RNA–Protein interactions for RNA: ENST00000348419.7

CNN2-202, Transcript of calponin 2, humanhuman

TSL 2 BASIC

Gene CNN2, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-202ENST00000348419 NISCHQ9Y2I1 1504 aa30.64■■■□□ 2.5
CNN2-202ENST00000348419 CCDC180Q9P1Z9 1646 aa26.71■■□□□ 1.87
CNN2-202ENST00000348419 ZCCHC6Q5VYS8 1495 aaKnown RBP25.78■■□□□ 1.72
CNN2-202ENST00000348419 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
CNN2-202ENST00000348419 MYO15BQ96JP2 1530 aa25.15■■□□□ 1.62
CNN2-202ENST00000348419 SHROOM4Q9ULL8 1493 aa25.05■■□□□ 1.6
CNN2-202ENST00000348419 DCAF8L2P0C7V8 631 aa25■■□□□ 1.59
CNN2-202ENST00000348419 ABCC9O60706 1549 aa24.89■■□□□ 1.57
CNN2-202ENST00000348419 NACADO15069 1562 aa24.84■■□□□ 1.57
CNN2-202ENST00000348419 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
CNN2-202ENST00000348419 SUPT5HO00267 1087 aaKnown RBP24.47■■□□□ 1.51
CNN2-202ENST00000348419 SCRIBQ14160 1630 aa24.38■■□□□ 1.49
CNN2-202ENST00000348419 UNC13AQ9UPW8 1703 aa23.95■■□□□ 1.42
CNN2-202ENST00000348419 RSF1Q96T23 1441 aaPredicted RBP23.8■■□□□ 1.4
CNN2-202ENST00000348419 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
CNN2-202ENST00000348419 CHIC1Q5VXU3 224 aa23.72■■□□□ 1.39
CNN2-202ENST00000348419 CECR2Q9BXF3 1484 aa23.69■■□□□ 1.38
CNN2-202ENST00000348419 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
CNN2-202ENST00000348419 MROH2BQ7Z745 1585 aa23.6■■□□□ 1.37
CNN2-202ENST00000348419 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
CNN2-202ENST00000348419 PABPN1Q86U42 306 aaKnown RBP eCLIP23.45■■□□□ 1.35
CNN2-202ENST00000348419 WIZO95785 1651 aa23.38■■□□□ 1.33
CNN2-202ENST00000348419 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
CNN2-202ENST00000348419 TOP2AP11388 1531 aaKnown RBP23.25■■□□□ 1.31
CNN2-202ENST00000348419 SMARCA2P51531 1590 aa23.12■■□□□ 1.29
CNN2-202ENST00000348419 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.28
CNN2-202ENST00000348419 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
CNN2-202ENST00000348419 LOC105371045A0A1W2PR82 267 aa22.97■■□□□ 1.27
CNN2-202ENST00000348419 CCDC88BA6NC98 1476 aa22.97■■□□□ 1.27
CNN2-202ENST00000348419 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
CNN2-202ENST00000348419 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
CNN2-202ENST00000348419 HMGXB3Q12766 1538 aa22.9■■□□□ 1.26
CNN2-202ENST00000348419 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
CNN2-202ENST00000348419 PCGF6Q9BYE7 350 aa22.66■■□□□ 1.22
CNN2-202ENST00000348419 FAM9AQ8IZU1 332 aaPredicted RBP22.6■■□□□ 1.21
CNN2-202ENST00000348419 CC2D2AQ9P2K1 1620 aa22.6■■□□□ 1.21
CNN2-202ENST00000348419 HRCP23327 699 aa22.5■■□□□ 1.19
CNN2-202ENST00000348419 ABCC8Q09428 1581 aa22.44■■□□□ 1.18
CNN2-202ENST00000348419 CFTRP13569 1480 aa22.42■■□□□ 1.18
CNN2-202ENST00000348419 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
CNN2-202ENST00000348419 EHMT2Q96KQ7 1210 aa22.36■■□□□ 1.17
CNN2-202ENST00000348419 TRIM26Q12899 539 aaPredicted RBP22.35■■□□□ 1.17
CNN2-202ENST00000348419 PRDM2Q13029 1718 aa22.31■■□□□ 1.16
CNN2-202ENST00000348419 CADPSQ9ULU8 1353 aa22.3■■□□□ 1.16
CNN2-202ENST00000348419 EEA1Q15075 1411 aa22.29■■□□□ 1.16
CNN2-202ENST00000348419 SYNJ1O43426 1573 aa22.24■■□□□ 1.15
CNN2-202ENST00000348419 AEBP2Q6ZN18 517 aaPredicted RBP22.24■■□□□ 1.15
CNN2-202ENST00000348419 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
CNN2-202ENST00000348419 BIVM-ERCC5R4GMW8 1640 aa22.21■■□□□ 1.15
CNN2-202ENST00000348419 LAMC3Q9Y6N6 1575 aa22.1■■□□□ 1.13
CNN2-202ENST00000348419 SOGA1O94964 1423 aa22.08■■□□□ 1.13
CNN2-202ENST00000348419 CUX1P39880 1505 aa22.07■■□□□ 1.12
CNN2-202ENST00000348419 PPARGC1BQ86YN6 1023 aaKnown RBP22.02■■□□□ 1.12
CNN2-202ENST00000348419 CSRNP3Q8WYN3 585 aa22.02■■□□□ 1.12
CNN2-202ENST00000348419 FANCD2Q9BXW9 1451 aa22■■□□□ 1.11
CNN2-202ENST00000348419 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
CNN2-202ENST00000348419 KIF21BO75037 1637 aa21.91■■□□□ 1.1
CNN2-202ENST00000348419 PDS5BQ9NTI5 1447 aa21.91■■□□□ 1.1
CNN2-202ENST00000348419 NESP48681 1621 aa21.9■■□□□ 1.1
CNN2-202ENST00000348419 CEP164Q9UPV0 1460 aa21.89■■□□□ 1.09
CNN2-202ENST00000348419 GOLGA3Q08378 1498 aa21.88■■□□□ 1.09
CNN2-202ENST00000348419 TNIKQ9UKE5 1360 aa21.88■■□□□ 1.09
CNN2-202ENST00000348419 DNMBPQ6XZF7 1577 aa21.88■■□□□ 1.09
CNN2-202ENST00000348419 KIF27Q86VH2 1401 aa21.85■■□□□ 1.09
CNN2-202ENST00000348419 CEP162Q5TB80 1403 aa21.84■■□□□ 1.09
CNN2-202ENST00000348419 DNAJC5BQ9UF47 199 aa21.82■■□□□ 1.08
CNN2-202ENST00000348419 UBTFP17480 764 aaKnown RBP21.8■■□□□ 1.08
CNN2-202ENST00000348419 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
CNN2-202ENST00000348419 TOPBP1Q92547 1522 aa21.79■■□□□ 1.08
CNN2-202ENST00000348419 ERICH3Q5RHP9 1530 aa21.77■■□□□ 1.08
CNN2-202ENST00000348419 PRXQ9BXM0 1461 aa21.75■■□□□ 1.07
CNN2-202ENST00000348419 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
CNN2-202ENST00000348419 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.06
CNN2-202ENST00000348419 ABCA10Q8WWZ4 1543 aa21.69■■□□□ 1.06
CNN2-202ENST00000348419 POLA1P09884 1462 aaPredicted RBP21.69■■□□□ 1.06
CNN2-202ENST00000348419 CUX2O14529 1486 aa21.68■■□□□ 1.06
CNN2-202ENST00000348419 KIF21AQ7Z4S6 1674 aa21.67■■□□□ 1.06
CNN2-202ENST00000348419 RAPGEF2Q9Y4G8 1499 aa21.66■■□□□ 1.06
CNN2-202ENST00000348419 IGF1RP08069 1367 aa21.61■■□□□ 1.05
CNN2-202ENST00000348419 MRC2Q9UBG0 1479 aa21.59■■□□□ 1.05
CNN2-202ENST00000348419 TTBK1Q5TCY1 1321 aaPredicted RBP21.57■■□□□ 1.04
CNN2-202ENST00000348419 WDR97A6NE52 1622 aa21.57■■□□□ 1.04
CNN2-202ENST00000348419 RAD54L2Q9Y4B4 1467 aa21.55■■□□□ 1.04
CNN2-202ENST00000348419 CARMIL1Q5VZK9 1371 aa21.5■■□□□ 1.03
CNN2-202ENST00000348419 CLIP1P30622 1438 aa21.5■■□□□ 1.03
CNN2-202ENST00000348419 WDR62O43379 1518 aa21.48■■□□□ 1.03
CNN2-202ENST00000348419 CUL7Q14999 1698 aa21.48■■□□□ 1.03
CNN2-202ENST00000348419 ABCA5Q8WWZ7 1642 aa21.47■■□□□ 1.03
CNN2-202ENST00000348419 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
CNN2-202ENST00000348419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.46■■□□□ 1.03
CNN2-202ENST00000348419 CCER1Q8TC90 406 aaPredicted RBP21.4■■□□□ 1.02
CNN2-202ENST00000348419 GAPVD1Q14C86 1478 aa21.4■■□□□ 1.02
CNN2-202ENST00000348419 VPS8Q8N3P4 1428 aa21.38■■□□□ 1.01
CNN2-202ENST00000348419 IFT140Q96RY7 1462 aa21.38■■□□□ 1.01
CNN2-202ENST00000348419 RANGAP1P46060 587 aaPredicted RBP21.38■■□□□ 1.01
CNN2-202ENST00000348419 ERCC6Q03468 1493 aa21.37■■□□□ 1.01
CNN2-202ENST00000348419 THOC2Q8NI27 1593 aaKnown RBP21.34■■□□□ 1.01
CNN2-202ENST00000348419 TDRD9Q8NDG6 1382 aaKnown RBP21.32■■□□□ 1
CNN2-202ENST00000348419 APLP2Q06481 763 aa21.27■■□□□ 1
CNN2-202ENST00000348419 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms