RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 URB2Q14146 1524 aaKnown RBP8□□□□□ -1.13
MSL1-201ENST00000339569 IFT140Q96RY7 1462 aa7.99□□□□□ -1.13
MSL1-201ENST00000339569 FBLN2P98095 1184 aa7.98□□□□□ -1.13
MSL1-201ENST00000339569 FKBP8Q14318 412 aa7.97□□□□□ -1.13
MSL1-201ENST00000339569 EFCAB5A4FU69 1503 aa7.96□□□□□ -1.13
MSL1-201ENST00000339569 GOLGA3Q08378 1498 aa7.95□□□□□ -1.14
MSL1-201ENST00000339569 POLA1P09884 1462 aaPredicted RBP7.95□□□□□ -1.14
MSL1-201ENST00000339569 TNIKQ9UKE5 1360 aa7.95□□□□□ -1.14
MSL1-201ENST00000339569 FGD5Q6ZNL6 1462 aa7.95□□□□□ -1.14
MSL1-201ENST00000339569 KIF27Q86VH2 1401 aa7.95□□□□□ -1.14
MSL1-201ENST00000339569 ADAMTS12P58397 1594 aa7.94□□□□□ -1.14
MSL1-201ENST00000339569 SAMD9Q5K651 1589 aa7.94□□□□□ -1.14
MSL1-201ENST00000339569 MAPK8IP2Q13387 824 aaPredicted RBP7.94□□□□□ -1.14
MSL1-201ENST00000339569 AQRO60306 1485 aaKnown RBP eCLIP7.92□□□□□ -1.147e-9■■■■□ 22.9
MSL1-201ENST00000339569 MAGI1Q96QZ7 1491 aaPredicted RBP7.9□□□□□ -1.14
MSL1-201ENST00000339569 RANGAP1P46060 587 aaPredicted RBP7.89□□□□□ -1.15
MSL1-201ENST00000339569 SHROOM2Q13796 1616 aa7.88□□□□□ -1.15
MSL1-201ENST00000339569 TMEM132AQ24JP5 1023 aa7.87□□□□□ -1.15
MSL1-201ENST00000339569 CFAP43Q8NDM7 1665 aa7.87□□□□□ -1.15
MSL1-201ENST00000339569 UGGT2Q9NYU1 1516 aa7.86□□□□□ -1.15
MSL1-201ENST00000339569 RAPGEF2Q9Y4G8 1499 aa7.86□□□□□ -1.15
MSL1-201ENST00000339569 EIF4G3O43432 1585 aaKnown RBP7.86□□□□□ -1.15
MSL1-201ENST00000339569 NESP48681 1621 aa7.86□□□□□ -1.15
MSL1-201ENST00000339569 GRIN2BQ13224 1484 aa7.85□□□□□ -1.15
MSL1-201ENST00000339569 FHAD1B1AJZ9 1412 aa7.84□□□□□ -1.15
MSL1-201ENST00000339569 TRIM26Q12899 539 aaPredicted RBP7.83□□□□□ -1.16
MSL1-201ENST00000339569 ERICH6Q7L0X2 663 aa7.83□□□□□ -1.16
MSL1-201ENST00000339569 IGF1RP08069 1367 aa7.83□□□□□ -1.16
MSL1-201ENST00000339569 SOGA1O94964 1423 aa7.82□□□□□ -1.16
MSL1-201ENST00000339569 RUSC2Q8N2Y8 1516 aa7.82□□□□□ -1.16
MSL1-201ENST00000339569 TRIM41Q8WV44 630 aa7.81□□□□□ -1.16
MSL1-201ENST00000339569 GAPVD1Q14C86 1478 aa7.81□□□□□ -1.16
MSL1-201ENST00000339569 PELP1Q8IZL8 1130 aaKnown RBP7.81□□□□□ -1.16
MSL1-201ENST00000339569 PPP4R3CPQ6ZMV5 832 aa7.8□□□□□ -1.16
MSL1-201ENST00000339569 UBTFP17480 764 aaKnown RBP7.8□□□□□ -1.16
MSL1-201ENST00000339569 NUP160Q12769 1436 aa7.79□□□□□ -1.16
MSL1-201ENST00000339569 PLEKHG5O94827 1062 aa7.79□□□□□ -1.16
MSL1-201ENST00000339569 NPM2Q86SE8 214 aaKnown RBP7.78□□□□□ -1.16
MSL1-201ENST00000339569 ADCY10Q96PN6 1610 aa7.78□□□□□ -1.16
MSL1-201ENST00000339569 HRCP23327 699 aa7.78□□□□□ -1.16
MSL1-201ENST00000339569 SYNJ2O15056 1496 aa7.77□□□□□ -1.16
MSL1-201ENST00000339569 RIMBP3CA6NJZ7 1639 aa7.77□□□□□ -1.17
MSL1-201ENST00000339569 RIMBP3BA6NNM3 1639 aa7.77□□□□□ -1.17
MSL1-201ENST00000339569 RIMBP3Q9UFD9 1639 aa7.77□□□□□ -1.17
MSL1-201ENST00000339569 IQGAP2Q13576 1575 aa7.76□□□□□ -1.17
MSL1-201ENST00000339569 CLASP1Q7Z460 1538 aa7.76□□□□□ -1.17
MSL1-201ENST00000339569 FYCO1Q9BQS8 1478 aa7.76□□□□□ -1.17
MSL1-201ENST00000339569 KIAA0586Q9BVV6 1533 aa7.75□□□□□ -1.17
MSL1-201ENST00000339569 LOC105371045A0A1W2PR82 267 aa7.75□□□□□ -1.17
MSL1-201ENST00000339569 C14orf37Q86TY3 774 aa7.75□□□□□ -1.17
MSL1-201ENST00000339569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.74□□□□□ -1.17
MSL1-201ENST00000339569 VPS8Q8N3P4 1428 aa7.73□□□□□ -1.17
MSL1-201ENST00000339569 ARAP1Q96P48 1450 aa7.73□□□□□ -1.17
MSL1-201ENST00000339569 VSIG10Q8N0Z9 540 aa7.73□□□□□ -1.17
MSL1-201ENST00000339569 ARHGEF11O15085 1522 aa7.73□□□□□ -1.17
MSL1-201ENST00000339569 GRIN2AQ12879 1464 aa7.73□□□□□ -1.17
MSL1-201ENST00000339569 CARMIL1Q5VZK9 1371 aa7.73□□□□□ -1.17
MSL1-201ENST00000339569 EIF5BO60841 1220 aaKnown RBP7.72□□□□□ -1.17
MSL1-201ENST00000339569 CEP162Q5TB80 1403 aa7.72□□□□□ -1.17
MSL1-201ENST00000339569 KIAA0556O60303 1618 aa7.72□□□□□ -1.17
MSL1-201ENST00000339569 TTBK1Q5TCY1 1321 aaPredicted RBP7.71□□□□□ -1.17
MSL1-201ENST00000339569 RAD54L2Q9Y4B4 1467 aa7.71□□□□□ -1.18
MSL1-201ENST00000339569 CCDC18Q5T9S5 1454 aa7.7□□□□□ -1.18
MSL1-201ENST00000339569 CEP170Q5SW79 1584 aa7.7□□□□□ -1.18
MSL1-201ENST00000339569 HECW1Q76N89 1606 aa7.7□□□□□ -1.18
MSL1-201ENST00000339569 SNAPC4Q5SXM2 1469 aa7.7□□□□□ -1.18
MSL1-201ENST00000339569 ARHGAP35Q9NRY4 1499 aa7.7□□□□□ -1.18
MSL1-201ENST00000339569 CASKIN1Q8WXD9 1431 aa7.7□□□□□ -1.18
MSL1-201ENST00000339569 ERCC6Q03468 1493 aa7.7□□□□□ -1.18
MSL1-201ENST00000339569 CHD1O14646 1710 aa7.69□□□□□ -1.18
MSL1-201ENST00000339569 LRRIQ1Q96JM4 1722 aa7.69□□□□□ -1.18
MSL1-201ENST00000339569 TIAM1Q13009 1591 aa7.69□□□□□ -1.18
MSL1-201ENST00000339569 UHRF1BP1LA0JNW5 1464 aa7.69□□□□□ -1.18
MSL1-201ENST00000339569 ERCC6L2Q5T890 1561 aa7.68□□□□□ -1.18
MSL1-201ENST00000339569 ABCA8O94911 1581 aa7.67□□□□□ -1.18
MSL1-201ENST00000339569 FMN1Q68DA7 1419 aa7.67□□□□□ -1.18
MSL1-201ENST00000339569 CLIP1P30622 1438 aa7.65□□□□□ -1.18
MSL1-201ENST00000339569 ARAP3Q8WWN8 1544 aa7.65□□□□□ -1.18
MSL1-201ENST00000339569 DISP1Q96F81 1524 aa7.65□□□□□ -1.19
MSL1-201ENST00000339569 EHBP1L1Q8N3D4 1523 aa7.64□□□□□ -1.19
MSL1-201ENST00000339569 KDM5BQ9UGL1 1544 aa7.64□□□□□ -1.19
MSL1-201ENST00000339569 RAPGEF6Q8TEU7 1601 aa7.64□□□□□ -1.19
MSL1-201ENST00000339569 ACIN1Q9UKV3 1341 aaKnown RBP7.64□□□□□ -1.19
MSL1-201ENST00000339569 TRHP20396 242 aaPredicted RBP7.63□□□□□ -1.19
MSL1-201ENST00000339569 PCF11O94913 1555 aaKnown RBP7.62□□□□□ -1.19
MSL1-201ENST00000339569 ZNF608Q9ULD9 1512 aaPredicted RBP7.62□□□□□ -1.19
MSL1-201ENST00000339569 ITSN2Q9NZM3 1697 aa7.62□□□□□ -1.19
MSL1-201ENST00000339569 TCOF1Q13428 1488 aaKnown RBP7.62□□□□□ -1.19
MSL1-201ENST00000339569 RRBP1Q9P2E9 1410 aaKnown RBP7.61□□□□□ -1.19
MSL1-201ENST00000339569 SUPT6HQ7KZ85 1726 aaKnown RBP7.61□□□□□ -1.19
MSL1-201ENST00000339569 AKNAQ7Z591 1439 aa7.6□□□□□ -1.19
MSL1-201ENST00000339569 CROCC2H7BZ55 1655 aa7.58□□□□□ -1.2
MSL1-201ENST00000339569 FOXD4L1Q9NU39 408 aa7.58□□□□□ -1.2
MSL1-201ENST00000339569 MAST1Q9Y2H9 1570 aa7.57□□□□□ -1.2
MSL1-201ENST00000339569 BCORL1Q5H9F3 1711 aa7.56□□□□□ -1.2
MSL1-201ENST00000339569 TSHZ2Q9NRE2 1034 aa7.56□□□□□ -1.2
MSL1-201ENST00000339569 GCC2Q8IWJ2 1684 aa7.56□□□□□ -1.2
MSL1-201ENST00000339569 LRRC9Q6ZRR7 1453 aa7.56□□□□□ -1.2
MSL1-201ENST00000339569 NPM1P06748 294 aaKnown RBP eCLIP7.55□□□□□ -1.2
MSL1-201ENST00000339569 MIA2Q96PC5 1412 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms