RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 KCNH8Q96L42 1107 aa13.26□□□□□ -0.29
FNDC3B-201ENST00000336824 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
FNDC3B-201ENST00000336824 TOPBP1Q92547 1522 aa13.24□□□□□ -0.29
FNDC3B-201ENST00000336824 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
FNDC3B-201ENST00000336824 RAD54L2Q9Y4B4 1467 aa13.23□□□□□ -0.29
FNDC3B-201ENST00000336824 VPS8Q8N3P4 1428 aa13.23□□□□□ -0.29
FNDC3B-201ENST00000336824 GRIN2BQ13224 1484 aa13.21□□□□□ -0.29
FNDC3B-201ENST00000336824 CFDP1Q9UEE9 299 aaPredicted RBP13.21□□□□□ -0.29
FNDC3B-201ENST00000336824 PRDM2Q13029 1718 aa13.21□□□□□ -0.3
FNDC3B-201ENST00000336824 CUX1P39880 1505 aa13.19□□□□□ -0.3
FNDC3B-201ENST00000336824 CHIC2Q9UKJ5 165 aa13.17□□□□□ -0.3
FNDC3B-201ENST00000336824 KIF21BO75037 1637 aa13.17□□□□□ -0.3
FNDC3B-201ENST00000336824 CCNB3Q8WWL7 1395 aa13.17□□□□□ -0.3
FNDC3B-201ENST00000336824 ZNF326Q5BKZ1 582 aaKnown RBP13.16□□□□□ -0.3
FNDC3B-201ENST00000336824 JPH4Q96JJ6 628 aa13.16□□□□□ -0.3
FNDC3B-201ENST00000336824 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
FNDC3B-201ENST00000336824 POLA1P09884 1462 aaPredicted RBP13.15□□□□□ -0.3
FNDC3B-201ENST00000336824 RUSC2Q8N2Y8 1516 aa13.15□□□□□ -0.3
FNDC3B-201ENST00000336824 ERICH3Q5RHP9 1530 aa13.15□□□□□ -0.3
FNDC3B-201ENST00000336824 IGF1RP08069 1367 aa13.14□□□□□ -0.31
FNDC3B-201ENST00000336824 BCANQ96GW7 911 aa13.14□□□□□ -0.31
FNDC3B-201ENST00000336824 ARHGAP35Q9NRY4 1499 aa13.13□□□□□ -0.31
FNDC3B-201ENST00000336824 STAG3Q9UJ98 1225 aa13.13□□□□□ -0.31
FNDC3B-201ENST00000336824 OSCARQ8IYS5 282 aa13.13□□□□□ -0.31
FNDC3B-201ENST00000336824 AQRO60306 1485 aaKnown RBP eCLIP13.13□□□□□ -0.313e-7■■■■□ 22.4
FNDC3B-201ENST00000336824 TONSLQ96HA7 1378 aa13.13□□□□□ -0.31
FNDC3B-201ENST00000336824 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
FNDC3B-201ENST00000336824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.316e-9■□□□□ 9.6
FNDC3B-201ENST00000336824 CUL7Q14999 1698 aa13.11□□□□□ -0.31
FNDC3B-201ENST00000336824 BIVM-ERCC5R4GMW8 1640 aa13.11□□□□□ -0.31
FNDC3B-201ENST00000336824 CCDC18Q5T9S5 1454 aa13.09□□□□□ -0.31
FNDC3B-201ENST00000336824 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
FNDC3B-201ENST00000336824 NEFLP07196 543 aa13.06□□□□□ -0.32
FNDC3B-201ENST00000336824 RRP7BPQ9NSQ0 103 aa13.06□□□□□ -0.32
FNDC3B-201ENST00000336824 ABCA10Q8WWZ4 1543 aa13.06□□□□□ -0.32
FNDC3B-201ENST00000336824 CHGAP10645 457 aaKnown RBP13.05□□□□□ -0.32
FNDC3B-201ENST00000336824 PTPRGP23470 1445 aa13.05□□□□□ -0.32
FNDC3B-201ENST00000336824 KIF21AQ7Z4S6 1674 aa13.03□□□□□ -0.32
FNDC3B-201ENST00000336824 SNAPC4Q5SXM2 1469 aa13.02□□□□□ -0.33
FNDC3B-201ENST00000336824 EFCAB5A4FU69 1503 aa13.01□□□□□ -0.33
FNDC3B-201ENST00000336824 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
FNDC3B-201ENST00000336824 YTHDC1Q96MU7 727 aaKnown RBP13.01□□□□□ -0.33
FNDC3B-201ENST00000336824 DIEXFQ68CQ4 756 aaKnown RBP13□□□□□ -0.33
FNDC3B-201ENST00000336824 ARID4BQ4LE39 1312 aaPredicted RBP12.99□□□□□ -0.33
FNDC3B-201ENST00000336824 URB2Q14146 1524 aaKnown RBP12.99□□□□□ -0.33
FNDC3B-201ENST00000336824 EFCAB2Q5VUJ9 269 aa12.99□□□□□ -0.33
FNDC3B-201ENST00000336824 MAGI1Q96QZ7 1491 aaPredicted RBP12.98□□□□□ -0.33
FNDC3B-201ENST00000336824 KANK1Q14678 1352 aa12.97□□□□□ -0.33
FNDC3B-201ENST00000336824 CNGB1Q14028 1251 aaPredicted RBP12.97□□□□□ -0.33
FNDC3B-201ENST00000336824 PLPPR3Q6T4P5 718 aa12.96□□□□□ -0.33
FNDC3B-201ENST00000336824 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.34
FNDC3B-201ENST00000336824 PRXQ9BXM0 1461 aa12.96□□□□□ -0.34
FNDC3B-201ENST00000336824 ANP32CO43423 234 aa12.95□□□□□ -0.34
FNDC3B-201ENST00000336824 RSPH4AQ5TD94 716 aa12.95□□□□□ -0.34
FNDC3B-201ENST00000336824 SYNJ2O15056 1496 aa12.93□□□□□ -0.34
FNDC3B-201ENST00000336824 IQGAP2Q13576 1575 aa12.93□□□□□ -0.34
FNDC3B-201ENST00000336824 KANK4Q5T7N3 995 aaPredicted RBP12.92□□□□□ -0.34
FNDC3B-201ENST00000336824 FYCO1Q9BQS8 1478 aa12.9□□□□□ -0.34
FNDC3B-201ENST00000336824 CLSPNQ9HAW4 1339 aa12.9□□□□□ -0.34
FNDC3B-201ENST00000336824 ANKRD30AQ9BXX3 1397 aa12.89□□□□□ -0.35
FNDC3B-201ENST00000336824 HECW1Q76N89 1606 aa12.89□□□□□ -0.35
FNDC3B-201ENST00000336824 PRG4Q92954 1404 aaPredicted RBP12.89□□□□□ -0.35
FNDC3B-201ENST00000336824 CYB5RLQ6IPT4 315 aa12.89□□□□□ -0.35
FNDC3B-201ENST00000336824 CASKIN1Q8WXD9 1431 aa12.88□□□□□ -0.35
FNDC3B-201ENST00000336824 SETD5Q9C0A6 1442 aa12.88□□□□□ -0.35
FNDC3B-201ENST00000336824 KIAA0586Q9BVV6 1533 aa12.88□□□□□ -0.35
FNDC3B-201ENST00000336824 PPP1R15AO75807 674 aaPredicted RBP12.87□□□□□ -0.35
FNDC3B-201ENST00000336824 KDM2AQ9Y2K7 1162 aa12.86□□□□□ -0.35
FNDC3B-201ENST00000336824 CTTNBP2Q8WZ74 1663 aa12.86□□□□□ -0.35
FNDC3B-201ENST00000336824 GRIN2AQ12879 1464 aa12.85□□□□□ -0.35
FNDC3B-201ENST00000336824 WDR62O43379 1518 aa12.83□□□□□ -0.36
FNDC3B-201ENST00000336824 NEFMP07197 916 aa12.83□□□□□ -0.36
FNDC3B-201ENST00000336824 PBRM1Q86U86 1689 aa12.82□□□□□ -0.36
FNDC3B-201ENST00000336824 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
FNDC3B-201ENST00000336824 WDR97A6NE52 1622 aa12.82□□□□□ -0.36
FNDC3B-201ENST00000336824 SUPT6HQ7KZ85 1726 aaKnown RBP12.8□□□□□ -0.36
FNDC3B-201ENST00000336824 HDGFP51858 240 aaKnown RBP12.79□□□□□ -0.36
FNDC3B-201ENST00000336824 LRRC9Q6ZRR7 1453 aa12.79□□□□□ -0.36
FNDC3B-201ENST00000336824 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
FNDC3B-201ENST00000336824 EHBP1L1Q8N3D4 1523 aa12.79□□□□□ -0.36
FNDC3B-201ENST00000336824 EIF4G2P78344 907 aaKnown RBP eCLIP12.79□□□□□ -0.365e-11■■■■■ 32.1
FNDC3B-201ENST00000336824 HNRNPMP52272 730 aaKnown RBP eCLIP12.78□□□□□ -0.362e-7■■■□□ 18.4
FNDC3B-201ENST00000336824 RGL3Q3MIN7 710 aa12.78□□□□□ -0.36
FNDC3B-201ENST00000336824 ARAP1Q96P48 1450 aa12.77□□□□□ -0.36
FNDC3B-201ENST00000336824 MYOM3Q5VTT5 1437 aa12.76□□□□□ -0.37
FNDC3B-201ENST00000336824 EIF4G3O43432 1585 aaKnown RBP12.76□□□□□ -0.37
FNDC3B-201ENST00000336824 SLC24A1O60721 1099 aa12.75□□□□□ -0.37
FNDC3B-201ENST00000336824 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
FNDC3B-201ENST00000336824 GGT6Q6P531 493 aa12.75□□□□□ -0.37
FNDC3B-201ENST00000336824 CDCA8Q53HL2 280 aa12.74□□□□□ -0.37
FNDC3B-201ENST00000336824 ARHGAP5Q13017 1502 aa12.74□□□□□ -0.37
FNDC3B-201ENST00000336824 NUP155O75694 1391 aa12.74□□□□□ -0.37
FNDC3B-201ENST00000336824 RAB3GAP2Q9H2M9 1393 aa12.74□□□□□ -0.37
FNDC3B-201ENST00000336824 MLECQ14165 292 aa12.73□□□□□ -0.37
FNDC3B-201ENST00000336824 TIAM1Q13009 1591 aa12.73□□□□□ -0.37
FNDC3B-201ENST00000336824 ADAMTS12P58397 1594 aa12.72□□□□□ -0.37
FNDC3B-201ENST00000336824 NCOA2Q15596 1464 aa12.72□□□□□ -0.37
FNDC3B-201ENST00000336824 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.37
FNDC3B-201ENST00000336824 FAM69CQ0P6D2 419 aa12.71□□□□□ -0.37
FNDC3B-201ENST00000336824 KIF3BO15066 747 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms