RNA–Protein interactions for RNA: ENST00000345125.7

CTSB-201, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-201ENST00000345125 GAPVD1Q14C86 1478 aa24.76■■□□□ 1.55
CTSB-201ENST00000345125 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
CTSB-201ENST00000345125 TARBP1Q13395 1621 aaKnown RBP24.73■■□□□ 1.55
CTSB-201ENST00000345125 PCF11O94913 1555 aaKnown RBP24.68■■□□□ 1.54
CTSB-201ENST00000345125 CFAP43Q8NDM7 1665 aa24.66■■□□□ 1.54
CTSB-201ENST00000345125 CCNB3Q8WWL7 1395 aa24.66■■□□□ 1.54
CTSB-201ENST00000345125 FHOD3Q2V2M9 1422 aa24.66■■□□□ 1.54
CTSB-201ENST00000345125 LRRC9Q6ZRR7 1453 aa24.65■■□□□ 1.54
CTSB-201ENST00000345125 MRC2Q9UBG0 1479 aa24.65■■□□□ 1.54
CTSB-201ENST00000345125 AQRO60306 1485 aaKnown RBP eCLIP24.63■■□□□ 1.533e-7■■■■■ 33.7
CTSB-201ENST00000345125 P3H3Q8IVL6 736 aa24.62■■□□□ 1.53
CTSB-201ENST00000345125 FYCO1Q9BQS8 1478 aa24.62■■□□□ 1.53
CTSB-201ENST00000345125 CASKIN1Q8WXD9 1431 aa24.6■■□□□ 1.53
CTSB-201ENST00000345125 SAMD9Q5K651 1589 aa24.57■■□□□ 1.52
CTSB-201ENST00000345125 PBRM1Q86U86 1689 aa24.56■■□□□ 1.52
CTSB-201ENST00000345125 FMN1Q68DA7 1419 aa24.56■■□□□ 1.52
CTSB-201ENST00000345125 CLSPNQ9HAW4 1339 aa24.53■■□□□ 1.52
CTSB-201ENST00000345125 DHX57Q6P158 1386 aaKnown RBP24.51■■□□□ 1.51
CTSB-201ENST00000345125 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
CTSB-201ENST00000345125 WDR62O43379 1518 aa24.5■■□□□ 1.51
CTSB-201ENST00000345125 PHLDB1Q86UU1 1377 aa24.5■■□□□ 1.51
CTSB-201ENST00000345125 ADAMTS12P58397 1594 aa24.48■■□□□ 1.51
CTSB-201ENST00000345125 IFT140Q96RY7 1462 aa24.46■■□□□ 1.51
CTSB-201ENST00000345125 ATP1B4Q9UN42 357 aaPredicted RBP24.46■■□□□ 1.51
CTSB-201ENST00000345125 GRIN2BQ13224 1484 aa24.45■■□□□ 1.5
CTSB-201ENST00000345125 ZNF316A6NFI3 1004 aaPredicted RBP24.42■■□□□ 1.5
CTSB-201ENST00000345125 DIEXFQ68CQ4 756 aaKnown RBP24.4■■□□□ 1.5
CTSB-201ENST00000345125 THOC2Q8NI27 1593 aaKnown RBP24.39■■□□□ 1.5
CTSB-201ENST00000345125 ITGAEP38570 1179 aa24.37■■□□□ 1.49
CTSB-201ENST00000345125 IQGAP2Q13576 1575 aa24.36■■□□□ 1.49
CTSB-201ENST00000345125 ZNF608Q9ULD9 1512 aaPredicted RBP24.36■■□□□ 1.49
CTSB-201ENST00000345125 LRRIQ1Q96JM4 1722 aa24.34■■□□□ 1.49
CTSB-201ENST00000345125 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.34■■□□□ 1.492e-6■■□□□ 11.9
CTSB-201ENST00000345125 RAB3GAP2Q9H2M9 1393 aa24.32■■□□□ 1.48
CTSB-201ENST00000345125 FAM50AQ14320 339 aaKnown RBP24.3■■□□□ 1.48
CTSB-201ENST00000345125 SETD5Q9C0A6 1442 aa24.3■■□□□ 1.48
CTSB-201ENST00000345125 ERCC6Q03468 1493 aa24.3■■□□□ 1.48
CTSB-201ENST00000345125 MTUS2Q5JR59 1369 aa24.29■■□□□ 1.48
CTSB-201ENST00000345125 EIF4G3O43432 1585 aaKnown RBP24.26■■□□□ 1.47
CTSB-201ENST00000345125 FGD6Q6ZV73 1430 aa24.25■■□□□ 1.47
CTSB-201ENST00000345125 UGGT2Q9NYU1 1516 aa24.25■■□□□ 1.47
CTSB-201ENST00000345125 EHBP1L1Q8N3D4 1523 aa24.24■■□□□ 1.47
CTSB-201ENST00000345125 CCDC18Q5T9S5 1454 aa24.24■■□□□ 1.47
CTSB-201ENST00000345125 HECW1Q76N89 1606 aa24.22■■□□□ 1.47
CTSB-201ENST00000345125 SUPT6HQ7KZ85 1726 aaKnown RBP24.2■■□□□ 1.47
CTSB-201ENST00000345125 NCOA2Q15596 1464 aa24.2■■□□□ 1.47
CTSB-201ENST00000345125 KIAA0586Q9BVV6 1533 aa24.2■■□□□ 1.46
CTSB-201ENST00000345125 MAPKBP1O60336 1514 aa24.18■■□□□ 1.46
CTSB-201ENST00000345125 GRIN2AQ12879 1464 aa24.18■■□□□ 1.46
CTSB-201ENST00000345125 MYOM3Q5VTT5 1437 aa24.16■■□□□ 1.46
CTSB-201ENST00000345125 ARHGEF11O15085 1522 aa24.16■■□□□ 1.46
CTSB-201ENST00000345125 MAGI1Q96QZ7 1491 aaPredicted RBP24.15■■□□□ 1.46
CTSB-201ENST00000345125 MAGI3Q5TCQ9 1506 aa24.15■■□□□ 1.46
CTSB-201ENST00000345125 EPRSP07814 1512 aaKnown RBP24.13■■□□□ 1.45
CTSB-201ENST00000345125 KIAA0556O60303 1618 aa24.12■■□□□ 1.45
CTSB-201ENST00000345125 DISP1Q96F81 1524 aa24.1■■□□□ 1.45
CTSB-201ENST00000345125 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
CTSB-201ENST00000345125 PTPN23Q9H3S7 1636 aa24.05■■□□□ 1.44
CTSB-201ENST00000345125 CDK13Q14004 1512 aaKnown RBP24.05■■□□□ 1.44
CTSB-201ENST00000345125 PTPRKQ15262 1439 aa24.04■■□□□ 1.44
CTSB-201ENST00000345125 HFM1A2PYH4 1435 aa24.03■■□□□ 1.44
CTSB-201ENST00000345125 TCOF1Q13428 1488 aaKnown RBP24.01■■□□□ 1.43
CTSB-201ENST00000345125 CEP170Q5SW79 1584 aa24.01■■□□□ 1.43
CTSB-201ENST00000345125 CHMP7Q8WUX9 453 aaPredicted RBP24■■□□□ 1.43
CTSB-201ENST00000345125 RAPGEF6Q8TEU7 1601 aa23.96■■□□□ 1.43
CTSB-201ENST00000345125 NUP160Q12769 1436 aa23.95■■□□□ 1.43
CTSB-201ENST00000345125 MIA2Q96PC5 1412 aa23.95■■□□□ 1.43
CTSB-201ENST00000345125 NUP153P49790 1475 aaKnown RBP23.95■■□□□ 1.42
CTSB-201ENST00000345125 NAIPQ13075 1403 aa23.94■■□□□ 1.42
CTSB-201ENST00000345125 MIER1Q8N108 512 aa23.91■■□□□ 1.42
CTSB-201ENST00000345125 UACAQ9BZF9 1416 aa23.91■■□□□ 1.42
CTSB-201ENST00000345125 TIMELESSQ9UNS1 1208 aa23.91■■□□□ 1.42
CTSB-201ENST00000345125 ACIN1Q9UKV3 1341 aaKnown RBP23.9■■□□□ 1.42
CTSB-201ENST00000345125 SIN3AQ96ST3 1273 aa23.89■■□□□ 1.41
CTSB-201ENST00000345125 ARID3CA6NKF2 412 aa23.88■■□□□ 1.41
CTSB-201ENST00000345125 CENPBP07199 599 aaPredicted RBP23.88■■□□□ 1.41
CTSB-201ENST00000345125 FBLN2P98095 1184 aa23.87■■□□□ 1.41
CTSB-201ENST00000345125 AKNAQ7Z591 1439 aa23.86■■□□□ 1.41
CTSB-201ENST00000345125 SCAF1Q9H7N4 1312 aaKnown RBP23.85■■□□□ 1.41
CTSB-201ENST00000345125 CARMIL2Q6F5E8 1435 aa23.85■■□□□ 1.41
CTSB-201ENST00000345125 GCC2Q8IWJ2 1684 aa23.85■■□□□ 1.41
CTSB-201ENST00000345125 NEUROD1Q13562 356 aa23.84■■□□□ 1.41
CTSB-201ENST00000345125 JPH4Q96JJ6 628 aa23.83■■□□□ 1.4
CTSB-201ENST00000345125 CDK11AQ9UQ88 783 aaPredicted RBP23.83■■□□□ 1.4
CTSB-201ENST00000345125 PLB1Q6P1J6 1458 aa23.8■■□□□ 1.4
CTSB-201ENST00000345125 TROQ12816 1431 aaPredicted RBP23.77■■□□□ 1.4
CTSB-201ENST00000345125 RRP7BPQ9NSQ0 103 aa23.76■■□□□ 1.39
CTSB-201ENST00000345125 CHIC2Q9UKJ5 165 aa23.74■■□□□ 1.39
CTSB-201ENST00000345125 DNMT1P26358 1616 aaKnown RBP23.73■■□□□ 1.39
CTSB-201ENST00000345125 PRG4Q92954 1404 aaPredicted RBP23.73■■□□□ 1.39
CTSB-201ENST00000345125 ADCY10Q96PN6 1610 aa23.73■■□□□ 1.39
CTSB-201ENST00000345125 PPP1R15AO75807 674 aaPredicted RBP23.72■■□□□ 1.39
CTSB-201ENST00000345125 DAPK1P53355 1430 aa23.72■■□□□ 1.39
CTSB-201ENST00000345125 ABCA8O94911 1581 aa23.71■■□□□ 1.39
CTSB-201ENST00000345125 ROCK1Q13464 1354 aa23.7■■□□□ 1.39
CTSB-201ENST00000345125 KDM6BO15054 1643 aa23.69■■□□□ 1.38
CTSB-201ENST00000345125 ITSN2Q9NZM3 1697 aa23.69■■□□□ 1.38
CTSB-201ENST00000345125 ABCC5O15440 1437 aa23.68■■□□□ 1.38
CTSB-201ENST00000345125 TONSLQ96HA7 1378 aa23.68■■□□□ 1.38
CTSB-201ENST00000345125 YTHDC1Q96MU7 727 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms