RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 HNRNPUL2Q1KMD3 747 aaKnown RBP32.12■■■□□ 2.73
PTPN18-202ENST00000347849 AQRO60306 1485 aaKnown RBP eCLIP32.11■■■□□ 2.732e-12■■■■■ 52
PTPN18-202ENST00000347849 ACIN1Q9UKV3 1341 aaKnown RBP32.04■■■□□ 2.72
PTPN18-202ENST00000347849 FHOD3Q2V2M9 1422 aa32.03■■■□□ 2.72
PTPN18-202ENST00000347849 WDR62O43379 1518 aa32.01■■■□□ 2.71
PTPN18-202ENST00000347849 CTTNBP2Q8WZ74 1663 aa31.99■■■□□ 2.71
PTPN18-202ENST00000347849 NEUROD1Q13562 356 aa31.99■■■□□ 2.71
PTPN18-202ENST00000347849 ZNF608Q9ULD9 1512 aaPredicted RBP31.99■■■□□ 2.71
PTPN18-202ENST00000347849 ERCC6Q03468 1493 aa31.97■■■□□ 2.71
PTPN18-202ENST00000347849 DIEXFQ68CQ4 756 aaKnown RBP31.95■■■□□ 2.71
PTPN18-202ENST00000347849 PBRM1Q86U86 1689 aa31.92■■■□□ 2.7
PTPN18-202ENST00000347849 IFT140Q96RY7 1462 aa31.9■■■□□ 2.7
PTPN18-202ENST00000347849 ATP1B4Q9UN42 357 aaPredicted RBP31.89■■■□□ 2.7
PTPN18-202ENST00000347849 PCF11O94913 1555 aaKnown RBP31.89■■■□□ 2.7
PTPN18-202ENST00000347849 FHAD1B1AJZ9 1412 aa31.89■■■□□ 2.7
PTPN18-202ENST00000347849 EFCAB5A4FU69 1503 aa31.88■■■□□ 2.69
PTPN18-202ENST00000347849 TIAM1Q13009 1591 aa31.88■■■□□ 2.69
PTPN18-202ENST00000347849 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
PTPN18-202ENST00000347849 ADAMTS12P58397 1594 aa31.82■■■□□ 2.68
PTPN18-202ENST00000347849 THOC2Q8NI27 1593 aaKnown RBP31.81■■■□□ 2.68
PTPN18-202ENST00000347849 MAP3K1Q13233 1512 aa31.8■■■□□ 2.68
PTPN18-202ENST00000347849 RRBP1Q9P2E9 1410 aaKnown RBP31.79■■■□□ 2.68
PTPN18-202ENST00000347849 LRRC9Q6ZRR7 1453 aa31.78■■■□□ 2.68
PTPN18-202ENST00000347849 SAMD9Q5K651 1589 aa31.76■■■□□ 2.67
PTPN18-202ENST00000347849 CENPBP07199 599 aaPredicted RBP31.75■■■□□ 2.67
PTPN18-202ENST00000347849 GTF3C3Q9Y5Q9 886 aa31.75■■■□□ 2.67
PTPN18-202ENST00000347849 CASKIN1Q8WXD9 1431 aa31.74■■■□□ 2.67
PTPN18-202ENST00000347849 FYCO1Q9BQS8 1478 aa31.71■■■□□ 2.67
PTPN18-202ENST00000347849 CCNB3Q8WWL7 1395 aa31.7■■■□□ 2.67
PTPN18-202ENST00000347849 EIF4G3O43432 1585 aaKnown RBP31.7■■■□□ 2.66
PTPN18-202ENST00000347849 FMN1Q68DA7 1419 aa31.69■■■□□ 2.66
PTPN18-202ENST00000347849 SNAPC4Q5SXM2 1469 aa31.69■■■□□ 2.66
PTPN18-202ENST00000347849 CFAP43Q8NDM7 1665 aa31.68■■■□□ 2.66
PTPN18-202ENST00000347849 PHLDB1Q86UU1 1377 aa31.67■■■□□ 2.66
PTPN18-202ENST00000347849 ITGAEP38570 1179 aa31.63■■■□□ 2.65
PTPN18-202ENST00000347849 IQGAP2Q13576 1575 aa31.61■■■□□ 2.65
PTPN18-202ENST00000347849 ZNF316A6NFI3 1004 aaPredicted RBP31.54■■■□□ 2.64
PTPN18-202ENST00000347849 LRRIQ1Q96JM4 1722 aa31.52■■■□□ 2.64
PTPN18-202ENST00000347849 GRIN2AQ12879 1464 aa31.51■■■□□ 2.64
PTPN18-202ENST00000347849 FBLN2P98095 1184 aa31.46■■■□□ 2.63
PTPN18-202ENST00000347849 FAM50AQ14320 339 aaKnown RBP31.45■■■□□ 2.63
PTPN18-202ENST00000347849 KIAA0586Q9BVV6 1533 aa31.45■■■□□ 2.62
PTPN18-202ENST00000347849 CHMP7Q8WUX9 453 aaPredicted RBP31.44■■■□□ 2.62
PTPN18-202ENST00000347849 MAGI1Q96QZ7 1491 aaPredicted RBP31.43■■■□□ 2.62
PTPN18-202ENST00000347849 UGGT2Q9NYU1 1516 aa31.43■■■□□ 2.62
PTPN18-202ENST00000347849 MTUS2Q5JR59 1369 aa31.42■■■□□ 2.62
PTPN18-202ENST00000347849 DHX57Q6P158 1386 aaKnown RBP31.4■■■□□ 2.62
PTPN18-202ENST00000347849 SYNJ2O15056 1496 aa31.38■■■□□ 2.61
PTPN18-202ENST00000347849 ARID3CA6NKF2 412 aa31.37■■■□□ 2.61
PTPN18-202ENST00000347849 DISP1Q96F81 1524 aa31.37■■■□□ 2.61
PTPN18-202ENST00000347849 CEP170Q5SW79 1584 aa31.35■■■□□ 2.61
PTPN18-202ENST00000347849 MAGI3Q5TCQ9 1506 aa31.34■■■□□ 2.61
PTPN18-202ENST00000347849 YTHDC1Q96MU7 727 aaKnown RBP31.33■■■□□ 2.61
PTPN18-202ENST00000347849 KIAA0556O60303 1618 aa31.3■■■□□ 2.6
PTPN18-202ENST00000347849 RAB3GAP2Q9H2M9 1393 aa31.28■■■□□ 2.6
PTPN18-202ENST00000347849 NCOA2Q15596 1464 aa31.28■■■□□ 2.6
PTPN18-202ENST00000347849 CDK13Q14004 1512 aaKnown RBP31.27■■■□□ 2.6
PTPN18-202ENST00000347849 EPRSP07814 1512 aaKnown RBP31.26■■■□□ 2.6
PTPN18-202ENST00000347849 FGD6Q6ZV73 1430 aa31.26■■■□□ 2.6
PTPN18-202ENST00000347849 HECW1Q76N89 1606 aa31.25■■■□□ 2.59
PTPN18-202ENST00000347849 CCDC18Q5T9S5 1454 aa31.22■■■□□ 2.59
PTPN18-202ENST00000347849 MIER1Q8N108 512 aa31.22■■■□□ 2.59
PTPN18-202ENST00000347849 NUP160Q12769 1436 aa31.21■■■□□ 2.59
PTPN18-202ENST00000347849 EHBP1L1Q8N3D4 1523 aa31.21■■■□□ 2.59
PTPN18-202ENST00000347849 SETD5Q9C0A6 1442 aa31.18■■■□□ 2.58
PTPN18-202ENST00000347849 JPH4Q96JJ6 628 aa31.17■■■□□ 2.58
PTPN18-202ENST00000347849 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.16■■■□□ 2.586e-6■□□□□ 11
PTPN18-202ENST00000347849 MYOM3Q5VTT5 1437 aa31.16■■■□□ 2.58
PTPN18-202ENST00000347849 SUPT6HQ7KZ85 1726 aaKnown RBP31.15■■■□□ 2.58
PTPN18-202ENST00000347849 CLSPNQ9HAW4 1339 aa31.14■■■□□ 2.57
PTPN18-202ENST00000347849 ARHGEF11O15085 1522 aa31.13■■■□□ 2.57
PTPN18-202ENST00000347849 PTPRKQ15262 1439 aa31.12■■■□□ 2.57
PTPN18-202ENST00000347849 NUP153P49790 1475 aaKnown RBP31.12■■■□□ 2.57
PTPN18-202ENST00000347849 PLB1Q6P1J6 1458 aa31.06■■■□□ 2.56
PTPN18-202ENST00000347849 RAPGEF6Q8TEU7 1601 aa31.05■■■□□ 2.56
PTPN18-202ENST00000347849 MAPKBP1O60336 1514 aa31.01■■■□□ 2.55
PTPN18-202ENST00000347849 PTPN23Q9H3S7 1636 aa30.99■■■□□ 2.55
PTPN18-202ENST00000347849 CARMIL2Q6F5E8 1435 aa30.99■■■□□ 2.55
PTPN18-202ENST00000347849 PRG4Q92954 1404 aaPredicted RBP30.91■■■□□ 2.54
PTPN18-202ENST00000347849 MYT1Q01538 1121 aa30.91■■■□□ 2.54
PTPN18-202ENST00000347849 TCOF1Q13428 1488 aaKnown RBP30.89■■■□□ 2.54
PTPN18-202ENST00000347849 CHD1O14646 1710 aa30.89■■■□□ 2.54
PTPN18-202ENST00000347849 CHIC2Q9UKJ5 165 aa30.88■■■□□ 2.53
PTPN18-202ENST00000347849 HFM1A2PYH4 1435 aa30.87■■■□□ 2.53
PTPN18-202ENST00000347849 NAIPQ13075 1403 aa30.85■■■□□ 2.53
PTPN18-202ENST00000347849 SIN3AQ96ST3 1273 aa30.85■■■□□ 2.53
PTPN18-202ENST00000347849 CDK11AQ9UQ88 783 aaPredicted RBP30.84■■■□□ 2.53
PTPN18-202ENST00000347849 MIA2Q96PC5 1412 aa30.83■■■□□ 2.53
PTPN18-202ENST00000347849 ZNF644Q9H582 1327 aaPredicted RBP30.83■■■□□ 2.53
PTPN18-202ENST00000347849 RRP7BPQ9NSQ0 103 aa30.83■■■□□ 2.53
PTPN18-202ENST00000347849 TROQ12816 1431 aaPredicted RBP30.79■■■□□ 2.52
PTPN18-202ENST00000347849 ABCA8O94911 1581 aa30.79■■■□□ 2.52
PTPN18-202ENST00000347849 ATP10BO94823 1461 aa30.73■■■□□ 2.51
PTPN18-202ENST00000347849 KIF14Q15058 1648 aa30.73■■■□□ 2.51
PTPN18-202ENST00000347849 PTPRGP23470 1445 aa30.73■■■□□ 2.51
PTPN18-202ENST00000347849 UACAQ9BZF9 1416 aa30.67■■■□□ 2.5
PTPN18-202ENST00000347849 ERCC6L2Q5T890 1561 aa30.67■■■□□ 2.5
PTPN18-202ENST00000347849 KDM6BO15054 1643 aa30.65■■■□□ 2.5
PTPN18-202ENST00000347849 GPATCH8Q9UKJ3 1502 aaKnown RBP30.65■■■□□ 2.5
PTPN18-202ENST00000347849 ABCC5O15440 1437 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms