RNA–Protein interactions for RNA: ENST00000347735.10

ERC1-201, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 1 (best)

Gene ERC1, Length 4,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-201ENST00000347735 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
ERC1-201ENST00000347735 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
ERC1-201ENST00000347735 CCNB3Q8WWL7 1395 aa19.99■□□□□ 0.79
ERC1-201ENST00000347735 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
ERC1-201ENST00000347735 FHOD3Q2V2M9 1422 aa19.94■□□□□ 0.78
ERC1-201ENST00000347735 RAD54L2Q9Y4B4 1467 aa19.94■□□□□ 0.78
ERC1-201ENST00000347735 UNC13AQ9UPW8 1703 aa19.94■□□□□ 0.78
ERC1-201ENST00000347735 DNAJC5BQ9UF47 199 aa19.92■□□□□ 0.78
ERC1-201ENST00000347735 KDM2AQ9Y2K7 1162 aa19.91■□□□□ 0.78
ERC1-201ENST00000347735 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
ERC1-201ENST00000347735 FHAD1B1AJZ9 1412 aa19.9■□□□□ 0.78
ERC1-201ENST00000347735 PLEKHD1A6NEE1 506 aa19.9■□□□□ 0.78
ERC1-201ENST00000347735 TSPY4P0CV99 314 aa19.89■□□□□ 0.78
ERC1-201ENST00000347735 TSPY10P0CW01 314 aa19.89■□□□□ 0.78
ERC1-201ENST00000347735 NESP48681 1621 aa19.89■□□□□ 0.77
ERC1-201ENST00000347735 CFDP1Q9UEE9 299 aaPredicted RBP19.88■□□□□ 0.77
ERC1-201ENST00000347735 IGF1RP08069 1367 aa19.86■□□□□ 0.77
ERC1-201ENST00000347735 ERICH6Q7L0X2 663 aa19.84■□□□□ 0.77
ERC1-201ENST00000347735 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
ERC1-201ENST00000347735 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
ERC1-201ENST00000347735 CHGAP10645 457 aaKnown RBP19.8■□□□□ 0.76
ERC1-201ENST00000347735 CC2D2AQ9P2K1 1620 aa19.79■□□□□ 0.76
ERC1-201ENST00000347735 CFTRP13569 1480 aa19.78■□□□□ 0.76
ERC1-201ENST00000347735 NPM1P06748 294 aaKnown RBP eCLIP19.77■□□□□ 0.76
ERC1-201ENST00000347735 FOXD1Q16676 465 aa19.77■□□□□ 0.76
ERC1-201ENST00000347735 RAB3GAP2Q9H2M9 1393 aa19.74■□□□□ 0.75
ERC1-201ENST00000347735 FAM9BQ8IZU0 186 aa19.74■□□□□ 0.75
ERC1-201ENST00000347735 ARHGAP35Q9NRY4 1499 aa19.73■□□□□ 0.75
ERC1-201ENST00000347735 RGL3Q3MIN7 710 aa19.73■□□□□ 0.75
ERC1-201ENST00000347735 SENP3-EIF4A1A0A087X0R7 540 aa19.73■□□□□ 0.75
ERC1-201ENST00000347735 CUX1P39880 1505 aa19.73■□□□□ 0.75
ERC1-201ENST00000347735 KIF21BO75037 1637 aa19.7■□□□□ 0.74
ERC1-201ENST00000347735 HNRNPUQ00839 825 aaKnown RBP eCLIP19.69■□□□□ 0.74
ERC1-201ENST00000347735 SETD5Q9C0A6 1442 aa19.69■□□□□ 0.74
ERC1-201ENST00000347735 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
ERC1-201ENST00000347735 FMN1Q68DA7 1419 aa19.67■□□□□ 0.74
ERC1-201ENST00000347735 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.74
ERC1-201ENST00000347735 SALL2Q9Y467 1007 aaPredicted RBP19.66■□□□□ 0.74
ERC1-201ENST00000347735 HMGXB3Q12766 1538 aa19.65■□□□□ 0.74
ERC1-201ENST00000347735 TOP2BQ02880 1626 aa19.64■□□□□ 0.73
ERC1-201ENST00000347735 GAPVD1Q14C86 1478 aa19.64■□□□□ 0.73
ERC1-201ENST00000347735 EIF4G2P78344 907 aaKnown RBP eCLIP19.63■□□□□ 0.73
ERC1-201ENST00000347735 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
ERC1-201ENST00000347735 FKBP8Q14318 412 aa19.61■□□□□ 0.73
ERC1-201ENST00000347735 JPH4Q96JJ6 628 aa19.58■□□□□ 0.73
ERC1-201ENST00000347735 CLSPNQ9HAW4 1339 aa19.57■□□□□ 0.72
ERC1-201ENST00000347735 PRXQ9BXM0 1461 aa19.55■□□□□ 0.72
ERC1-201ENST00000347735 MRS2Q9HD23 443 aa19.54■□□□□ 0.72
ERC1-201ENST00000347735 DHX57Q6P158 1386 aaKnown RBP19.54■□□□□ 0.72
ERC1-201ENST00000347735 IRX6P78412 446 aaPredicted RBP19.53■□□□□ 0.72
ERC1-201ENST00000347735 POLA1P09884 1462 aaPredicted RBP19.52■□□□□ 0.71
ERC1-201ENST00000347735 TOPBP1Q92547 1522 aa19.51■□□□□ 0.71
ERC1-201ENST00000347735 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
ERC1-201ENST00000347735 PHLDB1Q86UU1 1377 aa19.51■□□□□ 0.71
ERC1-201ENST00000347735 CARMIL2Q6F5E8 1435 aa19.5■□□□□ 0.71
ERC1-201ENST00000347735 HNRNPMP52272 730 aaKnown RBP eCLIP19.48■□□□□ 0.715e-6■■■■□ 22
ERC1-201ENST00000347735 STAG3Q9UJ98 1225 aa19.48■□□□□ 0.71
ERC1-201ENST00000347735 MPHOSPH9Q99550 1183 aa19.47■□□□□ 0.71
ERC1-201ENST00000347735 PKD2Q13563 968 aa19.46■□□□□ 0.71
ERC1-201ENST00000347735 TMC1Q8TDI8 760 aa19.45■□□□□ 0.7
ERC1-201ENST00000347735 CARD11Q9BXL7 1154 aa19.45■□□□□ 0.7
ERC1-201ENST00000347735 ERICH3Q5RHP9 1530 aa19.44■□□□□ 0.7
ERC1-201ENST00000347735 ZNF644Q9H582 1327 aaPredicted RBP19.44■□□□□ 0.7
ERC1-201ENST00000347735 DCAF11Q8TEB1 546 aa19.43■□□□□ 0.7
ERC1-201ENST00000347735 ESF1Q9H501 851 aaKnown RBP19.41■□□□□ 0.7
ERC1-201ENST00000347735 HSPA5P11021 654 aaKnown RBP19.39■□□□□ 0.7
ERC1-201ENST00000347735 PPP1R15AO75807 674 aaPredicted RBP19.38■□□□□ 0.69
ERC1-201ENST00000347735 LRRC9Q6ZRR7 1453 aa19.38■□□□□ 0.69
ERC1-201ENST00000347735 L3MBTL2Q969R5 705 aa19.35■□□□□ 0.69
ERC1-201ENST00000347735 NUP155O75694 1391 aa19.34■□□□□ 0.69
ERC1-201ENST00000347735 CCDC18Q5T9S5 1454 aa19.33■□□□□ 0.68
ERC1-201ENST00000347735 BCL11AQ9H165 835 aa19.33■□□□□ 0.68
ERC1-201ENST00000347735 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
ERC1-201ENST00000347735 FGD6Q6ZV73 1430 aa19.29■□□□□ 0.68
ERC1-201ENST00000347735 TIMELESSQ9UNS1 1208 aa19.27■□□□□ 0.68
ERC1-201ENST00000347735 CASKIN1Q8WXD9 1431 aa19.27■□□□□ 0.68
ERC1-201ENST00000347735 GRIN2BQ13224 1484 aa19.27■□□□□ 0.68
ERC1-201ENST00000347735 PTPRGP23470 1445 aa19.27■□□□□ 0.68
ERC1-201ENST00000347735 MRC2Q9UBG0 1479 aa19.27■□□□□ 0.67
ERC1-201ENST00000347735 PRDM2Q13029 1718 aa19.27■□□□□ 0.67
ERC1-201ENST00000347735 GGT6Q6P531 493 aa19.25■□□□□ 0.67
ERC1-201ENST00000347735 ANKRD30AQ9BXX3 1397 aa19.24■□□□□ 0.67
ERC1-201ENST00000347735 CANXP27824 592 aaKnown RBP19.24■□□□□ 0.67
ERC1-201ENST00000347735 DAXXQ9UER7 740 aaPredicted RBP19.24■□□□□ 0.67
ERC1-201ENST00000347735 NCOA2Q15596 1464 aa19.23■□□□□ 0.67
ERC1-201ENST00000347735 URB2Q14146 1524 aaKnown RBP19.23■□□□□ 0.67
ERC1-201ENST00000347735 SUPT16HQ9Y5B9 1047 aaKnown RBP19.23■□□□□ 0.67
ERC1-201ENST00000347735 CC2D1BQ5T0F9 858 aaKnown RBP19.22■□□□□ 0.67
ERC1-201ENST00000347735 MYOM3Q5VTT5 1437 aa19.22■□□□□ 0.67
ERC1-201ENST00000347735 ABCA10Q8WWZ4 1543 aa19.22■□□□□ 0.67
ERC1-201ENST00000347735 EFCAB2Q5VUJ9 269 aa19.21■□□□□ 0.67
ERC1-201ENST00000347735 MLECQ14165 292 aa19.2■□□□□ 0.66
ERC1-201ENST00000347735 BIVM-ERCC5R4GMW8 1640 aa19.2■□□□□ 0.66
ERC1-201ENST00000347735 SLC24A1O60721 1099 aa19.2■□□□□ 0.66
ERC1-201ENST00000347735 RRBP1Q9P2E9 1410 aaKnown RBP19.2■□□□□ 0.66
ERC1-201ENST00000347735 SNAPC4Q5SXM2 1469 aa19.19■□□□□ 0.66
ERC1-201ENST00000347735 WDR43Q15061 677 aaKnown RBP eCLIP19.18■□□□□ 0.66
ERC1-201ENST00000347735 FYCO1Q9BQS8 1478 aa19.16■□□□□ 0.66
ERC1-201ENST00000347735 ARID4BQ4LE39 1312 aaPredicted RBP19.16■□□□□ 0.66
ERC1-201ENST00000347735 TIAM1Q13009 1591 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms