RNA–Protein interactions for RNA: ENST00000344229.7

RNF13-201, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-201ENST00000344229 RRBP1Q9P2E9 1410 aaKnown RBP19.09■□□□□ 0.65
RNF13-201ENST00000344229 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
RNF13-201ENST00000344229 P3H3Q8IVL6 736 aa19.08■□□□□ 0.65
RNF13-201ENST00000344229 GAPVD1Q14C86 1478 aa19.07■□□□□ 0.64
RNF13-201ENST00000344229 MAP3K1Q13233 1512 aa19.06■□□□□ 0.64
RNF13-201ENST00000344229 PCF11O94913 1555 aaKnown RBP19.06■□□□□ 0.64
RNF13-201ENST00000344229 FHOD3Q2V2M9 1422 aa19.04■□□□□ 0.64
RNF13-201ENST00000344229 CFAP43Q8NDM7 1665 aa19.02■□□□□ 0.64
RNF13-201ENST00000344229 EFCAB5A4FU69 1503 aa19.02■□□□□ 0.63
RNF13-201ENST00000344229 FHAD1B1AJZ9 1412 aa19.01■□□□□ 0.63
RNF13-201ENST00000344229 LRRC9Q6ZRR7 1453 aa19■□□□□ 0.63
RNF13-201ENST00000344229 CCNB3Q8WWL7 1395 aa18.99■□□□□ 0.63
RNF13-201ENST00000344229 PBRM1Q86U86 1689 aa18.99■□□□□ 0.63
RNF13-201ENST00000344229 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
RNF13-201ENST00000344229 SAMD9Q5K651 1589 aa18.94■□□□□ 0.62
RNF13-201ENST00000344229 FYCO1Q9BQS8 1478 aa18.93■□□□□ 0.62
RNF13-201ENST00000344229 CASKIN1Q8WXD9 1431 aa18.92■□□□□ 0.62
RNF13-201ENST00000344229 DHX57Q6P158 1386 aaKnown RBP18.92■□□□□ 0.62
RNF13-201ENST00000344229 PHLDB1Q86UU1 1377 aa18.92■□□□□ 0.62
RNF13-201ENST00000344229 LRRIQ1Q96JM4 1722 aa18.92■□□□□ 0.62
RNF13-201ENST00000344229 ATP1B4Q9UN42 357 aaPredicted RBP18.91■□□□□ 0.62
RNF13-201ENST00000344229 AQRO60306 1485 aaKnown RBP eCLIP18.91■□□□□ 0.62
RNF13-201ENST00000344229 SNAPC4Q5SXM2 1469 aa18.89■□□□□ 0.61
RNF13-201ENST00000344229 ITGAEP38570 1179 aa18.88■□□□□ 0.61
RNF13-201ENST00000344229 DIEXFQ68CQ4 756 aaKnown RBP18.86■□□□□ 0.61
RNF13-201ENST00000344229 FMN1Q68DA7 1419 aa18.86■□□□□ 0.61
RNF13-201ENST00000344229 ADAMTS12P58397 1594 aa18.86■□□□□ 0.61
RNF13-201ENST00000344229 WDR62O43379 1518 aa18.85■□□□□ 0.61
RNF13-201ENST00000344229 ZNF316A6NFI3 1004 aaPredicted RBP18.83■□□□□ 0.61
RNF13-201ENST00000344229 ZNF608Q9ULD9 1512 aaPredicted RBP18.83■□□□□ 0.61
RNF13-201ENST00000344229 CLSPNQ9HAW4 1339 aa18.79■□□□□ 0.6
RNF13-201ENST00000344229 GRIN2BQ13224 1484 aa18.79■□□□□ 0.6
RNF13-201ENST00000344229 IFT140Q96RY7 1462 aa18.78■□□□□ 0.6
RNF13-201ENST00000344229 RAB3GAP2Q9H2M9 1393 aa18.77■□□□□ 0.6
RNF13-201ENST00000344229 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
RNF13-201ENST00000344229 IQGAP2Q13576 1575 aa18.76■□□□□ 0.59
RNF13-201ENST00000344229 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
RNF13-201ENST00000344229 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
RNF13-201ENST00000344229 SETD5Q9C0A6 1442 aa18.71■□□□□ 0.59
RNF13-201ENST00000344229 ERCC6Q03468 1493 aa18.7■□□□□ 0.58
RNF13-201ENST00000344229 MAPKBP1O60336 1514 aa18.69■□□□□ 0.58
RNF13-201ENST00000344229 MAGI3Q5TCQ9 1506 aa18.69■□□□□ 0.58
RNF13-201ENST00000344229 MTUS2Q5JR59 1369 aa18.69■□□□□ 0.58
RNF13-201ENST00000344229 FGD6Q6ZV73 1430 aa18.68■□□□□ 0.58
RNF13-201ENST00000344229 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.67■□□□□ 0.58
RNF13-201ENST00000344229 SUPT6HQ7KZ85 1726 aaKnown RBP18.66■□□□□ 0.58
RNF13-201ENST00000344229 NCOA2Q15596 1464 aa18.66■□□□□ 0.58
RNF13-201ENST00000344229 UGGT2Q9NYU1 1516 aa18.65■□□□□ 0.58
RNF13-201ENST00000344229 EHBP1L1Q8N3D4 1523 aa18.64■□□□□ 0.57
RNF13-201ENST00000344229 HECW1Q76N89 1606 aa18.63■□□□□ 0.57
RNF13-201ENST00000344229 GRIN2AQ12879 1464 aa18.61■□□□□ 0.57
RNF13-201ENST00000344229 ARHGEF11O15085 1522 aa18.61■□□□□ 0.57
RNF13-201ENST00000344229 CCDC18Q5T9S5 1454 aa18.61■□□□□ 0.57
RNF13-201ENST00000344229 PTPRKQ15262 1439 aa18.6■□□□□ 0.57
RNF13-201ENST00000344229 KIAA0586Q9BVV6 1533 aa18.6■□□□□ 0.57
RNF13-201ENST00000344229 EPRSP07814 1512 aaKnown RBP18.59■□□□□ 0.57
RNF13-201ENST00000344229 MYOM3Q5VTT5 1437 aa18.59■□□□□ 0.57
RNF13-201ENST00000344229 DISP1Q96F81 1524 aa18.59■□□□□ 0.57
RNF13-201ENST00000344229 CDK13Q14004 1512 aaKnown RBP18.59■□□□□ 0.57
RNF13-201ENST00000344229 KIAA0556O60303 1618 aa18.58■□□□□ 0.57
RNF13-201ENST00000344229 PTPN23Q9H3S7 1636 aa18.56■□□□□ 0.56
RNF13-201ENST00000344229 CEP170Q5SW79 1584 aa18.54■□□□□ 0.56
RNF13-201ENST00000344229 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
RNF13-201ENST00000344229 ACIN1Q9UKV3 1341 aaKnown RBP18.53■□□□□ 0.56
RNF13-201ENST00000344229 ARID3CA6NKF2 412 aa18.53■□□□□ 0.56
RNF13-201ENST00000344229 MIER1Q8N108 512 aa18.53■□□□□ 0.56
RNF13-201ENST00000344229 SIN3AQ96ST3 1273 aa18.51■□□□□ 0.55
RNF13-201ENST00000344229 SYNJ2O15056 1496 aa18.5■□□□□ 0.55
RNF13-201ENST00000344229 HFM1A2PYH4 1435 aa18.49■□□□□ 0.55
RNF13-201ENST00000344229 NEUROD1Q13562 356 aa18.49■□□□□ 0.55
RNF13-201ENST00000344229 RAPGEF6Q8TEU7 1601 aa18.48■□□□□ 0.55
RNF13-201ENST00000344229 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
RNF13-201ENST00000344229 TCOF1Q13428 1488 aaKnown RBP18.47■□□□□ 0.55
RNF13-201ENST00000344229 NUP153P49790 1475 aaKnown RBP18.47■□□□□ 0.55
RNF13-201ENST00000344229 NAIPQ13075 1403 aa18.46■□□□□ 0.55
RNF13-201ENST00000344229 FBLN2P98095 1184 aa18.44■□□□□ 0.54
RNF13-201ENST00000344229 NUP160Q12769 1436 aa18.42■□□□□ 0.54
RNF13-201ENST00000344229 GTF3C3Q9Y5Q9 886 aa18.41■□□□□ 0.54
RNF13-201ENST00000344229 GCC2Q8IWJ2 1684 aa18.4■□□□□ 0.54
RNF13-201ENST00000344229 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
RNF13-201ENST00000344229 MIA2Q96PC5 1412 aa18.39■□□□□ 0.53
RNF13-201ENST00000344229 PLB1Q6P1J6 1458 aa18.38■□□□□ 0.53
RNF13-201ENST00000344229 KDM6BO15054 1643 aa18.38■□□□□ 0.53
RNF13-201ENST00000344229 CHIC2Q9UKJ5 165 aa18.38■□□□□ 0.53
RNF13-201ENST00000344229 RRP7BPQ9NSQ0 103 aa18.37■□□□□ 0.53
RNF13-201ENST00000344229 JPH4Q96JJ6 628 aa18.36■□□□□ 0.53
RNF13-201ENST00000344229 CENPBP07199 599 aaPredicted RBP18.35■□□□□ 0.53
RNF13-201ENST00000344229 YTHDC1Q96MU7 727 aaKnown RBP18.35■□□□□ 0.53
RNF13-201ENST00000344229 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
RNF13-201ENST00000344229 TIMELESSQ9UNS1 1208 aa18.32■□□□□ 0.52
RNF13-201ENST00000344229 ZNF644Q9H582 1327 aaPredicted RBP18.31■□□□□ 0.52
RNF13-201ENST00000344229 DENND4BO75064 1496 aaPredicted RBP18.3■□□□□ 0.52
RNF13-201ENST00000344229 PPP1R15AO75807 674 aaPredicted RBP18.3■□□□□ 0.52
RNF13-201ENST00000344229 CARMIL2Q6F5E8 1435 aa18.3■□□□□ 0.52
RNF13-201ENST00000344229 KIF14Q15058 1648 aa18.3■□□□□ 0.52
RNF13-201ENST00000344229 AKNAQ7Z591 1439 aa18.3■□□□□ 0.52
RNF13-201ENST00000344229 DNMT1P26358 1616 aaKnown RBP18.29■□□□□ 0.52
RNF13-201ENST00000344229 DAPK1P53355 1430 aa18.28■□□□□ 0.52
RNF13-201ENST00000344229 TROQ12816 1431 aaPredicted RBP18.28■□□□□ 0.52
RNF13-201ENST00000344229 ADCY10Q96PN6 1610 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms