RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 SYNJ2O15056 1496 aa34.57■■■■□ 3.13
CACNB1-201ENST00000344140 FBLN2P98095 1184 aa34.55■■■■□ 3.12
CACNB1-201ENST00000344140 ARAP1Q96P48 1450 aa34.55■■■■□ 3.12
CACNB1-201ENST00000344140 CHMP7Q8WUX9 453 aaPredicted RBP34.54■■■■□ 3.12
CACNB1-201ENST00000344140 GRIN2AQ12879 1464 aa34.5■■■■□ 3.11
CACNB1-201ENST00000344140 CHD1O14646 1710 aa34.48■■■■□ 3.11
CACNB1-201ENST00000344140 EFCAB5A4FU69 1503 aa34.47■■■■□ 3.11
CACNB1-201ENST00000344140 IQGAP2Q13576 1575 aa34.37■■■■□ 3.09
CACNB1-201ENST00000344140 KIAA0586Q9BVV6 1533 aa34.35■■■■□ 3.09
CACNB1-201ENST00000344140 TRIM26Q12899 539 aaPredicted RBP34.33■■■■□ 3.09
CACNB1-201ENST00000344140 SAMD9Q5K651 1589 aa34.31■■■■□ 3.08
CACNB1-201ENST00000344140 APLP2Q06481 763 aa34.3■■■■□ 3.08
CACNB1-201ENST00000344140 NUP160Q12769 1436 aa34.27■■■■□ 3.08
CACNB1-201ENST00000344140 P3H3Q8IVL6 736 aa34.25■■■■□ 3.07
CACNB1-201ENST00000344140 FHOD3Q2V2M9 1422 aa34.25■■■■□ 3.07
CACNB1-201ENST00000344140 PPARGC1BQ86YN6 1023 aaKnown RBP34.24■■■■□ 3.07
CACNB1-201ENST00000344140 CEP170Q5SW79 1584 aa34.24■■■■□ 3.07
CACNB1-201ENST00000344140 UGGT2Q9NYU1 1516 aa34.23■■■■□ 3.07
CACNB1-201ENST00000344140 PCGF6Q9BYE7 350 aa34.21■■■■□ 3.07
CACNB1-201ENST00000344140 OSCARQ8IYS5 282 aa34.2■■■■□ 3.06
CACNB1-201ENST00000344140 FMN1Q68DA7 1419 aa34.18■■■■□ 3.06
CACNB1-201ENST00000344140 CASKIN1Q8WXD9 1431 aa34.07■■■■□ 3.04
CACNB1-201ENST00000344140 CLASP1Q7Z460 1538 aa34.07■■■■□ 3.04
CACNB1-201ENST00000344140 FYCO1Q9BQS8 1478 aa34.06■■■■□ 3.04
CACNB1-201ENST00000344140 MAP3K1Q13233 1512 aa34.05■■■■□ 3.04
CACNB1-201ENST00000344140 PCF11O94913 1555 aaKnown RBP34.05■■■■□ 3.04
CACNB1-201ENST00000344140 DISP1Q96F81 1524 aa34.03■■■■□ 3.04
CACNB1-201ENST00000344140 KIAA0556O60303 1618 aa34.01■■■■□ 3.03
CACNB1-201ENST00000344140 JPH4Q96JJ6 628 aa34.01■■■■□ 3.03
CACNB1-201ENST00000344140 TTBK1Q5TCY1 1321 aaPredicted RBP34■■■■□ 3.03
CACNB1-201ENST00000344140 CARMIL2Q6F5E8 1435 aa33.94■■■■□ 3.02
CACNB1-201ENST00000344140 TIAM1Q13009 1591 aa33.94■■■■□ 3.02
CACNB1-201ENST00000344140 ATP1B4Q9UN42 357 aaPredicted RBP33.9■■■■□ 3.02
CACNB1-201ENST00000344140 KANK4Q5T7N3 995 aaPredicted RBP33.9■■■■□ 3.02
CACNB1-201ENST00000344140 SHROOM2Q13796 1616 aa33.89■■■■□ 3.01
CACNB1-201ENST00000344140 CFAP43Q8NDM7 1665 aa33.86■■■■□ 3.01
CACNB1-201ENST00000344140 LRRC9Q6ZRR7 1453 aa33.81■■■■□ 3
CACNB1-201ENST00000344140 PRG4Q92954 1404 aaPredicted RBP33.81■■■■□ 3
CACNB1-201ENST00000344140 HECW1Q76N89 1606 aa33.78■■■■□ 3
CACNB1-201ENST00000344140 CCDC18Q5T9S5 1454 aa33.75■■■□□ 2.99
CACNB1-201ENST00000344140 ERCC6L2Q5T890 1561 aa33.68■■■□□ 2.98
CACNB1-201ENST00000344140 LRRIQ1Q96JM4 1722 aa33.67■■■□□ 2.98
CACNB1-201ENST00000344140 RAPGEF6Q8TEU7 1601 aa33.67■■■□□ 2.98
CACNB1-201ENST00000344140 EPRSP07814 1512 aaKnown RBP33.66■■■□□ 2.98
CACNB1-201ENST00000344140 ARHGEF11O15085 1522 aa33.63■■■□□ 2.97
CACNB1-201ENST00000344140 MTUS2Q5JR59 1369 aa33.61■■■□□ 2.97
CACNB1-201ENST00000344140 NUP153P49790 1475 aaKnown RBP33.59■■■□□ 2.97
CACNB1-201ENST00000344140 PTPRGP23470 1445 aa33.58■■■□□ 2.97
CACNB1-201ENST00000344140 PLB1Q6P1J6 1458 aa33.58■■■□□ 2.97
CACNB1-201ENST00000344140 RIMBP3CA6NJZ7 1639 aa33.56■■■□□ 2.96
CACNB1-201ENST00000344140 RIMBP3BA6NNM3 1639 aa33.56■■■□□ 2.96
CACNB1-201ENST00000344140 RIMBP3Q9UFD9 1639 aa33.56■■■□□ 2.96
CACNB1-201ENST00000344140 RRBP1Q9P2E9 1410 aaKnown RBP33.55■■■□□ 2.96
CACNB1-201ENST00000344140 EHBP1L1Q8N3D4 1523 aa33.54■■■□□ 2.96
CACNB1-201ENST00000344140 ABCA8O94911 1581 aa33.54■■■□□ 2.96
CACNB1-201ENST00000344140 CDK13Q14004 1512 aaKnown RBP33.53■■■□□ 2.96
CACNB1-201ENST00000344140 DNAJC5Q9H3Z4 198 aa33.48■■■□□ 2.95
CACNB1-201ENST00000344140 PHLDB1Q86UU1 1377 aa33.47■■■□□ 2.95
CACNB1-201ENST00000344140 CCNB3Q8WWL7 1395 aa33.46■■■□□ 2.95
CACNB1-201ENST00000344140 CDK11AQ9UQ88 783 aaPredicted RBP33.46■■■□□ 2.95
CACNB1-201ENST00000344140 MAGI3Q5TCQ9 1506 aa33.45■■■□□ 2.94
CACNB1-201ENST00000344140 ARID3CA6NKF2 412 aa33.44■■■□□ 2.94
CACNB1-201ENST00000344140 SUPT6HQ7KZ85 1726 aaKnown RBP33.43■■■□□ 2.94
CACNB1-201ENST00000344140 NCOA2Q15596 1464 aa33.4■■■□□ 2.94
CACNB1-201ENST00000344140 UACAQ9BZF9 1416 aa33.4■■■□□ 2.94
CACNB1-201ENST00000344140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.39■■■□□ 2.94
CACNB1-201ENST00000344140 HNRNPUL2Q1KMD3 747 aaKnown RBP33.39■■■□□ 2.94
CACNB1-201ENST00000344140 ATP10BO94823 1461 aa33.32■■■□□ 2.92
CACNB1-201ENST00000344140 CYB5RLQ6IPT4 315 aa33.31■■■□□ 2.92
CACNB1-201ENST00000344140 TROQ12816 1431 aaPredicted RBP33.29■■■□□ 2.92
CACNB1-201ENST00000344140 MYOM3Q5VTT5 1437 aa33.29■■■□□ 2.92
CACNB1-201ENST00000344140 ABCC2Q92887 1545 aa33.28■■■□□ 2.92
CACNB1-201ENST00000344140 FGD6Q6ZV73 1430 aa33.27■■■□□ 2.92
CACNB1-201ENST00000344140 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.27■■■□□ 2.92
CACNB1-201ENST00000344140 UHRF1BP1LA0JNW5 1464 aa33.23■■■□□ 2.91
CACNB1-201ENST00000344140 PLEKHD1A6NEE1 506 aa33.22■■■□□ 2.91
CACNB1-201ENST00000344140 FAM50AQ14320 339 aaKnown RBP33.19■■■□□ 2.9
CACNB1-201ENST00000344140 ADCY10Q96PN6 1610 aa33.18■■■□□ 2.9
CACNB1-201ENST00000344140 HRCP23327 699 aa33.17■■■□□ 2.9
CACNB1-201ENST00000344140 MIA2Q96PC5 1412 aa33.14■■■□□ 2.9
CACNB1-201ENST00000344140 KDM5BQ9UGL1 1544 aa33.08■■■□□ 2.89
CACNB1-201ENST00000344140 PTPN23Q9H3S7 1636 aa33.07■■■□□ 2.89
CACNB1-201ENST00000344140 KIF14Q15058 1648 aa33.07■■■□□ 2.88
CACNB1-201ENST00000344140 ITGAEP38570 1179 aa33.07■■■□□ 2.88
CACNB1-201ENST00000344140 TCOF1Q13428 1488 aaKnown RBP33.06■■■□□ 2.88
CACNB1-201ENST00000344140 NPM1P06748 294 aaKnown RBP eCLIP33.05■■■□□ 2.88
CACNB1-201ENST00000344140 ZCCHC11Q5TAX3 1644 aaKnown RBP33.02■■■□□ 2.88
CACNB1-201ENST00000344140 ITSN2Q9NZM3 1697 aa32.98■■■□□ 2.87
CACNB1-201ENST00000344140 ABCC10Q5T3U5 1492 aa32.98■■■□□ 2.87
CACNB1-201ENST00000344140 GPATCH8Q9UKJ3 1502 aaKnown RBP32.97■■■□□ 2.87
CACNB1-201ENST00000344140 CCER1Q8TC90 406 aaPredicted RBP32.96■■■□□ 2.87
CACNB1-201ENST00000344140 ZEB1P37275 1124 aaPredicted RBP32.95■■■□□ 2.86
CACNB1-201ENST00000344140 CFDP1Q9UEE9 299 aaPredicted RBP32.92■■■□□ 2.86
CACNB1-201ENST00000344140 SETD5Q9C0A6 1442 aa32.85■■■□□ 2.85
CACNB1-201ENST00000344140 CDC42BPAQ5VT25 1732 aa32.84■■■□□ 2.85
CACNB1-201ENST00000344140 PTPRKQ15262 1439 aa32.83■■■□□ 2.85
CACNB1-201ENST00000344140 ASXL2Q76L83 1435 aa32.81■■■□□ 2.84
CACNB1-201ENST00000344140 MAPKBP1O60336 1514 aa32.8■■■□□ 2.84
CACNB1-201ENST00000344140 CAMSAP2Q08AD1 1489 aa32.8■■■□□ 2.84
CACNB1-201ENST00000344140 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms