RNA–Protein interactions for RNA: ENST00000344680.8

RTN2-202, Transcript of reticulon 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN2, Length 2,063 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-202ENST00000344680 AQRO60306 1485 aaKnown RBP eCLIP38.47■■■■□ 3.75
RTN2-202ENST00000344680 CTTNBP2Q8WZ74 1663 aa38.38■■■■□ 3.73
RTN2-202ENST00000344680 MYT1Q01538 1121 aa38.36■■■■□ 3.73
RTN2-202ENST00000344680 PBRM1Q86U86 1689 aa38.34■■■■□ 3.73
RTN2-202ENST00000344680 EFCAB5A4FU69 1503 aa38.32■■■■□ 3.72
RTN2-202ENST00000344680 EIF4G3O43432 1585 aaKnown RBP38.32■■■■□ 3.72
RTN2-202ENST00000344680 GRIN2BQ13224 1484 aa38.31■■■■□ 3.72
RTN2-202ENST00000344680 FHAD1B1AJZ9 1412 aa38.3■■■■□ 3.72
RTN2-202ENST00000344680 ADAMTS12P58397 1594 aa38.21■■■■□ 3.71
RTN2-202ENST00000344680 MAP3K1Q13233 1512 aa38.2■■■■□ 3.71
RTN2-202ENST00000344680 KANK4Q5T7N3 995 aaPredicted RBP38.19■■■■□ 3.7
RTN2-202ENST00000344680 FHOD3Q2V2M9 1422 aa38.12■■■■□ 3.69
RTN2-202ENST00000344680 P3H3Q8IVL6 736 aa38.12■■■■□ 3.69
RTN2-202ENST00000344680 SAMD9Q5K651 1589 aa38.08■■■■□ 3.69
RTN2-202ENST00000344680 SNAPC4Q5SXM2 1469 aa38.07■■■■□ 3.68
RTN2-202ENST00000344680 TIAM1Q13009 1591 aa38.06■■■■□ 3.68
RTN2-202ENST00000344680 SCAF1Q9H7N4 1312 aaKnown RBP38.05■■■■□ 3.68
RTN2-202ENST00000344680 PCF11O94913 1555 aaKnown RBP38.02■■■■□ 3.68
RTN2-202ENST00000344680 FMN1Q68DA7 1419 aa38.01■■■■□ 3.68
RTN2-202ENST00000344680 CASKIN1Q8WXD9 1431 aa38.01■■■■□ 3.67
RTN2-202ENST00000344680 FYCO1Q9BQS8 1478 aa38■■■■□ 3.67
RTN2-202ENST00000344680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.98■■■■□ 3.67
RTN2-202ENST00000344680 MAGI1Q96QZ7 1491 aaPredicted RBP37.96■■■■□ 3.67
RTN2-202ENST00000344680 IQGAP2Q13576 1575 aa37.92■■■■□ 3.66
RTN2-202ENST00000344680 RRBP1Q9P2E9 1410 aaKnown RBP37.92■■■■□ 3.66
RTN2-202ENST00000344680 LRRC9Q6ZRR7 1453 aa37.91■■■■□ 3.66
RTN2-202ENST00000344680 CCER1Q8TC90 406 aaPredicted RBP37.91■■■■□ 3.66
RTN2-202ENST00000344680 CFAP43Q8NDM7 1665 aa37.9■■■■□ 3.66
RTN2-202ENST00000344680 HNRNPUL2Q1KMD3 747 aaKnown RBP37.87■■■■□ 3.65
RTN2-202ENST00000344680 GRIN2AQ12879 1464 aa37.84■■■■□ 3.65
RTN2-202ENST00000344680 SYNJ2O15056 1496 aa37.84■■■■□ 3.65
RTN2-202ENST00000344680 KIAA0586Q9BVV6 1533 aa37.81■■■■□ 3.64
RTN2-202ENST00000344680 CHMP7Q8WUX9 453 aaPredicted RBP37.8■■■■□ 3.64
RTN2-202ENST00000344680 UGGT2Q9NYU1 1516 aa37.78■■■■□ 3.64
RTN2-202ENST00000344680 ATP1B4Q9UN42 357 aaPredicted RBP37.78■■■■□ 3.64
RTN2-202ENST00000344680 FBLN2P98095 1184 aa37.78■■■■□ 3.64
RTN2-202ENST00000344680 CCNB3Q8WWL7 1395 aa37.74■■■■□ 3.63
RTN2-202ENST00000344680 PHLDB1Q86UU1 1377 aa37.62■■■■□ 3.61
RTN2-202ENST00000344680 CHD1O14646 1710 aa37.59■■■■□ 3.61
RTN2-202ENST00000344680 CEP170Q5SW79 1584 aa37.58■■■■□ 3.61
RTN2-202ENST00000344680 DISP1Q96F81 1524 aa37.56■■■■□ 3.6
RTN2-202ENST00000344680 NUP160Q12769 1436 aa37.56■■■■□ 3.6
RTN2-202ENST00000344680 LRRIQ1Q96JM4 1722 aa37.55■■■■□ 3.6
RTN2-202ENST00000344680 KIAA0556O60303 1618 aa37.53■■■■□ 3.6
RTN2-202ENST00000344680 CCDC18Q5T9S5 1454 aa37.51■■■■□ 3.6
RTN2-202ENST00000344680 HECW1Q76N89 1606 aa37.49■■■■□ 3.59
RTN2-202ENST00000344680 MTUS2Q5JR59 1369 aa37.49■■■■□ 3.59
RTN2-202ENST00000344680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.41■■■■□ 3.58
RTN2-202ENST00000344680 EHBP1L1Q8N3D4 1523 aa37.4■■■■□ 3.58
RTN2-202ENST00000344680 EPRSP07814 1512 aaKnown RBP37.39■■■■□ 3.58
RTN2-202ENST00000344680 ACIN1Q9UKV3 1341 aaKnown RBP37.39■■■■□ 3.58
RTN2-202ENST00000344680 JPH4Q96JJ6 628 aa37.33■■■■□ 3.57
RTN2-202ENST00000344680 NCOA2Q15596 1464 aa37.32■■■■□ 3.56
RTN2-202ENST00000344680 FGD6Q6ZV73 1430 aa37.3■■■■□ 3.56
RTN2-202ENST00000344680 SUPT6HQ7KZ85 1726 aaKnown RBP37.3■■■■□ 3.56
RTN2-202ENST00000344680 FAM50AQ14320 339 aaKnown RBP37.3■■■■□ 3.56
RTN2-202ENST00000344680 CARMIL2Q6F5E8 1435 aa37.3■■■■□ 3.56
RTN2-202ENST00000344680 MAGI3Q5TCQ9 1506 aa37.3■■■■□ 3.56
RTN2-202ENST00000344680 ITGAEP38570 1179 aa37.29■■■■□ 3.56
RTN2-202ENST00000344680 ARHGEF11O15085 1522 aa37.27■■■■□ 3.56
RTN2-202ENST00000344680 CLSPNQ9HAW4 1339 aa37.24■■■■□ 3.55
RTN2-202ENST00000344680 MYOM3Q5VTT5 1437 aa37.23■■■■□ 3.55
RTN2-202ENST00000344680 CDK13Q14004 1512 aaKnown RBP37.23■■■■□ 3.55
RTN2-202ENST00000344680 RAPGEF6Q8TEU7 1601 aa37.23■■■■□ 3.55
RTN2-202ENST00000344680 DHX57Q6P158 1386 aaKnown RBP37.22■■■■□ 3.55
RTN2-202ENST00000344680 NUP153P49790 1475 aaKnown RBP37.21■■■■□ 3.55
RTN2-202ENST00000344680 CLASP1Q7Z460 1538 aa37.15■■■■□ 3.54
RTN2-202ENST00000344680 SETD5Q9C0A6 1442 aa37.14■■■■□ 3.54
RTN2-202ENST00000344680 CENPBP07199 599 aaPredicted RBP37.12■■■■□ 3.53
RTN2-202ENST00000344680 RAB3GAP2Q9H2M9 1393 aa37.11■■■■□ 3.53
RTN2-202ENST00000344680 SHROOM2Q13796 1616 aa37.07■■■■□ 3.53
RTN2-202ENST00000344680 PLB1Q6P1J6 1458 aa37.06■■■■□ 3.52
RTN2-202ENST00000344680 OSCARQ8IYS5 282 aa37.05■■■■□ 3.52
RTN2-202ENST00000344680 PRG4Q92954 1404 aaPredicted RBP37.05■■■■□ 3.52
RTN2-202ENST00000344680 ARID3CA6NKF2 412 aa37.05■■■■□ 3.52
RTN2-202ENST00000344680 CDK11AQ9UQ88 783 aaPredicted RBP37.05■■■■□ 3.52
RTN2-202ENST00000344680 NEUROD1Q13562 356 aa37.01■■■■□ 3.52
RTN2-202ENST00000344680 PTPN23Q9H3S7 1636 aa37.01■■■■□ 3.51
RTN2-202ENST00000344680 TCOF1Q13428 1488 aaKnown RBP37■■■■□ 3.51
RTN2-202ENST00000344680 MIA2Q96PC5 1412 aa36.99■■■■□ 3.51
RTN2-202ENST00000344680 ABCA8O94911 1581 aa36.97■■■■□ 3.51
RTN2-202ENST00000344680 ERCC6L2Q5T890 1561 aa36.93■■■■□ 3.5
RTN2-202ENST00000344680 PTPRKQ15262 1439 aa36.92■■■■□ 3.5
RTN2-202ENST00000344680 TROQ12816 1431 aaPredicted RBP36.91■■■■□ 3.5
RTN2-202ENST00000344680 PTPRGP23470 1445 aa36.87■■■■□ 3.49
RTN2-202ENST00000344680 GTF3C3Q9Y5Q9 886 aa36.86■■■■□ 3.49
RTN2-202ENST00000344680 HFM1A2PYH4 1435 aa36.85■■■■□ 3.49
RTN2-202ENST00000344680 ATP10BO94823 1461 aa36.79■■■■□ 3.48
RTN2-202ENST00000344680 ADCY10Q96PN6 1610 aa36.77■■■■□ 3.48
RTN2-202ENST00000344680 MAPKBP1O60336 1514 aa36.77■■■■□ 3.48
RTN2-202ENST00000344680 NAIPQ13075 1403 aa36.74■■■■□ 3.47
RTN2-202ENST00000344680 PLEKHD1A6NEE1 506 aa36.7■■■■□ 3.47
RTN2-202ENST00000344680 AKNAQ7Z591 1439 aa36.69■■■■□ 3.46
RTN2-202ENST00000344680 DIEXFQ68CQ4 756 aaKnown RBP36.66■■■■□ 3.46
RTN2-202ENST00000344680 UACAQ9BZF9 1416 aa36.66■■■■□ 3.46
RTN2-202ENST00000344680 ZNF316A6NFI3 1004 aaPredicted RBP36.65■■■■□ 3.46
RTN2-202ENST00000344680 KIF14Q15058 1648 aa36.65■■■■□ 3.46
RTN2-202ENST00000344680 GPATCH8Q9UKJ3 1502 aaKnown RBP36.64■■■■□ 3.46
RTN2-202ENST00000344680 ITSN2Q9NZM3 1697 aa36.62■■■■□ 3.45
RTN2-202ENST00000344680 DAPK1P53355 1430 aa36.58■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms