RNA–Protein interactions for RNA: ENST00000347027.10

ITGA7-202, Transcript of integrin subunit alpha 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ITGA7, Length 4,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-202ENST00000347027 NISCHQ9Y2I1 1504 aa30.72■■■□□ 2.51
ITGA7-202ENST00000347027 DCAF8L2P0C7V8 631 aa28.41■■■□□ 2.14
ITGA7-202ENST00000347027 SHROOM4Q9ULL8 1493 aa27.84■■■□□ 2.05
ITGA7-202ENST00000347027 SUPT5HO00267 1087 aaKnown RBP27.78■■■□□ 2.04
ITGA7-202ENST00000347027 EHMT2Q96KQ7 1210 aa26.09■■□□□ 1.77
ITGA7-202ENST00000347027 PCGF6Q9BYE7 350 aa25.93■■□□□ 1.74
ITGA7-202ENST00000347027 FAM9AQ8IZU1 332 aaPredicted RBP25.93■■□□□ 1.74
ITGA7-202ENST00000347027 CHIC1Q5VXU3 224 aa25.89■■□□□ 1.73
ITGA7-202ENST00000347027 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
ITGA7-202ENST00000347027 ZCCHC6Q5VYS8 1495 aaKnown RBP25.7■■□□□ 1.7
ITGA7-202ENST00000347027 LOC105371045A0A1W2PR82 267 aa25.48■■□□□ 1.67
ITGA7-202ENST00000347027 CCDC180Q9P1Z9 1646 aa25.47■■□□□ 1.67
ITGA7-202ENST00000347027 ABCC9O60706 1549 aa25.3■■□□□ 1.64
ITGA7-202ENST00000347027 TTBK1Q5TCY1 1321 aaPredicted RBP25.21■■□□□ 1.63
ITGA7-202ENST00000347027 HRCP23327 699 aa25.21■■□□□ 1.63
ITGA7-202ENST00000347027 TRIM26Q12899 539 aaPredicted RBP25.12■■□□□ 1.61
ITGA7-202ENST00000347027 APLP2Q06481 763 aa25.03■■□□□ 1.6
ITGA7-202ENST00000347027 ZEB1P37275 1124 aaPredicted RBP25.01■■□□□ 1.59
ITGA7-202ENST00000347027 PPARGC1BQ86YN6 1023 aaKnown RBP24.99■■□□□ 1.59
ITGA7-202ENST00000347027 UBTFP17480 764 aaKnown RBP24.98■■□□□ 1.59
ITGA7-202ENST00000347027 RANGAP1P46060 587 aaPredicted RBP24.87■■□□□ 1.57
ITGA7-202ENST00000347027 CCER1Q8TC90 406 aaPredicted RBP24.86■■□□□ 1.57
ITGA7-202ENST00000347027 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
ITGA7-202ENST00000347027 PABPN1Q86U42 306 aaKnown RBP eCLIP24.73■■□□□ 1.55
ITGA7-202ENST00000347027 MYO15BQ96JP2 1530 aa24.69■■□□□ 1.54
ITGA7-202ENST00000347027 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
ITGA7-202ENST00000347027 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
ITGA7-202ENST00000347027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.33■■□□□ 1.48
ITGA7-202ENST00000347027 ATP1B4Q9UN42 357 aaPredicted RBP24.26■■□□□ 1.47
ITGA7-202ENST00000347027 NACADO15069 1562 aa24.24■■□□□ 1.47
ITGA7-202ENST00000347027 HNRNPUL2Q1KMD3 747 aaKnown RBP24.22■■□□□ 1.47
ITGA7-202ENST00000347027 CENPBP07199 599 aaPredicted RBP24.21■■□□□ 1.47
ITGA7-202ENST00000347027 CSRNP3Q8WYN3 585 aa24.18■■□□□ 1.46
ITGA7-202ENST00000347027 CECR2Q9BXF3 1484 aa24.14■■□□□ 1.45
ITGA7-202ENST00000347027 RB1CC1Q8TDY2 1594 aa24.11■■□□□ 1.45
ITGA7-202ENST00000347027 ITGAEP38570 1179 aa23.98■■□□□ 1.43
ITGA7-202ENST00000347027 YTHDC1Q96MU7 727 aaKnown RBP23.96■■□□□ 1.43
ITGA7-202ENST00000347027 MROH2BQ7Z745 1585 aa23.88■■□□□ 1.41
ITGA7-202ENST00000347027 DIEXFQ68CQ4 756 aaKnown RBP23.85■■□□□ 1.41
ITGA7-202ENST00000347027 BAZ1AQ9NRL2 1556 aaPredicted RBP23.83■■□□□ 1.41
ITGA7-202ENST00000347027 PELP1Q8IZL8 1130 aaKnown RBP23.81■■□□□ 1.4
ITGA7-202ENST00000347027 CEP162Q5TB80 1403 aa23.6■■□□□ 1.37
ITGA7-202ENST00000347027 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
ITGA7-202ENST00000347027 EEA1Q15075 1411 aa23.59■■□□□ 1.37
ITGA7-202ENST00000347027 WIZO95785 1651 aa23.57■■□□□ 1.36
ITGA7-202ENST00000347027 FAM50AQ14320 339 aaKnown RBP23.53■■□□□ 1.36
ITGA7-202ENST00000347027 ZNF316A6NFI3 1004 aaPredicted RBP23.52■■□□□ 1.36
ITGA7-202ENST00000347027 CCDC88BA6NC98 1476 aa23.52■■□□□ 1.36
ITGA7-202ENST00000347027 TNIKQ9UKE5 1360 aa23.5■■□□□ 1.35
ITGA7-202ENST00000347027 BAZ1BQ9UIG0 1483 aaKnown RBP23.49■■□□□ 1.35
ITGA7-202ENST00000347027 SOGA1O94964 1423 aa23.48■■□□□ 1.35
ITGA7-202ENST00000347027 CLIP1P30622 1438 aa23.48■■□□□ 1.35
ITGA7-202ENST00000347027 GOLGA3Q08378 1498 aa23.48■■□□□ 1.35
ITGA7-202ENST00000347027 P3H3Q8IVL6 736 aa23.44■■□□□ 1.34
ITGA7-202ENST00000347027 ABCC8Q09428 1581 aa23.43■■□□□ 1.34
ITGA7-202ENST00000347027 TOP2AP11388 1531 aaKnown RBP23.34■■□□□ 1.33
ITGA7-202ENST00000347027 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
ITGA7-202ENST00000347027 NEUROD1Q13562 356 aa23.3■■□□□ 1.32
ITGA7-202ENST00000347027 GTF3C3Q9Y5Q9 886 aa23.29■■□□□ 1.32
ITGA7-202ENST00000347027 ACIN1Q9UKV3 1341 aaKnown RBP23.27■■□□□ 1.32
ITGA7-202ENST00000347027 NEFLP07196 543 aa23.23■■□□□ 1.31
ITGA7-202ENST00000347027 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
ITGA7-202ENST00000347027 KIF27Q86VH2 1401 aa23.13■■□□□ 1.29
ITGA7-202ENST00000347027 TRIM52Q96A61 297 aa23.09■■□□□ 1.29
ITGA7-202ENST00000347027 SMARCA2P51531 1590 aa23.07■■□□□ 1.28
ITGA7-202ENST00000347027 RUSC2Q8N2Y8 1516 aa23.06■■□□□ 1.28
ITGA7-202ENST00000347027 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
ITGA7-202ENST00000347027 ARID3CA6NKF2 412 aa23.03■■□□□ 1.28
ITGA7-202ENST00000347027 SCAF1Q9H7N4 1312 aaKnown RBP23■■□□□ 1.27
ITGA7-202ENST00000347027 POLR3GLQ9BT43 218 aa22.99■■□□□ 1.27
ITGA7-202ENST00000347027 VPS8Q8N3P4 1428 aa22.98■■□□□ 1.27
ITGA7-202ENST00000347027 MIER1Q8N108 512 aa22.94■■□□□ 1.26
ITGA7-202ENST00000347027 FBLN2P98095 1184 aa22.93■■□□□ 1.26
ITGA7-202ENST00000347027 CNGB1Q14028 1251 aaPredicted RBP22.91■■□□□ 1.26
ITGA7-202ENST00000347027 ANP32CO43423 234 aa22.86■■□□□ 1.25
ITGA7-202ENST00000347027 CUX2O14529 1486 aa22.85■■□□□ 1.25
ITGA7-202ENST00000347027 RAPGEF2Q9Y4G8 1499 aa22.84■■□□□ 1.25
ITGA7-202ENST00000347027 KANK4Q5T7N3 995 aaPredicted RBP22.82■■□□□ 1.24
ITGA7-202ENST00000347027 MTUS2Q5JR59 1369 aa22.82■■□□□ 1.24
ITGA7-202ENST00000347027 CARMIL1Q5VZK9 1371 aa22.81■■□□□ 1.24
ITGA7-202ENST00000347027 DDX10Q13206 875 aaKnown RBP22.77■■□□□ 1.24
ITGA7-202ENST00000347027 TONSLQ96HA7 1378 aa22.77■■□□□ 1.24
ITGA7-202ENST00000347027 CCNB3Q8WWL7 1395 aa22.74■■□□□ 1.23
ITGA7-202ENST00000347027 CHIC2Q9UKJ5 165 aa22.73■■□□□ 1.23
ITGA7-202ENST00000347027 ERICH6Q7L0X2 663 aa22.73■■□□□ 1.23
ITGA7-202ENST00000347027 CLSPNQ9HAW4 1339 aa22.71■■□□□ 1.23
ITGA7-202ENST00000347027 BCANQ96GW7 911 aa22.71■■□□□ 1.23
ITGA7-202ENST00000347027 CDK11AQ9UQ88 783 aaPredicted RBP22.71■■□□□ 1.23
ITGA7-202ENST00000347027 ZNF326Q5BKZ1 582 aaKnown RBP22.7■■□□□ 1.22
ITGA7-202ENST00000347027 MYT1LQ9UL68 1186 aa22.68■■□□□ 1.22
ITGA7-202ENST00000347027 ZNF777Q9ULD5 760 aaPredicted RBP22.67■■□□□ 1.22
ITGA7-202ENST00000347027 CADPSQ9ULU8 1353 aa22.65■■□□□ 1.22
ITGA7-202ENST00000347027 HIRIP3Q9BW71 556 aaPredicted RBP22.64■■□□□ 1.21
ITGA7-202ENST00000347027 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
ITGA7-202ENST00000347027 MYT1Q01538 1121 aa22.58■■□□□ 1.21
ITGA7-202ENST00000347027 SIN3AQ96ST3 1273 aa22.57■■□□□ 1.2
ITGA7-202ENST00000347027 RRP7BPQ9NSQ0 103 aa22.57■■□□□ 1.2
ITGA7-202ENST00000347027 SYNJ1O43426 1573 aa22.53■■□□□ 1.2
ITGA7-202ENST00000347027 NCAPD3P42695 1498 aa22.52■■□□□ 1.2
ITGA7-202ENST00000347027 BICRAQ9NZM4 1560 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms