RNA–Protein interactions for RNA: ENST00000347027.10

ITGA7-202, Transcript of integrin subunit alpha 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ITGA7, Length 4,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-202ENST00000347027 CHMP7Q8WUX9 453 aaPredicted RBP22.47■■□□□ 1.19
ITGA7-202ENST00000347027 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
ITGA7-202ENST00000347027 RAB3GAP2Q9H2M9 1393 aa22.42■■□□□ 1.18
ITGA7-202ENST00000347027 SETD5Q9C0A6 1442 aa22.42■■□□□ 1.18
ITGA7-202ENST00000347027 EIF4G1Q04637 1599 aaKnown RBP22.41■■□□□ 1.18
ITGA7-202ENST00000347027 FKBP8Q14318 412 aa22.41■■□□□ 1.18
ITGA7-202ENST00000347027 IGF1RP08069 1367 aa22.4■■□□□ 1.18
ITGA7-202ENST00000347027 KIF21BO75037 1637 aa22.39■■□□□ 1.18
ITGA7-202ENST00000347027 HNRNPUQ00839 825 aaKnown RBP eCLIP22.38■■□□□ 1.17
ITGA7-202ENST00000347027 DHX57Q6P158 1386 aaKnown RBP22.37■■□□□ 1.17
ITGA7-202ENST00000347027 FHOD3Q2V2M9 1422 aa22.36■■□□□ 1.17
ITGA7-202ENST00000347027 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
ITGA7-202ENST00000347027 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
ITGA7-202ENST00000347027 ARHGAP35Q9NRY4 1499 aa22.33■■□□□ 1.17
ITGA7-202ENST00000347027 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
ITGA7-202ENST00000347027 EIF4G2P78344 907 aaKnown RBP eCLIP22.31■■□□□ 1.16
ITGA7-202ENST00000347027 CFTRP13569 1480 aa22.3■■□□□ 1.16
ITGA7-202ENST00000347027 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
ITGA7-202ENST00000347027 FMN1Q68DA7 1419 aa22.29■■□□□ 1.16
ITGA7-202ENST00000347027 TSPY4P0CV99 314 aa22.28■■□□□ 1.16
ITGA7-202ENST00000347027 TSPY10P0CW01 314 aa22.28■■□□□ 1.16
ITGA7-202ENST00000347027 TIMELESSQ9UNS1 1208 aa22.28■■□□□ 1.16
ITGA7-202ENST00000347027 PRXQ9BXM0 1461 aa22.27■■□□□ 1.16
ITGA7-202ENST00000347027 FAM9BQ8IZU0 186 aa22.26■■□□□ 1.15
ITGA7-202ENST00000347027 TOP2BQ02880 1626 aa22.25■■□□□ 1.15
ITGA7-202ENST00000347027 ARAP1Q96P48 1450 aa22.25■■□□□ 1.15
ITGA7-202ENST00000347027 CFDP1Q9UEE9 299 aaPredicted RBP22.25■■□□□ 1.15
ITGA7-202ENST00000347027 ERICH3Q5RHP9 1530 aa22.22■■□□□ 1.15
ITGA7-202ENST00000347027 UNC13AQ9UPW8 1703 aa22.22■■□□□ 1.15
ITGA7-202ENST00000347027 PLEKHD1A6NEE1 506 aa22.22■■□□□ 1.15
ITGA7-202ENST00000347027 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
ITGA7-202ENST00000347027 CUX1P39880 1505 aa22.19■■□□□ 1.14
ITGA7-202ENST00000347027 HMGXB3Q12766 1538 aa22.19■■□□□ 1.14
ITGA7-202ENST00000347027 RAD54L2Q9Y4B4 1467 aa22.18■■□□□ 1.14
ITGA7-202ENST00000347027 MRS2Q9HD23 443 aa22.18■■□□□ 1.14
ITGA7-202ENST00000347027 KDM2AQ9Y2K7 1162 aa22.16■■□□□ 1.14
ITGA7-202ENST00000347027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.15■■□□□ 1.14
ITGA7-202ENST00000347027 PPP1R15AO75807 674 aaPredicted RBP22.13■■□□□ 1.13
ITGA7-202ENST00000347027 ERCC6Q03468 1493 aa22.1■■□□□ 1.13
ITGA7-202ENST00000347027 PHLDB1Q86UU1 1377 aa22.08■■□□□ 1.12
ITGA7-202ENST00000347027 SUPT16HQ9Y5B9 1047 aaKnown RBP22.05■■□□□ 1.12
ITGA7-202ENST00000347027 FOXD1Q16676 465 aa22.04■■□□□ 1.12
ITGA7-202ENST00000347027 IRX6P78412 446 aaPredicted RBP22.04■■□□□ 1.12
ITGA7-202ENST00000347027 TMC1Q8TDI8 760 aa22.04■■□□□ 1.12
ITGA7-202ENST00000347027 RRBP1Q9P2E9 1410 aaKnown RBP22.03■■□□□ 1.12
ITGA7-202ENST00000347027 LRRC9Q6ZRR7 1453 aa22.02■■□□□ 1.12
ITGA7-202ENST00000347027 KCNH8Q96L42 1107 aa22■■□□□ 1.11
ITGA7-202ENST00000347027 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
ITGA7-202ENST00000347027 MPHOSPH9Q99550 1183 aa21.99■■□□□ 1.11
ITGA7-202ENST00000347027 NESP48681 1621 aa21.97■■□□□ 1.11
ITGA7-202ENST00000347027 HSPA5P11021 654 aaKnown RBP21.97■■□□□ 1.11
ITGA7-202ENST00000347027 CCER2I3L3R5 266 aa21.96■■□□□ 1.11
ITGA7-202ENST00000347027 SALL2Q9Y467 1007 aaPredicted RBP21.96■■□□□ 1.11
ITGA7-202ENST00000347027 RGL3Q3MIN7 710 aa21.96■■□□□ 1.11
ITGA7-202ENST00000347027 DAXXQ9UER7 740 aaPredicted RBP21.93■■□□□ 1.1
ITGA7-202ENST00000347027 CARD11Q9BXL7 1154 aa21.9■■□□□ 1.1
ITGA7-202ENST00000347027 FGD6Q6ZV73 1430 aa21.9■■□□□ 1.1
ITGA7-202ENST00000347027 CC2D2AQ9P2K1 1620 aa21.89■■□□□ 1.1
ITGA7-202ENST00000347027 POLA1P09884 1462 aaPredicted RBP21.89■■□□□ 1.09
ITGA7-202ENST00000347027 CASKIN1Q8WXD9 1431 aa21.88■■□□□ 1.09
ITGA7-202ENST00000347027 L3MBTL2Q969R5 705 aa21.88■■□□□ 1.09
ITGA7-202ENST00000347027 TOPBP1Q92547 1522 aa21.87■■□□□ 1.09
ITGA7-202ENST00000347027 CCDC18Q5T9S5 1454 aa21.87■■□□□ 1.09
ITGA7-202ENST00000347027 SENP3-EIF4A1A0A087X0R7 540 aa21.86■■□□□ 1.09
ITGA7-202ENST00000347027 PKD2Q13563 968 aa21.86■■□□□ 1.09
ITGA7-202ENST00000347027 CHGAP10645 457 aaKnown RBP21.85■■□□□ 1.09
ITGA7-202ENST00000347027 CARMIL2Q6F5E8 1435 aa21.84■■□□□ 1.09
ITGA7-202ENST00000347027 JPH4Q96JJ6 628 aa21.81■■□□□ 1.08
ITGA7-202ENST00000347027 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
ITGA7-202ENST00000347027 MYOM3Q5VTT5 1437 aa21.8■■□□□ 1.08
ITGA7-202ENST00000347027 TIAM1Q13009 1591 aa21.8■■□□□ 1.08
ITGA7-202ENST00000347027 AQRO60306 1485 aaKnown RBP eCLIP21.79■■□□□ 1.08
ITGA7-202ENST00000347027 FYCO1Q9BQS8 1478 aa21.79■■□□□ 1.08
ITGA7-202ENST00000347027 NPM1P06748 294 aaKnown RBP eCLIP21.79■■□□□ 1.08
ITGA7-202ENST00000347027 CCDC136Q96JN2 1154 aa21.79■■□□□ 1.08
ITGA7-202ENST00000347027 DCAF11Q8TEB1 546 aa21.77■■□□□ 1.08
ITGA7-202ENST00000347027 RTL5Q5HYW3 569 aaPredicted RBP21.75■■□□□ 1.07
ITGA7-202ENST00000347027 NCOA2Q15596 1464 aa21.74■■□□□ 1.07
ITGA7-202ENST00000347027 NUP155O75694 1391 aa21.73■■□□□ 1.07
ITGA7-202ENST00000347027 DNMBPQ6XZF7 1577 aa21.73■■□□□ 1.07
ITGA7-202ENST00000347027 UACAQ9BZF9 1416 aa21.73■■□□□ 1.07
ITGA7-202ENST00000347027 ANKRD30AQ9BXX3 1397 aa21.72■■□□□ 1.07
ITGA7-202ENST00000347027 EFCAB5A4FU69 1503 aa21.71■■□□□ 1.07
ITGA7-202ENST00000347027 DNAJC5BQ9UF47 199 aa21.71■■□□□ 1.07
ITGA7-202ENST00000347027 ABCA10Q8WWZ4 1543 aa21.71■■□□□ 1.07
ITGA7-202ENST00000347027 ZNF644Q9H582 1327 aaPredicted RBP21.69■■□□□ 1.06
ITGA7-202ENST00000347027 ANP32AP39687 249 aaKnown RBP21.68■■□□□ 1.06
ITGA7-202ENST00000347027 HNRNPMP52272 730 aaKnown RBP eCLIP21.65■■□□□ 1.06
ITGA7-202ENST00000347027 CANXP27824 592 aaKnown RBP21.65■■□□□ 1.06
ITGA7-202ENST00000347027 WDR43Q15061 677 aaKnown RBP eCLIP21.64■■□□□ 1.06
ITGA7-202ENST00000347027 NPM2Q86SE8 214 aaKnown RBP21.63■■□□□ 1.05
ITGA7-202ENST00000347027 PPP4R2Q9NY27 417 aa21.61■■□□□ 1.05
ITGA7-202ENST00000347027 GRIN2BQ13224 1484 aa21.6■■□□□ 1.05
ITGA7-202ENST00000347027 PCF11O94913 1555 aaKnown RBP21.59■■□□□ 1.05
ITGA7-202ENST00000347027 MAP3K1Q13233 1512 aa21.58■■□□□ 1.05
ITGA7-202ENST00000347027 HFM1A2PYH4 1435 aa21.57■■□□□ 1.04
ITGA7-202ENST00000347027 B4GALNT3Q6L9W6 998 aa21.56■■□□□ 1.04
ITGA7-202ENST00000347027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.56■■□□□ 1.04
ITGA7-202ENST00000347027 KNSTRNQ9Y448 316 aa21.54■■□□□ 1.04
ITGA7-202ENST00000347027 CC2D1BQ5T0F9 858 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms