RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 PRXQ9BXM0 1461 aa21.54■■□□□ 1.04
SRSF3-201ENST00000339436 CTTNBP2Q8WZ74 1663 aa21.49■■□□□ 1.03
SRSF3-201ENST00000339436 KIAA0586Q9BVV6 1533 aa21.47■■□□□ 1.03
SRSF3-201ENST00000339436 CSRNP3Q8WYN3 585 aa21.45■■□□□ 1.02
SRSF3-201ENST00000339436 KIF21BO75037 1637 aa21.44■■□□□ 1.02
SRSF3-201ENST00000339436 IQGAP2Q13576 1575 aa21.44■■□□□ 1.02
SRSF3-201ENST00000339436 ERCC6L2Q5T890 1561 aa21.42■■□□□ 1.02
SRSF3-201ENST00000339436 ARAP1Q96P48 1450 aa21.4■■□□□ 1.02
SRSF3-201ENST00000339436 FAM9AQ8IZU1 332 aaPredicted RBP21.39■■□□□ 1.02
SRSF3-201ENST00000339436 PRG4Q92954 1404 aaPredicted RBP21.35■■□□□ 1.01
SRSF3-201ENST00000339436 JPH4Q96JJ6 628 aa21.34■■□□□ 1.01
SRSF3-201ENST00000339436 UGGT2Q9NYU1 1516 aa21.31■■□□□ 1
SRSF3-201ENST00000339436 GOLGA3Q08378 1498 aa21.26■□□□□ 0.99
SRSF3-201ENST00000339436 KIAA0556O60303 1618 aa21.25■□□□□ 0.99
SRSF3-201ENST00000339436 DISP1Q96F81 1524 aa21.24■□□□□ 0.99
SRSF3-201ENST00000339436 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
SRSF3-201ENST00000339436 CARMIL2Q6F5E8 1435 aa21.21■□□□□ 0.99
SRSF3-201ENST00000339436 SAMD9Q5K651 1589 aa21.17■□□□□ 0.98
SRSF3-201ENST00000339436 TNIKQ9UKE5 1360 aa21.13■□□□□ 0.97
SRSF3-201ENST00000339436 ADCY10Q96PN6 1610 aa21.1■□□□□ 0.97
SRSF3-201ENST00000339436 EHMT2Q96KQ7 1210 aa21.09■□□□□ 0.97
SRSF3-201ENST00000339436 EFCAB5A4FU69 1503 aa21.09■□□□□ 0.97
SRSF3-201ENST00000339436 PTPRGP23470 1445 aa21.09■□□□□ 0.97
SRSF3-201ENST00000339436 UBTFP17480 764 aaKnown RBP21.08■□□□□ 0.96
SRSF3-201ENST00000339436 ABCC2Q92887 1545 aa21.01■□□□□ 0.95
SRSF3-201ENST00000339436 UHRF1BP1LA0JNW5 1464 aa20.99■□□□□ 0.95
SRSF3-201ENST00000339436 TTBK1Q5TCY1 1321 aaPredicted RBP20.99■□□□□ 0.95
SRSF3-201ENST00000339436 ABCA8O94911 1581 aa20.99■□□□□ 0.95
SRSF3-201ENST00000339436 UACAQ9BZF9 1416 aa20.98■□□□□ 0.95
SRSF3-201ENST00000339436 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
SRSF3-201ENST00000339436 FHOD3Q2V2M9 1422 aa20.97■□□□□ 0.95
SRSF3-201ENST00000339436 PLB1Q6P1J6 1458 aa20.96■□□□□ 0.95
SRSF3-201ENST00000339436 ARHGAP35Q9NRY4 1499 aa20.96■□□□□ 0.95
SRSF3-201ENST00000339436 P3H3Q8IVL6 736 aa20.94■□□□□ 0.94
SRSF3-201ENST00000339436 MAPKBP1O60336 1514 aa20.92■□□□□ 0.94
SRSF3-201ENST00000339436 RAPGEF6Q8TEU7 1601 aa20.92■□□□□ 0.94
SRSF3-201ENST00000339436 ZCCHC11Q5TAX3 1644 aaKnown RBP20.91■□□□□ 0.94
SRSF3-201ENST00000339436 KDM5BQ9UGL1 1544 aa20.89■□□□□ 0.94
SRSF3-201ENST00000339436 CLIP1P30622 1438 aa20.86■□□□□ 0.93
SRSF3-201ENST00000339436 KIF13AQ9H1H9 1805 aa20.85■□□□□ 0.93
SRSF3-201ENST00000339436 NPM1P06748 294 aaKnown RBP eCLIP20.83■□□□□ 0.92
SRSF3-201ENST00000339436 FMN1Q68DA7 1419 aa20.83■□□□□ 0.92
SRSF3-201ENST00000339436 CEP162Q5TB80 1403 aa20.82■□□□□ 0.92
SRSF3-201ENST00000339436 NUP153P49790 1475 aaKnown RBP20.81■□□□□ 0.92
SRSF3-201ENST00000339436 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
SRSF3-201ENST00000339436 DIP2BQ9P265 1576 aa20.8■□□□□ 0.92
SRSF3-201ENST00000339436 HECW1Q76N89 1606 aa20.78■□□□□ 0.92
SRSF3-201ENST00000339436 ASXL2Q76L83 1435 aa20.77■□□□□ 0.92
SRSF3-201ENST00000339436 PCF11O94913 1555 aaKnown RBP20.77■□□□□ 0.92
SRSF3-201ENST00000339436 ABCC10Q5T3U5 1492 aa20.76■□□□□ 0.91
SRSF3-201ENST00000339436 LRRIQ1Q96JM4 1722 aa20.75■□□□□ 0.91
SRSF3-201ENST00000339436 ATP10BO94823 1461 aa20.75■□□□□ 0.91
SRSF3-201ENST00000339436 TRHP20396 242 aaPredicted RBP20.73■□□□□ 0.91
SRSF3-201ENST00000339436 WDR7Q9Y4E6 1490 aa20.72■□□□□ 0.91
SRSF3-201ENST00000339436 FYCO1Q9BQS8 1478 aa20.69■□□□□ 0.9
SRSF3-201ENST00000339436 CASKIN1Q8WXD9 1431 aa20.68■□□□□ 0.9
SRSF3-201ENST00000339436 CDK13Q14004 1512 aaKnown RBP20.68■□□□□ 0.9
SRSF3-201ENST00000339436 GLI2P10070 1586 aa20.68■□□□□ 0.9
SRSF3-201ENST00000339436 ARID3CA6NKF2 412 aa20.68■□□□□ 0.9
SRSF3-201ENST00000339436 EPRSP07814 1512 aaKnown RBP20.67■□□□□ 0.9
SRSF3-201ENST00000339436 TSPOAP1O95153 1857 aa20.64■□□□□ 0.9
SRSF3-201ENST00000339436 MAP3K4Q9Y6R4 1608 aa20.64■□□□□ 0.89
SRSF3-201ENST00000339436 CCDC18Q5T9S5 1454 aa20.62■□□□□ 0.89
SRSF3-201ENST00000339436 FAM69CQ0P6D2 419 aa20.61■□□□□ 0.89
SRSF3-201ENST00000339436 CFAP43Q8NDM7 1665 aa20.61■□□□□ 0.89
SRSF3-201ENST00000339436 PPRC1Q5VV67 1664 aaKnown RBP20.6■□□□□ 0.89
SRSF3-201ENST00000339436 ABCA9Q8IUA7 1624 aa20.58■□□□□ 0.88
SRSF3-201ENST00000339436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.88
SRSF3-201ENST00000339436 HNRNPUL2Q1KMD3 747 aaKnown RBP20.58■□□□□ 0.88
SRSF3-201ENST00000339436 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
SRSF3-201ENST00000339436 VPS8Q8N3P4 1428 aa20.56■□□□□ 0.88
SRSF3-201ENST00000339436 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
SRSF3-201ENST00000339436 KIF14Q15058 1648 aa20.51■□□□□ 0.87
SRSF3-201ENST00000339436 MAGI3Q5TCQ9 1506 aa20.5■□□□□ 0.87
SRSF3-201ENST00000339436 PLEKHD1A6NEE1 506 aa20.5■□□□□ 0.87
SRSF3-201ENST00000339436 KCNH8Q96L42 1107 aa20.5■□□□□ 0.87
SRSF3-201ENST00000339436 TROQ12816 1431 aaPredicted RBP20.49■□□□□ 0.87
SRSF3-201ENST00000339436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.48■□□□□ 0.879e-8■□□□□ 9.5
SRSF3-201ENST00000339436 CDK11AQ9UQ88 783 aaPredicted RBP20.47■□□□□ 0.87
SRSF3-201ENST00000339436 TEX14Q8IWB6 1497 aa20.46■□□□□ 0.87
SRSF3-201ENST00000339436 CD109Q6YHK3 1445 aa20.46■□□□□ 0.87
SRSF3-201ENST00000339436 MYO5CQ9NQX4 1742 aa20.45■□□□□ 0.86
SRSF3-201ENST00000339436 TIAM1Q13009 1591 aa20.45■□□□□ 0.86
SRSF3-201ENST00000339436 EHBP1L1Q8N3D4 1523 aa20.42■□□□□ 0.86
SRSF3-201ENST00000339436 KDM6BO15054 1643 aa20.4■□□□□ 0.86
SRSF3-201ENST00000339436 MAP3K1Q13233 1512 aa20.39■□□□□ 0.85
SRSF3-201ENST00000339436 CFAP74Q9C0B2 1584 aa20.38■□□□□ 0.85
SRSF3-201ENST00000339436 CDC42BPAQ5VT25 1732 aa20.37■□□□□ 0.85
SRSF3-201ENST00000339436 ARAP3Q8WWN8 1544 aa20.36■□□□□ 0.85
SRSF3-201ENST00000339436 PREX2Q70Z35 1606 aa20.36■□□□□ 0.85
SRSF3-201ENST00000339436 MTUS2Q5JR59 1369 aa20.35■□□□□ 0.85
SRSF3-201ENST00000339436 CDC42BPBQ9Y5S2 1711 aa20.35■□□□□ 0.85
SRSF3-201ENST00000339436 SUPT6HQ7KZ85 1726 aaKnown RBP20.34■□□□□ 0.85
SRSF3-201ENST00000339436 NEO1Q92859 1461 aa20.33■□□□□ 0.84
SRSF3-201ENST00000339436 PLCH2O75038 1416 aa20.31■□□□□ 0.84
SRSF3-201ENST00000339436 FANCAO15360 1455 aa20.31■□□□□ 0.84
SRSF3-201ENST00000339436 LRRC9Q6ZRR7 1453 aa20.31■□□□□ 0.84
SRSF3-201ENST00000339436 ITSN2Q9NZM3 1697 aa20.3■□□□□ 0.84
SRSF3-201ENST00000339436 COL17A1Q9UMD9 1497 aaPredicted RBP20.28■□□□□ 0.84
SRSF3-201ENST00000339436 ARHGAP5Q13017 1502 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms