RNA–Protein interactions for RNA: ENST00000343632.8

GGA1-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA1, Length 3,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-203ENST00000343632 EFCAB5A4FU69 1503 aa26.78■■□□□ 1.88
GGA1-203ENST00000343632 FHAD1B1AJZ9 1412 aa26.77■■□□□ 1.88
GGA1-203ENST00000343632 TIAM1Q13009 1591 aa26.76■■□□□ 1.87
GGA1-203ENST00000343632 FHOD3Q2V2M9 1422 aa26.75■■□□□ 1.87
GGA1-203ENST00000343632 MAP3K1Q13233 1512 aa26.75■■□□□ 1.87
GGA1-203ENST00000343632 PBRM1Q86U86 1689 aa26.74■■□□□ 1.87
GGA1-203ENST00000343632 PCF11O94913 1555 aaKnown RBP26.73■■□□□ 1.87
GGA1-203ENST00000343632 WDR62O43379 1518 aa26.73■■□□□ 1.87
GGA1-203ENST00000343632 AQRO60306 1485 aaKnown RBP eCLIP26.71■■□□□ 1.874e-7■■■■□ 26.1
GGA1-203ENST00000343632 RRBP1Q9P2E9 1410 aaKnown RBP26.69■■□□□ 1.86
GGA1-203ENST00000343632 IFT140Q96RY7 1462 aa26.66■■□□□ 1.86
GGA1-203ENST00000343632 CFAP43Q8NDM7 1665 aa26.64■■□□□ 1.86
GGA1-203ENST00000343632 LRRC9Q6ZRR7 1453 aa26.63■■□□□ 1.85
GGA1-203ENST00000343632 ERCC6Q03468 1493 aa26.63■■□□□ 1.85
GGA1-203ENST00000343632 SAMD9Q5K651 1589 aa26.62■■□□□ 1.85
GGA1-203ENST00000343632 FYCO1Q9BQS8 1478 aa26.62■■□□□ 1.85
GGA1-203ENST00000343632 ADAMTS12P58397 1594 aa26.62■■□□□ 1.85
GGA1-203ENST00000343632 GRIN2BQ13224 1484 aa26.61■■□□□ 1.85
GGA1-203ENST00000343632 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
GGA1-203ENST00000343632 CASKIN1Q8WXD9 1431 aa26.6■■□□□ 1.85
GGA1-203ENST00000343632 ATP1B4Q9UN42 357 aaPredicted RBP26.59■■□□□ 1.85
GGA1-203ENST00000343632 CCNB3Q8WWL7 1395 aa26.59■■□□□ 1.85
GGA1-203ENST00000343632 FMN1Q68DA7 1419 aa26.58■■□□□ 1.85
GGA1-203ENST00000343632 THOC2Q8NI27 1593 aaKnown RBP26.54■■□□□ 1.84
GGA1-203ENST00000343632 SNAPC4Q5SXM2 1469 aa26.53■■□□□ 1.84
GGA1-203ENST00000343632 PHLDB1Q86UU1 1377 aa26.48■■□□□ 1.83
GGA1-203ENST00000343632 EIF4G3O43432 1585 aaKnown RBP26.47■■□□□ 1.83
GGA1-203ENST00000343632 IQGAP2Q13576 1575 aa26.47■■□□□ 1.83
GGA1-203ENST00000343632 LRRIQ1Q96JM4 1722 aa26.4■■□□□ 1.82
GGA1-203ENST00000343632 ITGAEP38570 1179 aa26.4■■□□□ 1.82
GGA1-203ENST00000343632 DHX57Q6P158 1386 aaKnown RBP26.35■■□□□ 1.81
GGA1-203ENST00000343632 GRIN2AQ12879 1464 aa26.32■■□□□ 1.8
GGA1-203ENST00000343632 UGGT2Q9NYU1 1516 aa26.32■■□□□ 1.8
GGA1-203ENST00000343632 MTUS2Q5JR59 1369 aa26.31■■□□□ 1.8
GGA1-203ENST00000343632 FAM50AQ14320 339 aaKnown RBP26.3■■□□□ 1.8
GGA1-203ENST00000343632 KIAA0586Q9BVV6 1533 aa26.3■■□□□ 1.8
GGA1-203ENST00000343632 MAGI1Q96QZ7 1491 aaPredicted RBP26.29■■□□□ 1.8
GGA1-203ENST00000343632 CLSPNQ9HAW4 1339 aa26.27■■□□□ 1.8
GGA1-203ENST00000343632 HECW1Q76N89 1606 aa26.24■■□□□ 1.79
GGA1-203ENST00000343632 CCDC18Q5T9S5 1454 aa26.22■■□□□ 1.79
GGA1-203ENST00000343632 RAB3GAP2Q9H2M9 1393 aa26.22■■□□□ 1.79
GGA1-203ENST00000343632 SYNJ2O15056 1496 aa26.21■■□□□ 1.79
GGA1-203ENST00000343632 EHBP1L1Q8N3D4 1523 aa26.21■■□□□ 1.79
GGA1-203ENST00000343632 FGD6Q6ZV73 1430 aa26.2■■□□□ 1.79
GGA1-203ENST00000343632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.2■■□□□ 1.79
GGA1-203ENST00000343632 DISP1Q96F81 1524 aa26.2■■□□□ 1.78
GGA1-203ENST00000343632 KIAA0556O60303 1618 aa26.2■■□□□ 1.78
GGA1-203ENST00000343632 CHMP7Q8WUX9 453 aaPredicted RBP26.19■■□□□ 1.78
GGA1-203ENST00000343632 NCOA2Q15596 1464 aa26.19■■□□□ 1.78
GGA1-203ENST00000343632 SUPT6HQ7KZ85 1726 aaKnown RBP26.18■■□□□ 1.78
GGA1-203ENST00000343632 MAGI3Q5TCQ9 1506 aa26.18■■□□□ 1.78
GGA1-203ENST00000343632 SETD5Q9C0A6 1442 aa26.18■■□□□ 1.78
GGA1-203ENST00000343632 CEP170Q5SW79 1584 aa26.16■■□□□ 1.78
GGA1-203ENST00000343632 EPRSP07814 1512 aaKnown RBP26.16■■□□□ 1.78
GGA1-203ENST00000343632 FBLN2P98095 1184 aa26.13■■□□□ 1.77
GGA1-203ENST00000343632 MYOM3Q5VTT5 1437 aa26.12■■□□□ 1.77
GGA1-203ENST00000343632 ZNF316A6NFI3 1004 aaPredicted RBP26.12■■□□□ 1.77
GGA1-203ENST00000343632 CDK13Q14004 1512 aaKnown RBP26.12■■□□□ 1.77
GGA1-203ENST00000343632 ARHGEF11O15085 1522 aa26.1■■□□□ 1.77
GGA1-203ENST00000343632 DIEXFQ68CQ4 756 aaKnown RBP26.08■■□□□ 1.77
GGA1-203ENST00000343632 NUP160Q12769 1436 aa26.07■■□□□ 1.76
GGA1-203ENST00000343632 ARID3CA6NKF2 412 aa26.05■■□□□ 1.76
GGA1-203ENST00000343632 MAPKBP1O60336 1514 aa26.02■■□□□ 1.76
GGA1-203ENST00000343632 RAPGEF6Q8TEU7 1601 aa26.02■■□□□ 1.76
GGA1-203ENST00000343632 PTPN23Q9H3S7 1636 aa26.01■■□□□ 1.75
GGA1-203ENST00000343632 NUP153P49790 1475 aaKnown RBP26■■□□□ 1.75
GGA1-203ENST00000343632 PTPRKQ15262 1439 aa26■■□□□ 1.75
GGA1-203ENST00000343632 JPH4Q96JJ6 628 aa25.97■■□□□ 1.75
GGA1-203ENST00000343632 CARMIL2Q6F5E8 1435 aa25.93■■□□□ 1.74
GGA1-203ENST00000343632 TCOF1Q13428 1488 aaKnown RBP25.93■■□□□ 1.74
GGA1-203ENST00000343632 HFM1A2PYH4 1435 aa25.91■■□□□ 1.74
GGA1-203ENST00000343632 PLB1Q6P1J6 1458 aa25.9■■□□□ 1.74
GGA1-203ENST00000343632 MIA2Q96PC5 1412 aa25.87■■□□□ 1.73
GGA1-203ENST00000343632 NAIPQ13075 1403 aa25.85■■□□□ 1.73
GGA1-203ENST00000343632 CDK11AQ9UQ88 783 aaPredicted RBP25.83■■□□□ 1.73
GGA1-203ENST00000343632 CHD1O14646 1710 aa25.8■■□□□ 1.72
GGA1-203ENST00000343632 PRG4Q92954 1404 aaPredicted RBP25.78■■□□□ 1.72
GGA1-203ENST00000343632 TROQ12816 1431 aaPredicted RBP25.78■■□□□ 1.72
GGA1-203ENST00000343632 SIN3AQ96ST3 1273 aa25.78■■□□□ 1.72
GGA1-203ENST00000343632 UACAQ9BZF9 1416 aa25.76■■□□□ 1.71
GGA1-203ENST00000343632 CHIC2Q9UKJ5 165 aa25.76■■□□□ 1.71
GGA1-203ENST00000343632 ABCA8O94911 1581 aa25.76■■□□□ 1.71
GGA1-203ENST00000343632 NEUROD1Q13562 356 aa25.74■■□□□ 1.71
GGA1-203ENST00000343632 RRP7BPQ9NSQ0 103 aa25.74■■□□□ 1.71
GGA1-203ENST00000343632 GCC2Q8IWJ2 1684 aa25.73■■□□□ 1.71
GGA1-203ENST00000343632 AKNAQ7Z591 1439 aa25.71■■□□□ 1.71
GGA1-203ENST00000343632 ADCY10Q96PN6 1610 aa25.69■■□□□ 1.7
GGA1-203ENST00000343632 KIF14Q15058 1648 aa25.69■■□□□ 1.7
GGA1-203ENST00000343632 ZNF644Q9H582 1327 aaPredicted RBP25.67■■□□□ 1.7
GGA1-203ENST00000343632 DAPK1P53355 1430 aa25.67■■□□□ 1.7
GGA1-203ENST00000343632 DNMT1P26358 1616 aaKnown RBP25.66■■□□□ 1.7
GGA1-203ENST00000343632 ATP10BO94823 1461 aa25.65■■□□□ 1.7
GGA1-203ENST00000343632 ITSN2Q9NZM3 1697 aa25.64■■□□□ 1.7
GGA1-203ENST00000343632 PTPRGP23470 1445 aa25.64■■□□□ 1.7
GGA1-203ENST00000343632 KDM6BO15054 1643 aa25.64■■□□□ 1.69
GGA1-203ENST00000343632 TIMELESSQ9UNS1 1208 aa25.64■■□□□ 1.69
GGA1-203ENST00000343632 ABCC5O15440 1437 aa25.63■■□□□ 1.69
GGA1-203ENST00000343632 GPATCH8Q9UKJ3 1502 aaKnown RBP25.63■■□□□ 1.69
GGA1-203ENST00000343632 SHROOM2Q13796 1616 aa25.61■■□□□ 1.69
GGA1-203ENST00000343632 MIER1Q8N108 512 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms