RNA–Protein interactions for RNA: ENST00000345125.7

CTSB-201, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-201ENST00000345125 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
CTSB-201ENST00000345125 CCDC180Q9P1Z9 1646 aa30.66■■■□□ 2.5
CTSB-201ENST00000345125 ZCCHC6Q5VYS8 1495 aaKnown RBP30.08■■■□□ 2.41
CTSB-201ENST00000345125 SHROOM4Q9ULL8 1493 aa29.67■■■□□ 2.34
CTSB-201ENST00000345125 DCAF1Q9Y4B6 1507 aa29.41■■■□□ 2.3
CTSB-201ENST00000345125 DCAF8L2P0C7V8 631 aa29.27■■■□□ 2.28
CTSB-201ENST00000345125 SUPT5HO00267 1087 aaKnown RBP28.89■■■□□ 2.21
CTSB-201ENST00000345125 MYO15BQ96JP2 1530 aa28.77■■■□□ 2.2
CTSB-201ENST00000345125 ABCC9O60706 1549 aa28.46■■■□□ 2.15
CTSB-201ENST00000345125 NACADO15069 1562 aa28.41■■■□□ 2.14
CTSB-201ENST00000345125 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
CTSB-201ENST00000345125 CHIC1Q5VXU3 224 aa28.01■■■□□ 2.07
CTSB-201ENST00000345125 RB1CC1Q8TDY2 1594 aa28■■■□□ 2.07
CTSB-201ENST00000345125 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
CTSB-201ENST00000345125 CECR2Q9BXF3 1484 aa27.68■■■□□ 2.02
CTSB-201ENST00000345125 MROH2BQ7Z745 1585 aa27.59■■■□□ 2.01
CTSB-201ENST00000345125 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
CTSB-201ENST00000345125 BAZ1AQ9NRL2 1556 aaPredicted RBP27.43■■□□□ 1.98
CTSB-201ENST00000345125 WIZO95785 1651 aa27.4■■□□□ 1.98
CTSB-201ENST00000345125 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
CTSB-201ENST00000345125 BICRAQ9NZM4 1560 aa27.19■■□□□ 1.94
CTSB-201ENST00000345125 TOP2AP11388 1531 aaKnown RBP27.09■■□□□ 1.93
CTSB-201ENST00000345125 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
CTSB-201ENST00000345125 PABPN1Q86U42 306 aaKnown RBP eCLIP27.02■■□□□ 1.92
CTSB-201ENST00000345125 LOC105371045A0A1W2PR82 267 aa27.01■■□□□ 1.91
CTSB-201ENST00000345125 EIF4G1Q04637 1599 aaKnown RBP26.96■■□□□ 1.91
CTSB-201ENST00000345125 SMARCA2P51531 1590 aa26.88■■□□□ 1.89
CTSB-201ENST00000345125 CCDC88BA6NC98 1476 aa26.86■■□□□ 1.89
CTSB-201ENST00000345125 PEG3Q9GZU2 1588 aa26.85■■□□□ 1.89
CTSB-201ENST00000345125 FAM9AQ8IZU1 332 aaPredicted RBP26.65■■□□□ 1.86
CTSB-201ENST00000345125 ATAD2BQ9ULI0 1458 aa26.61■■□□□ 1.85
CTSB-201ENST00000345125 ABCC8Q09428 1581 aa26.56■■□□□ 1.84
CTSB-201ENST00000345125 PCGF6Q9BYE7 350 aa26.53■■□□□ 1.84
CTSB-201ENST00000345125 BAZ1BQ9UIG0 1483 aaKnown RBP26.5■■□□□ 1.83
CTSB-201ENST00000345125 HRCP23327 699 aa26.34■■□□□ 1.81
CTSB-201ENST00000345125 TRIM26Q12899 539 aaPredicted RBP26.3■■□□□ 1.8
CTSB-201ENST00000345125 EHMT2Q96KQ7 1210 aa26.28■■□□□ 1.8
CTSB-201ENST00000345125 WRNQ14191 1432 aaPredicted RBP eCLIP26.27■■□□□ 1.8
CTSB-201ENST00000345125 HMGXB3Q12766 1538 aa26.25■■□□□ 1.79
CTSB-201ENST00000345125 NCAPD3P42695 1498 aa26.24■■□□□ 1.79
CTSB-201ENST00000345125 EEA1Q15075 1411 aa26.23■■□□□ 1.79
CTSB-201ENST00000345125 SOGA1O94964 1423 aa26.21■■□□□ 1.79
CTSB-201ENST00000345125 SYNJ1O43426 1573 aa26.15■■□□□ 1.78
CTSB-201ENST00000345125 RUSC2Q8N2Y8 1516 aa26.08■■□□□ 1.77
CTSB-201ENST00000345125 CSRNP3Q8WYN3 585 aa26.07■■□□□ 1.76
CTSB-201ENST00000345125 TNIKQ9UKE5 1360 aa25.99■■□□□ 1.75
CTSB-201ENST00000345125 TOP2BQ02880 1626 aa25.95■■□□□ 1.74
CTSB-201ENST00000345125 GOLGA3Q08378 1498 aa25.93■■□□□ 1.74
CTSB-201ENST00000345125 CEP162Q5TB80 1403 aa25.93■■□□□ 1.74
CTSB-201ENST00000345125 BIVM-ERCC5R4GMW8 1640 aa25.9■■□□□ 1.74
CTSB-201ENST00000345125 CFTRP13569 1480 aa25.87■■□□□ 1.73
CTSB-201ENST00000345125 KIF21BO75037 1637 aa25.87■■□□□ 1.73
CTSB-201ENST00000345125 CEP164Q9UPV0 1460 aa25.85■■□□□ 1.73
CTSB-201ENST00000345125 UBTFP17480 764 aaKnown RBP25.81■■□□□ 1.72
CTSB-201ENST00000345125 CC2D2AQ9P2K1 1620 aa25.74■■□□□ 1.71
CTSB-201ENST00000345125 CUX1P39880 1505 aa25.74■■□□□ 1.71
CTSB-201ENST00000345125 PRDM2Q13029 1718 aa25.73■■□□□ 1.71
CTSB-201ENST00000345125 PPARGC1BQ86YN6 1023 aaKnown RBP25.7■■□□□ 1.7
CTSB-201ENST00000345125 RAPGEF2Q9Y4G8 1499 aa25.64■■□□□ 1.7
CTSB-201ENST00000345125 CADPSQ9ULU8 1353 aa25.64■■□□□ 1.69
CTSB-201ENST00000345125 ZEB1P37275 1124 aaPredicted RBP25.59■■□□□ 1.69
CTSB-201ENST00000345125 CLIP1P30622 1438 aa25.56■■□□□ 1.68
CTSB-201ENST00000345125 ERICH3Q5RHP9 1530 aa25.56■■□□□ 1.68
CTSB-201ENST00000345125 PRXQ9BXM0 1461 aa25.55■■□□□ 1.68
CTSB-201ENST00000345125 KIF27Q86VH2 1401 aa25.53■■□□□ 1.68
CTSB-201ENST00000345125 VPS8Q8N3P4 1428 aa25.44■■□□□ 1.66
CTSB-201ENST00000345125 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
CTSB-201ENST00000345125 TTBK1Q5TCY1 1321 aaPredicted RBP25.36■■□□□ 1.65
CTSB-201ENST00000345125 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
CTSB-201ENST00000345125 CUX2O14529 1486 aa25.32■■□□□ 1.64
CTSB-201ENST00000345125 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
CTSB-201ENST00000345125 IGF1RP08069 1367 aa25.25■■□□□ 1.63
CTSB-201ENST00000345125 NESP48681 1621 aa25.23■■□□□ 1.63
CTSB-201ENST00000345125 RANGAP1P46060 587 aaPredicted RBP25.23■■□□□ 1.63
CTSB-201ENST00000345125 ARAP1Q96P48 1450 aa25.23■■□□□ 1.63
CTSB-201ENST00000345125 LAMC3Q9Y6N6 1575 aa25.21■■□□□ 1.63
CTSB-201ENST00000345125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.2■■□□□ 1.62
CTSB-201ENST00000345125 APLP2Q06481 763 aa25.19■■□□□ 1.62
CTSB-201ENST00000345125 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
CTSB-201ENST00000345125 CCER1Q8TC90 406 aaPredicted RBP25.15■■□□□ 1.62
CTSB-201ENST00000345125 CARMIL1Q5VZK9 1371 aa25.13■■□□□ 1.61
CTSB-201ENST00000345125 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
CTSB-201ENST00000345125 POLA1P09884 1462 aaPredicted RBP25.11■■□□□ 1.61
CTSB-201ENST00000345125 ARHGAP35Q9NRY4 1499 aa25.09■■□□□ 1.61
CTSB-201ENST00000345125 RAD54L2Q9Y4B4 1467 aa25.06■■□□□ 1.6
CTSB-201ENST00000345125 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
CTSB-201ENST00000345125 PDS5BQ9NTI5 1447 aa25.01■■□□□ 1.59
CTSB-201ENST00000345125 DNAJC5BQ9UF47 199 aa24.97■■□□□ 1.59
CTSB-201ENST00000345125 WDR97A6NE52 1622 aa24.96■■□□□ 1.59
CTSB-201ENST00000345125 CUL7Q14999 1698 aa24.94■■□□□ 1.58
CTSB-201ENST00000345125 HNRNPUL2Q1KMD3 747 aaKnown RBP24.9■■□□□ 1.58
CTSB-201ENST00000345125 KANK4Q5T7N3 995 aaPredicted RBP24.9■■□□□ 1.58
CTSB-201ENST00000345125 KIF21AQ7Z4S6 1674 aa24.89■■□□□ 1.57
CTSB-201ENST00000345125 ABCA5Q8WWZ7 1642 aa24.85■■□□□ 1.57
CTSB-201ENST00000345125 MAP3K1Q13233 1512 aa24.83■■□□□ 1.57
CTSB-201ENST00000345125 RRBP1Q9P2E9 1410 aaKnown RBP24.8■■□□□ 1.56
CTSB-201ENST00000345125 CTTNBP2Q8WZ74 1663 aa24.77■■□□□ 1.56
CTSB-201ENST00000345125 TIAM1Q13009 1591 aa24.77■■□□□ 1.56
CTSB-201ENST00000345125 FHAD1B1AJZ9 1412 aa24.77■■□□□ 1.56
CTSB-201ENST00000345125 EFCAB5A4FU69 1503 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms