RNA–Protein interactions for RNA: ENST00000347735.10

ERC1-201, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 1 (best)

Gene ERC1, Length 4,955 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-201ENST00000347735 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
ERC1-201ENST00000347735 DCAF8L2P0C7V8 631 aa25.91■■□□□ 1.74
ERC1-201ENST00000347735 SHROOM4Q9ULL8 1493 aa25.05■■□□□ 1.6
ERC1-201ENST00000347735 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
ERC1-201ENST00000347735 EHMT2Q96KQ7 1210 aa23.73■■□□□ 1.39
ERC1-201ENST00000347735 FAM9AQ8IZU1 332 aaPredicted RBP23.3■■□□□ 1.32
ERC1-201ENST00000347735 ABCC9O60706 1549 aa23.02■■□□□ 1.28
ERC1-201ENST00000347735 TRIM41Q8WV44 630 aa22.89■■□□□ 1.26
ERC1-201ENST00000347735 PCGF6Q9BYE7 350 aa22.81■■□□□ 1.24
ERC1-201ENST00000347735 TTBK1Q5TCY1 1321 aaPredicted RBP22.8■■□□□ 1.24
ERC1-201ENST00000347735 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
ERC1-201ENST00000347735 RANGAP1P46060 587 aaPredicted RBP22.64■■□□□ 1.21
ERC1-201ENST00000347735 ZCCHC6Q5VYS8 1495 aaKnown RBP22.63■■□□□ 1.21
ERC1-201ENST00000347735 LOC105371045A0A1W2PR82 267 aa22.62■■□□□ 1.21
ERC1-201ENST00000347735 PABPN1Q86U42 306 aaKnown RBP eCLIP22.59■■□□□ 1.21
ERC1-201ENST00000347735 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
ERC1-201ENST00000347735 PPARGC1BQ86YN6 1023 aaKnown RBP22.46■■□□□ 1.19
ERC1-201ENST00000347735 UBTFP17480 764 aaKnown RBP22.32■■□□□ 1.16
ERC1-201ENST00000347735 SCRIBQ14160 1630 aa22.32■■□□□ 1.16
ERC1-201ENST00000347735 APLP2Q06481 763 aa22.27■■□□□ 1.16
ERC1-201ENST00000347735 ATP1B4Q9UN42 357 aaPredicted RBP22.01■■□□□ 1.11
ERC1-201ENST00000347735 CCER1Q8TC90 406 aaPredicted RBP21.91■■□□□ 1.1
ERC1-201ENST00000347735 TRIM26Q12899 539 aaPredicted RBP21.88■■□□□ 1.09
ERC1-201ENST00000347735 HRCP23327 699 aa21.71■■□□□ 1.07
ERC1-201ENST00000347735 MYO15BQ96JP2 1530 aa21.67■■□□□ 1.06
ERC1-201ENST00000347735 RSF1Q96T23 1441 aaPredicted RBP21.66■■□□□ 1.06
ERC1-201ENST00000347735 ITGAEP38570 1179 aa21.58■■□□□ 1.04
ERC1-201ENST00000347735 ZEB1P37275 1124 aaPredicted RBP21.57■■□□□ 1.04
ERC1-201ENST00000347735 HNRNPUL2Q1KMD3 747 aaKnown RBP21.57■■□□□ 1.04
ERC1-201ENST00000347735 RB1CC1Q8TDY2 1594 aa21.56■■□□□ 1.04
ERC1-201ENST00000347735 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
ERC1-201ENST00000347735 DCAF1Q9Y4B6 1507 aa21.53■■□□□ 1.04
ERC1-201ENST00000347735 NACADO15069 1562 aa21.51■■□□□ 1.03
ERC1-201ENST00000347735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
ERC1-201ENST00000347735 CSRNP3Q8WYN3 585 aa21.38■■□□□ 1.01
ERC1-201ENST00000347735 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
ERC1-201ENST00000347735 YTHDC1Q96MU7 727 aaKnown RBP21.22■□□□□ 0.99
ERC1-201ENST00000347735 P3H3Q8IVL6 736 aa21.2■□□□□ 0.98
ERC1-201ENST00000347735 BAZ1AQ9NRL2 1556 aaPredicted RBP21.08■□□□□ 0.97
ERC1-201ENST00000347735 FAM50AQ14320 339 aaKnown RBP21.06■□□□□ 0.96
ERC1-201ENST00000347735 ARID3CA6NKF2 412 aa21.03■□□□□ 0.96
ERC1-201ENST00000347735 WIZO95785 1651 aa21.01■□□□□ 0.95
ERC1-201ENST00000347735 FBLN2P98095 1184 aa21■□□□□ 0.95
ERC1-201ENST00000347735 BAZ1BQ9UIG0 1483 aaKnown RBP21■□□□□ 0.95
ERC1-201ENST00000347735 CENPBP07199 599 aaPredicted RBP20.94■□□□□ 0.94
ERC1-201ENST00000347735 WRNQ14191 1432 aaPredicted RBP eCLIP20.9■□□□□ 0.94
ERC1-201ENST00000347735 CCDC88BA6NC98 1476 aa20.9■□□□□ 0.94
ERC1-201ENST00000347735 ABCC8Q09428 1581 aa20.89■□□□□ 0.93
ERC1-201ENST00000347735 SOGA1O94964 1423 aa20.84■□□□□ 0.93
ERC1-201ENST00000347735 NEUROD1Q13562 356 aa20.82■□□□□ 0.92
ERC1-201ENST00000347735 DIEXFQ68CQ4 756 aaKnown RBP20.8■□□□□ 0.92
ERC1-201ENST00000347735 CEP162Q5TB80 1403 aa20.77■□□□□ 0.91
ERC1-201ENST00000347735 CNGB1Q14028 1251 aaPredicted RBP20.76■□□□□ 0.91
ERC1-201ENST00000347735 MYT1LQ9UL68 1186 aa20.72■□□□□ 0.91
ERC1-201ENST00000347735 CLIP1P30622 1438 aa20.72■□□□□ 0.91
ERC1-201ENST00000347735 POLR3GLQ9BT43 218 aa20.71■□□□□ 0.91
ERC1-201ENST00000347735 TRIM52Q96A61 297 aa20.68■□□□□ 0.9
ERC1-201ENST00000347735 GOLGA3Q08378 1498 aa20.64■□□□□ 0.9
ERC1-201ENST00000347735 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
ERC1-201ENST00000347735 SMARCA4P51532 1647 aa20.63■□□□□ 0.89
ERC1-201ENST00000347735 EEA1Q15075 1411 aa20.56■□□□□ 0.88
ERC1-201ENST00000347735 TNIKQ9UKE5 1360 aa20.56■□□□□ 0.88
ERC1-201ENST00000347735 PELP1Q8IZL8 1130 aaKnown RBP20.54■□□□□ 0.88
ERC1-201ENST00000347735 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
ERC1-201ENST00000347735 ZNF777Q9ULD5 760 aaPredicted RBP20.51■□□□□ 0.87
ERC1-201ENST00000347735 RUSC2Q8N2Y8 1516 aa20.5■□□□□ 0.87
ERC1-201ENST00000347735 ZNF316A6NFI3 1004 aaPredicted RBP20.49■□□□□ 0.87
ERC1-201ENST00000347735 SMARCA2P51531 1590 aa20.49■□□□□ 0.87
ERC1-201ENST00000347735 CEP164Q9UPV0 1460 aa20.49■□□□□ 0.87
ERC1-201ENST00000347735 KIF27Q86VH2 1401 aa20.49■□□□□ 0.87
ERC1-201ENST00000347735 CHIC2Q9UKJ5 165 aa20.44■□□□□ 0.86
ERC1-201ENST00000347735 ZNF326Q5BKZ1 582 aaKnown RBP20.43■□□□□ 0.86
ERC1-201ENST00000347735 CUX2O14529 1486 aa20.39■□□□□ 0.86
ERC1-201ENST00000347735 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
ERC1-201ENST00000347735 NEFLP07196 543 aa20.29■□□□□ 0.84
ERC1-201ENST00000347735 MTUS2Q5JR59 1369 aa20.29■□□□□ 0.84
ERC1-201ENST00000347735 CARMIL1Q5VZK9 1371 aa20.28■□□□□ 0.84
ERC1-201ENST00000347735 KANK4Q5T7N3 995 aaPredicted RBP20.27■□□□□ 0.83
ERC1-201ENST00000347735 HIRIP3Q9BW71 556 aaPredicted RBP20.24■□□□□ 0.83
ERC1-201ENST00000347735 RAPGEF2Q9Y4G8 1499 aa20.23■□□□□ 0.83
ERC1-201ENST00000347735 TDRD9Q8NDG6 1382 aaKnown RBP20.23■□□□□ 0.83
ERC1-201ENST00000347735 CDK11AQ9UQ88 783 aaPredicted RBP20.22■□□□□ 0.83
ERC1-201ENST00000347735 GTF3C3Q9Y5Q9 886 aa20.22■□□□□ 0.83
ERC1-201ENST00000347735 CADPSQ9ULU8 1353 aa20.21■□□□□ 0.83
ERC1-201ENST00000347735 RRP7BPQ9NSQ0 103 aa20.2■□□□□ 0.82
ERC1-201ENST00000347735 ERCC6Q03468 1493 aa20.14■□□□□ 0.81
ERC1-201ENST00000347735 VPS8Q8N3P4 1428 aa20.14■□□□□ 0.81
ERC1-201ENST00000347735 EIF4G1Q04637 1599 aaKnown RBP20.11■□□□□ 0.81
ERC1-201ENST00000347735 DDX10Q13206 875 aaKnown RBP20.11■□□□□ 0.81
ERC1-201ENST00000347735 TONSLQ96HA7 1378 aa20.09■□□□□ 0.81
ERC1-201ENST00000347735 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.8
ERC1-201ENST00000347735 BCANQ96GW7 911 aa20.07■□□□□ 0.8
ERC1-201ENST00000347735 SLC4A1APQ9BWU0 796 aaKnown RBP20.07■□□□□ 0.8
ERC1-201ENST00000347735 ANP32CO43423 234 aa20.07■□□□□ 0.8
ERC1-201ENST00000347735 MIER1Q8N108 512 aa20.07■□□□□ 0.8
ERC1-201ENST00000347735 ACIN1Q9UKV3 1341 aaKnown RBP20.04■□□□□ 0.8
ERC1-201ENST00000347735 SIN3AQ96ST3 1273 aa20.04■□□□□ 0.8
ERC1-201ENST00000347735 KCNH8Q96L42 1107 aa20.02■□□□□ 0.8
ERC1-201ENST00000347735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.02■□□□□ 0.81e-6■■■□□ 17.5
ERC1-201ENST00000347735 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms