O15085 1522 aa29.99■■■□□ 2.39
CHRNA3-202ENST00000348639 ARID3CA6NKF2 412 aa29.98■■■□□ 2.39
CHRNA3-202ENST00000348639 NUP160Q12769 1436 aa29.95■■■□□ 2.38
CHRNA3-202ENST00000348639 DIEXFQ68CQ4 756 aaKnown RBP29.95■■■□□ 2.38
CHRNA3-202ENST00000348639 CDK13Q14004 1512 aaKnown RBP29.93■■■□□ 2.38
CHRNA3-202ENST00000348639 JPH4Q96JJ6 628 aa29.89■■■□□ 2.38
CHRNA3-202ENST00000348639 RAPGEF6Q8TEU7 1601 aa29.85■■■□□ 2.37
CHRNA3-202ENST00000348639 MAPKBP1O60336 1514 aa29.85■■■□□ 2.37
CHRNA3-202ENST00000348639 PTPN23Q9H3S7 1636 aa29.84■■■□□ 2.37
CHRNA3-202ENST00000348639 NUP153P49790 1475 aaKnown RBP29.84■■■□□ 2.37
CHRNA3-202ENST00000348639 CARMIL2Q6F5E8 1435 aa29.83■■■□□ 2.37
CHRNA3-202ENST00000348639 PTPRKQ15262 1439 aa29.81■■■□□ 2.36
CHRNA3-202ENST00000348639 TCOF1Q13428 1488 aaKnown RBP29.81■■■□□ 2.36
CHRNA3-202ENST00000348639 HFM1A2PYH4 1435 aa29.78■■■□□ 2.36
CHRNA3-202ENST00000348639 MIA2Q96PC5 1412 aa29.77■■■□□ 2.36
CHRNA3-202ENST00000348639 PLB1Q6P1J6 1458 aa29.74■■■□□ 2.35
CHRNA3-202ENST00000348639 CDK11AQ9UQ88 783 aaPredicted RBP29.72■■■□□ 2.35
CHRNA3-202ENST00000348639 CHD1O14646 1710 aa29.69■■■□□ 2.34
CHRNA3-202ENST00000348639 NAIPQ13075 1403 aa29.68■■■□□ 2.34
CHRNA3-202ENST00000348639 PRG4Q92954 1404 aaPredicted RBP29.62■■■□□ 2.33
CHRNA3-202ENST00000348639 TROQ12816 1431 aaPredicted RBP29.61■■■□□ 2.33
CHRNA3-202ENST00000348639 UACAQ9BZF9 1416 aa29.61■■■□□ 2.33
CHRNA3-202ENST00000348639 AKNAQ7Z591 1439 aa29.59■■■□□ 2.33
CHRNA3-202ENST00000348639 ABCA8O94911 1581 aa29.57■■■□□ 2.32
CHRNA3-202ENST00000348639 TIMELESSQ9UNS1 1208 aa29.56■■■□□ 2.32
CHRNA3-202ENST00000348639 SIN3AQ96ST3 1273 aa29.54■■■□□ 2.32
CHRNA3-202ENST00000348639 CHIC2Q9UKJ5 165 aa29.54■■■□□ 2.32
CHRNA3-202ENST00000348639 GCC2Q8IWJ2 1684 aa29.53■■■□□ 2.32
CHRNA3-202ENST00000348639 ADCY10Q96PN6 1610 aa29.51■■■□□ 2.32
CHRNA3-202ENST00000348639 PTPRGP23470 1445 aa29.5■■■□□ 2.31
CHRNA3-202ENST00000348639 RRP7BPQ9NSQ0 103 aa29.49■■■□□ 2.31
CHRNA3-202ENST00000348639 NEUROD1Q13562 356 aa29.49■■■□□ 2.31
CHRNA3-202ENST00000348639 DAPK1P53355 1430 aa29.47■■■□□ 2.31
CHRNA3-202ENST00000348639 DNMT1P26358 1616 aaKnown RBP29.46■■■□□ 2.31
CHRNA3-202ENST00000348639 ZNF644Q9H582 1327 aaPredicted RBP29.45■■■□□ 2.3
CHRNA3-202ENST00000348639 ATP10BO94823 1461 aa29.44■■■□□ 2.3
CHRNA3-202ENST00000348639 ROCK1Q13464 1354 aa29.44■■■□□ 2.3
CHRNA3-202ENST00000348639 ITSN2Q9NZM3 1697 aa29.44■■■□□ 2.3
CHRNA3-202ENST00000348639 PLEKHD1A6NEE1 506 aa29.44■■■□□ 2.3
CHRNA3-202ENST00000348639 KIF14Q15058 1648 aa29.43■■■□□ 2.3
CHRNA3-202ENST00000348639 ABCC5O15440 1437 aa29.43■■■□□ 2.3
CHRNA3-202ENST00000348639 GPATCH8Q9UKJ3 1502 aaKnown RBP29.42■■■□□ 2.3
CHRNA3-202ENST00000348639 SHROOM2Q13796 1616 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms