RNA–Protein interactions for RNA: ENST00000344229.7

RNF13-201, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-201ENST00000344229 NISCHQ9Y2I1 1504 aa27.44■■□□□ 1.98
RNF13-201ENST00000344229 CCDC180Q9P1Z9 1646 aa23.57■■□□□ 1.36
RNF13-201ENST00000344229 ZCCHC6Q5VYS8 1495 aaKnown RBP23.15■■□□□ 1.3
RNF13-201ENST00000344229 SHROOM4Q9ULL8 1493 aa23■■□□□ 1.27
RNF13-201ENST00000344229 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
RNF13-201ENST00000344229 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
RNF13-201ENST00000344229 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
RNF13-201ENST00000344229 MYO15BQ96JP2 1530 aa22.03■■□□□ 1.12
RNF13-201ENST00000344229 ABCC9O60706 1549 aa21.98■■□□□ 1.11
RNF13-201ENST00000344229 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
RNF13-201ENST00000344229 NACADO15069 1562 aa21.82■■□□□ 1.08
RNF13-201ENST00000344229 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
RNF13-201ENST00000344229 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
RNF13-201ENST00000344229 RB1CC1Q8TDY2 1594 aa21.52■■□□□ 1.04
RNF13-201ENST00000344229 CECR2Q9BXF3 1484 aa21.41■■□□□ 1.02
RNF13-201ENST00000344229 UNC13AQ9UPW8 1703 aa21.34■■□□□ 1.01
RNF13-201ENST00000344229 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
RNF13-201ENST00000344229 WIZO95785 1651 aa21.22■□□□□ 0.99
RNF13-201ENST00000344229 BAZ1AQ9NRL2 1556 aaPredicted RBP21.09■□□□□ 0.97
RNF13-201ENST00000344229 BICRAQ9NZM4 1560 aa21■□□□□ 0.95
RNF13-201ENST00000344229 SMARCA4P51532 1647 aa21■□□□□ 0.95
RNF13-201ENST00000344229 LOC105371045A0A1W2PR82 267 aa20.98■□□□□ 0.95
RNF13-201ENST00000344229 PABPN1Q86U42 306 aaKnown RBP eCLIP20.91■□□□□ 0.94
RNF13-201ENST00000344229 TRIM41Q8WV44 630 aa20.88■□□□□ 0.93
RNF13-201ENST00000344229 TOP2AP11388 1531 aaKnown RBP20.85■□□□□ 0.93
RNF13-201ENST00000344229 EIF4G1Q04637 1599 aaKnown RBP20.82■□□□□ 0.92
RNF13-201ENST00000344229 SMARCA2P51531 1590 aa20.75■□□□□ 0.91
RNF13-201ENST00000344229 CCDC88BA6NC98 1476 aa20.74■□□□□ 0.91
RNF13-201ENST00000344229 FAM9AQ8IZU1 332 aaPredicted RBP20.67■□□□□ 0.9
RNF13-201ENST00000344229 PEG3Q9GZU2 1588 aa20.64■□□□□ 0.89
RNF13-201ENST00000344229 ABCC8Q09428 1581 aa20.57■□□□□ 0.88
RNF13-201ENST00000344229 PCGF6Q9BYE7 350 aa20.56■□□□□ 0.88
RNF13-201ENST00000344229 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
RNF13-201ENST00000344229 EHMT2Q96KQ7 1210 aa20.47■□□□□ 0.87
RNF13-201ENST00000344229 BAZ1BQ9UIG0 1483 aaKnown RBP20.39■□□□□ 0.86
RNF13-201ENST00000344229 HRCP23327 699 aa20.35■□□□□ 0.85
RNF13-201ENST00000344229 TRIM26Q12899 539 aaPredicted RBP20.28■□□□□ 0.84
RNF13-201ENST00000344229 SOGA1O94964 1423 aa20.28■□□□□ 0.84
RNF13-201ENST00000344229 RUSC2Q8N2Y8 1516 aa20.23■□□□□ 0.83
RNF13-201ENST00000344229 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
RNF13-201ENST00000344229 SYNJ1O43426 1573 aa20.21■□□□□ 0.83
RNF13-201ENST00000344229 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
RNF13-201ENST00000344229 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
RNF13-201ENST00000344229 EEA1Q15075 1411 aa20.1■□□□□ 0.81
RNF13-201ENST00000344229 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.81
RNF13-201ENST00000344229 PPARGC1BQ86YN6 1023 aaKnown RBP20.01■□□□□ 0.79
RNF13-201ENST00000344229 TNIKQ9UKE5 1360 aa20■□□□□ 0.79
RNF13-201ENST00000344229 TOP2BQ02880 1626 aa20■□□□□ 0.79
RNF13-201ENST00000344229 CEP162Q5TB80 1403 aa19.99■□□□□ 0.79
RNF13-201ENST00000344229 PELP1Q8IZL8 1130 aaKnown RBP19.99■□□□□ 0.79
RNF13-201ENST00000344229 BIVM-ERCC5R4GMW8 1640 aa19.97■□□□□ 0.79
RNF13-201ENST00000344229 GOLGA3Q08378 1498 aa19.95■□□□□ 0.78
RNF13-201ENST00000344229 KIF21BO75037 1637 aa19.92■□□□□ 0.78
RNF13-201ENST00000344229 UBTFP17480 764 aaKnown RBP19.92■□□□□ 0.78
RNF13-201ENST00000344229 CFTRP13569 1480 aa19.91■□□□□ 0.78
RNF13-201ENST00000344229 CC2D2AQ9P2K1 1620 aa19.88■□□□□ 0.77
RNF13-201ENST00000344229 CEP164Q9UPV0 1460 aa19.87■□□□□ 0.77
RNF13-201ENST00000344229 PRDM2Q13029 1718 aa19.87■□□□□ 0.77
RNF13-201ENST00000344229 CUX1P39880 1505 aa19.87■□□□□ 0.77
RNF13-201ENST00000344229 RAPGEF2Q9Y4G8 1499 aa19.8■□□□□ 0.76
RNF13-201ENST00000344229 TTBK1Q5TCY1 1321 aaPredicted RBP19.72■□□□□ 0.75
RNF13-201ENST00000344229 CADPSQ9ULU8 1353 aa19.72■□□□□ 0.75
RNF13-201ENST00000344229 CLIP1P30622 1438 aa19.69■□□□□ 0.74
RNF13-201ENST00000344229 PRXQ9BXM0 1461 aa19.67■□□□□ 0.74
RNF13-201ENST00000344229 ERICH3Q5RHP9 1530 aa19.64■□□□□ 0.74
RNF13-201ENST00000344229 ZEB1P37275 1124 aaPredicted RBP19.64■□□□□ 0.73
RNF13-201ENST00000344229 KIF27Q86VH2 1401 aa19.62■□□□□ 0.73
RNF13-201ENST00000344229 RANGAP1P46060 587 aaPredicted RBP19.59■□□□□ 0.73
RNF13-201ENST00000344229 VPS8Q8N3P4 1428 aa19.57■□□□□ 0.72
RNF13-201ENST00000344229 FGD5Q6ZNL6 1462 aa19.54■□□□□ 0.72
RNF13-201ENST00000344229 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
RNF13-201ENST00000344229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.54■□□□□ 0.72
RNF13-201ENST00000344229 NESP48681 1621 aa19.53■□□□□ 0.72
RNF13-201ENST00000344229 CUX2O14529 1486 aa19.51■□□□□ 0.71
RNF13-201ENST00000344229 ARAP1Q96P48 1450 aa19.47■□□□□ 0.71
RNF13-201ENST00000344229 IGF1RP08069 1367 aa19.46■□□□□ 0.71
RNF13-201ENST00000344229 DNMBPQ6XZF7 1577 aa19.43■□□□□ 0.7
RNF13-201ENST00000344229 CCER1Q8TC90 406 aaPredicted RBP19.42■□□□□ 0.7
RNF13-201ENST00000344229 DNAJC5BQ9UF47 199 aa19.42■□□□□ 0.7
RNF13-201ENST00000344229 TOPBP1Q92547 1522 aa19.4■□□□□ 0.7
RNF13-201ENST00000344229 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
RNF13-201ENST00000344229 LAMC3Q9Y6N6 1575 aa19.38■□□□□ 0.69
RNF13-201ENST00000344229 ARHGAP35Q9NRY4 1499 aa19.36■□□□□ 0.69
RNF13-201ENST00000344229 POLA1P09884 1462 aaPredicted RBP19.36■□□□□ 0.69
RNF13-201ENST00000344229 APLP2Q06481 763 aa19.35■□□□□ 0.69
RNF13-201ENST00000344229 CARMIL1Q5VZK9 1371 aa19.34■□□□□ 0.69
RNF13-201ENST00000344229 MYT1Q01538 1121 aa19.34■□□□□ 0.69
RNF13-201ENST00000344229 ABCA10Q8WWZ4 1543 aa19.32■□□□□ 0.68
RNF13-201ENST00000344229 URB2Q14146 1524 aaKnown RBP19.31■□□□□ 0.68
RNF13-201ENST00000344229 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
RNF13-201ENST00000344229 KANK4Q5T7N3 995 aaPredicted RBP19.27■□□□□ 0.68
RNF13-201ENST00000344229 KIF21AQ7Z4S6 1674 aa19.27■□□□□ 0.68
RNF13-201ENST00000344229 WDR97A6NE52 1622 aa19.27■□□□□ 0.68
RNF13-201ENST00000344229 SCAF1Q9H7N4 1312 aaKnown RBP19.24■□□□□ 0.67
RNF13-201ENST00000344229 PDS5BQ9NTI5 1447 aa19.19■□□□□ 0.66
RNF13-201ENST00000344229 CUL7Q14999 1698 aa19.18■□□□□ 0.66
RNF13-201ENST00000344229 ABCA5Q8WWZ7 1642 aa19.16■□□□□ 0.66
RNF13-201ENST00000344229 CTTNBP2Q8WZ74 1663 aa19.14■□□□□ 0.65
RNF13-201ENST00000344229 TDRD9Q8NDG6 1382 aaKnown RBP19.12■□□□□ 0.65
RNF13-201ENST00000344229 TIAM1Q13009 1591 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms