RNA–Protein interactions for RNA: ENST00000348419.7

CNN2-202, Transcript of calponin 2, humanhuman

TSL 2 BASIC

Gene CNN2, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-202ENST00000348419 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
CNN2-202ENST00000348419 ARHGAP35Q9NRY4 1499 aa21.24■□□□□ 0.99
CNN2-202ENST00000348419 PBRM1Q86U86 1689 aa21.24■□□□□ 0.99
CNN2-202ENST00000348419 FHAD1B1AJZ9 1412 aa21.22■□□□□ 0.99
CNN2-202ENST00000348419 CTTNBP2Q8WZ74 1663 aa21.2■□□□□ 0.98
CNN2-202ENST00000348419 EFCAB5A4FU69 1503 aa21.18■□□□□ 0.98
CNN2-202ENST00000348419 AQRO60306 1485 aaKnown RBP eCLIP21.17■□□□□ 0.981e-6■■■□□ 18.2
CNN2-202ENST00000348419 ADAMTS12P58397 1594 aa21.16■□□□□ 0.98
CNN2-202ENST00000348419 HNRNPUL2Q1KMD3 747 aaKnown RBP21.13■□□□□ 0.97
CNN2-202ENST00000348419 ZNF608Q9ULD9 1512 aaPredicted RBP21.12■□□□□ 0.97
CNN2-202ENST00000348419 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
CNN2-202ENST00000348419 MAP3K1Q13233 1512 aa21.08■□□□□ 0.97
CNN2-202ENST00000348419 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
CNN2-202ENST00000348419 KANK4Q5T7N3 995 aaPredicted RBP21.04■□□□□ 0.96
CNN2-202ENST00000348419 SAMD9Q5K651 1589 aa21.03■□□□□ 0.96
CNN2-202ENST00000348419 SNAPC4Q5SXM2 1469 aa21■□□□□ 0.95
CNN2-202ENST00000348419 FMN1Q68DA7 1419 aa20.97■□□□□ 0.95
CNN2-202ENST00000348419 IQGAP2Q13576 1575 aa20.97■□□□□ 0.95
CNN2-202ENST00000348419 SYNJ2O15056 1496 aa20.96■□□□□ 0.95
CNN2-202ENST00000348419 GRIN2AQ12879 1464 aa20.96■□□□□ 0.95
CNN2-202ENST00000348419 KIAA0586Q9BVV6 1533 aa20.95■□□□□ 0.94
CNN2-202ENST00000348419 FYCO1Q9BQS8 1478 aa20.94■□□□□ 0.94
CNN2-202ENST00000348419 CASKIN1Q8WXD9 1431 aa20.93■□□□□ 0.94
CNN2-202ENST00000348419 UGGT2Q9NYU1 1516 aa20.92■□□□□ 0.94
CNN2-202ENST00000348419 FHOD3Q2V2M9 1422 aa20.91■□□□□ 0.94
CNN2-202ENST00000348419 TIAM1Q13009 1591 aa20.91■□□□□ 0.94
CNN2-202ENST00000348419 PCF11O94913 1555 aaKnown RBP20.88■□□□□ 0.93
CNN2-202ENST00000348419 CFAP43Q8NDM7 1665 aa20.86■□□□□ 0.93
CNN2-202ENST00000348419 RRBP1Q9P2E9 1410 aaKnown RBP20.85■□□□□ 0.93
CNN2-202ENST00000348419 NUP160Q12769 1436 aa20.84■□□□□ 0.93
CNN2-202ENST00000348419 DIEXFQ68CQ4 756 aaKnown RBP20.83■□□□□ 0.93
CNN2-202ENST00000348419 CHMP7Q8WUX9 453 aaPredicted RBP20.83■□□□□ 0.92
CNN2-202ENST00000348419 LRRC9Q6ZRR7 1453 aa20.81■□□□□ 0.92
CNN2-202ENST00000348419 P3H3Q8IVL6 736 aa20.81■□□□□ 0.92
CNN2-202ENST00000348419 ZNF316A6NFI3 1004 aaPredicted RBP20.78■□□□□ 0.92
CNN2-202ENST00000348419 CEP170Q5SW79 1584 aa20.78■□□□□ 0.92
CNN2-202ENST00000348419 CCNB3Q8WWL7 1395 aa20.77■□□□□ 0.92
CNN2-202ENST00000348419 KIAA0556O60303 1618 aa20.74■□□□□ 0.91
CNN2-202ENST00000348419 DISP1Q96F81 1524 aa20.74■□□□□ 0.91
CNN2-202ENST00000348419 CCDC18Q5T9S5 1454 aa20.73■□□□□ 0.91
CNN2-202ENST00000348419 DHX57Q6P158 1386 aaKnown RBP20.71■□□□□ 0.91
CNN2-202ENST00000348419 HECW1Q76N89 1606 aa20.7■□□□□ 0.9
CNN2-202ENST00000348419 CLSPNQ9HAW4 1339 aa20.7■□□□□ 0.9
CNN2-202ENST00000348419 CARMIL2Q6F5E8 1435 aa20.67■□□□□ 0.9
CNN2-202ENST00000348419 ITGAEP38570 1179 aa20.66■□□□□ 0.9
CNN2-202ENST00000348419 ATP1B4Q9UN42 357 aaPredicted RBP20.66■□□□□ 0.9
CNN2-202ENST00000348419 FBLN2P98095 1184 aa20.63■□□□□ 0.89
CNN2-202ENST00000348419 PHLDB1Q86UU1 1377 aa20.63■□□□□ 0.89
CNN2-202ENST00000348419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.63■□□□□ 0.891e-6■□□□□ 11.1
CNN2-202ENST00000348419 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
CNN2-202ENST00000348419 LRRIQ1Q96JM4 1722 aa20.63■□□□□ 0.89
CNN2-202ENST00000348419 EHBP1L1Q8N3D4 1523 aa20.62■□□□□ 0.89
CNN2-202ENST00000348419 EPRSP07814 1512 aaKnown RBP20.6■□□□□ 0.89
CNN2-202ENST00000348419 MTUS2Q5JR59 1369 aa20.59■□□□□ 0.89
CNN2-202ENST00000348419 CHD1O14646 1710 aa20.58■□□□□ 0.88
CNN2-202ENST00000348419 RAPGEF6Q8TEU7 1601 aa20.57■□□□□ 0.88
CNN2-202ENST00000348419 SUPT6HQ7KZ85 1726 aaKnown RBP20.55■□□□□ 0.88
CNN2-202ENST00000348419 ARHGEF11O15085 1522 aa20.54■□□□□ 0.88
CNN2-202ENST00000348419 FAM50AQ14320 339 aaKnown RBP20.53■□□□□ 0.88
CNN2-202ENST00000348419 RAB3GAP2Q9H2M9 1393 aa20.53■□□□□ 0.88
CNN2-202ENST00000348419 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
CNN2-202ENST00000348419 SCAF1Q9H7N4 1312 aaKnown RBP20.51■□□□□ 0.87
CNN2-202ENST00000348419 NUP153P49790 1475 aaKnown RBP20.51■□□□□ 0.87
CNN2-202ENST00000348419 NCOA2Q15596 1464 aa20.5■□□□□ 0.87
CNN2-202ENST00000348419 SETD5Q9C0A6 1442 aa20.48■□□□□ 0.87
CNN2-202ENST00000348419 MYOM3Q5VTT5 1437 aa20.47■□□□□ 0.87
CNN2-202ENST00000348419 FGD6Q6ZV73 1430 aa20.47■□□□□ 0.87
CNN2-202ENST00000348419 MAGI3Q5TCQ9 1506 aa20.47■□□□□ 0.87
CNN2-202ENST00000348419 ACIN1Q9UKV3 1341 aaKnown RBP20.47■□□□□ 0.87
CNN2-202ENST00000348419 CDK11AQ9UQ88 783 aaPredicted RBP20.46■□□□□ 0.87
CNN2-202ENST00000348419 PRG4Q92954 1404 aaPredicted RBP20.46■□□□□ 0.87
CNN2-202ENST00000348419 ABCA8O94911 1581 aa20.46■□□□□ 0.87
CNN2-202ENST00000348419 NEUROD1Q13562 356 aa20.44■□□□□ 0.86
CNN2-202ENST00000348419 CDK13Q14004 1512 aaKnown RBP20.44■□□□□ 0.86
CNN2-202ENST00000348419 CLASP1Q7Z460 1538 aa20.44■□□□□ 0.86
CNN2-202ENST00000348419 MIER1Q8N108 512 aa20.42■□□□□ 0.86
CNN2-202ENST00000348419 MIA2Q96PC5 1412 aa20.41■□□□□ 0.86
CNN2-202ENST00000348419 PLB1Q6P1J6 1458 aa20.41■□□□□ 0.86
CNN2-202ENST00000348419 CENPBP07199 599 aaPredicted RBP20.39■□□□□ 0.86
CNN2-202ENST00000348419 MAPKBP1O60336 1514 aa20.39■□□□□ 0.85
CNN2-202ENST00000348419 TCOF1Q13428 1488 aaKnown RBP20.39■□□□□ 0.85
CNN2-202ENST00000348419 PTPRGP23470 1445 aa20.39■□□□□ 0.85
CNN2-202ENST00000348419 TROQ12816 1431 aaPredicted RBP20.37■□□□□ 0.85
CNN2-202ENST00000348419 ADCY10Q96PN6 1610 aa20.34■□□□□ 0.85
CNN2-202ENST00000348419 PTPN23Q9H3S7 1636 aa20.33■□□□□ 0.84
CNN2-202ENST00000348419 UACAQ9BZF9 1416 aa20.3■□□□□ 0.84
CNN2-202ENST00000348419 ATP10BO94823 1461 aa20.3■□□□□ 0.84
CNN2-202ENST00000348419 SIN3AQ96ST3 1273 aa20.26■□□□□ 0.83
CNN2-202ENST00000348419 YTHDC1Q96MU7 727 aaKnown RBP20.26■□□□□ 0.83
CNN2-202ENST00000348419 PTPRKQ15262 1439 aa20.25■□□□□ 0.83
CNN2-202ENST00000348419 PLEKHD1A6NEE1 506 aa20.24■□□□□ 0.83
CNN2-202ENST00000348419 AKNAQ7Z591 1439 aa20.24■□□□□ 0.83
CNN2-202ENST00000348419 UHRF1BP1LA0JNW5 1464 aa20.24■□□□□ 0.83
CNN2-202ENST00000348419 ABCC2Q92887 1545 aa20.24■□□□□ 0.83
CNN2-202ENST00000348419 ITSN2Q9NZM3 1697 aa20.24■□□□□ 0.83
CNN2-202ENST00000348419 HFM1A2PYH4 1435 aa20.23■□□□□ 0.83
CNN2-202ENST00000348419 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
CNN2-202ENST00000348419 ERCC6L2Q5T890 1561 aa20.2■□□□□ 0.82
CNN2-202ENST00000348419 KIF14Q15058 1648 aa20.2■□□□□ 0.82
CNN2-202ENST00000348419 ARID3CA6NKF2 412 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms