RNA–Protein interactions for RNA: ENST00000335574.9

HM13-201, Transcript of histocompatibility minor 13, humanhuman

TSL 1 (best) BASIC

Gene HM13, Length 1,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-201ENST00000335574 KANK4Q5T7N3 995 aaPredicted RBP22.98■■□□□ 1.27
HM13-201ENST00000335574 CCER1Q8TC90 406 aaPredicted RBP22.98■■□□□ 1.27
HM13-201ENST00000335574 TIAM1Q13009 1591 aa22.97■■□□□ 1.27
HM13-201ENST00000335574 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
HM13-201ENST00000335574 CFAP43Q8NDM7 1665 aa22.94■■□□□ 1.26
HM13-201ENST00000335574 PCF11O94913 1555 aaKnown RBP22.94■■□□□ 1.26
HM13-201ENST00000335574 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
HM13-201ENST00000335574 SAMD9Q5K651 1589 aa22.92■■□□□ 1.26
HM13-201ENST00000335574 ADAMTS12P58397 1594 aa22.91■■□□□ 1.26
HM13-201ENST00000335574 AQRO60306 1485 aaKnown RBP eCLIP22.89■■□□□ 1.256e-8■■■■□ 25.7
HM13-201ENST00000335574 FHOD3Q2V2M9 1422 aa22.88■■□□□ 1.25
HM13-201ENST00000335574 RRBP1Q9P2E9 1410 aaKnown RBP22.88■■□□□ 1.25
HM13-201ENST00000335574 THOC2Q8NI27 1593 aaKnown RBP22.88■■□□□ 1.25
HM13-201ENST00000335574 HNRNPUL2Q1KMD3 747 aaKnown RBP22.87■■□□□ 1.25
HM13-201ENST00000335574 GRIN2BQ13224 1484 aa22.87■■□□□ 1.25
HM13-201ENST00000335574 FYCO1Q9BQS8 1478 aa22.86■■□□□ 1.25
HM13-201ENST00000335574 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
HM13-201ENST00000335574 P3H3Q8IVL6 736 aa22.84■■□□□ 1.25
HM13-201ENST00000335574 CASKIN1Q8WXD9 1431 aa22.83■■□□□ 1.25
HM13-201ENST00000335574 LRRC9Q6ZRR7 1453 aa22.83■■□□□ 1.25
HM13-201ENST00000335574 ZNF608Q9ULD9 1512 aaPredicted RBP22.82■■□□□ 1.24
HM13-201ENST00000335574 FMN1Q68DA7 1419 aa22.8■■□□□ 1.24
HM13-201ENST00000335574 EIF4G3O43432 1585 aaKnown RBP22.78■■□□□ 1.24
HM13-201ENST00000335574 SNAPC4Q5SXM2 1469 aa22.77■■□□□ 1.24
HM13-201ENST00000335574 IQGAP2Q13576 1575 aa22.76■■□□□ 1.23
HM13-201ENST00000335574 CCNB3Q8WWL7 1395 aa22.75■■□□□ 1.23
HM13-201ENST00000335574 LRRIQ1Q96JM4 1722 aa22.73■■□□□ 1.23
HM13-201ENST00000335574 PHLDB1Q86UU1 1377 aa22.65■■□□□ 1.22
HM13-201ENST00000335574 UGGT2Q9NYU1 1516 aa22.65■■□□□ 1.22
HM13-201ENST00000335574 ATP1B4Q9UN42 357 aaPredicted RBP22.64■■□□□ 1.22
HM13-201ENST00000335574 MAGI1Q96QZ7 1491 aaPredicted RBP22.62■■□□□ 1.21
HM13-201ENST00000335574 GRIN2AQ12879 1464 aa22.62■■□□□ 1.21
HM13-201ENST00000335574 KIAA0586Q9BVV6 1533 aa22.59■■□□□ 1.21
HM13-201ENST00000335574 HECW1Q76N89 1606 aa22.56■■□□□ 1.2
HM13-201ENST00000335574 CCDC18Q5T9S5 1454 aa22.54■■□□□ 1.2
HM13-201ENST00000335574 SYNJ2O15056 1496 aa22.53■■□□□ 1.2
HM13-201ENST00000335574 DHX57Q6P158 1386 aaKnown RBP22.52■■□□□ 1.2
HM13-201ENST00000335574 SUPT6HQ7KZ85 1726 aaKnown RBP22.52■■□□□ 1.2
HM13-201ENST00000335574 KIAA0556O60303 1618 aa22.52■■□□□ 1.2
HM13-201ENST00000335574 CLSPNQ9HAW4 1339 aa22.52■■□□□ 1.2
HM13-201ENST00000335574 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.52■■□□□ 1.2
HM13-201ENST00000335574 EHBP1L1Q8N3D4 1523 aa22.52■■□□□ 1.2
HM13-201ENST00000335574 MTUS2Q5JR59 1369 aa22.51■■□□□ 1.19
HM13-201ENST00000335574 DISP1Q96F81 1524 aa22.49■■□□□ 1.19
HM13-201ENST00000335574 CEP170Q5SW79 1584 aa22.49■■□□□ 1.19
HM13-201ENST00000335574 ITGAEP38570 1179 aa22.45■■□□□ 1.19
HM13-201ENST00000335574 FGD6Q6ZV73 1430 aa22.45■■□□□ 1.18
HM13-201ENST00000335574 MAGI3Q5TCQ9 1506 aa22.45■■□□□ 1.18
HM13-201ENST00000335574 EPRSP07814 1512 aaKnown RBP22.44■■□□□ 1.18
HM13-201ENST00000335574 NCOA2Q15596 1464 aa22.44■■□□□ 1.18
HM13-201ENST00000335574 ARHGEF11O15085 1522 aa22.44■■□□□ 1.18
HM13-201ENST00000335574 FAM50AQ14320 339 aaKnown RBP22.43■■□□□ 1.18
HM13-201ENST00000335574 CHMP7Q8WUX9 453 aaPredicted RBP22.42■■□□□ 1.18
HM13-201ENST00000335574 NUP160Q12769 1436 aa22.42■■□□□ 1.18
HM13-201ENST00000335574 SETD5Q9C0A6 1442 aa22.41■■□□□ 1.18
HM13-201ENST00000335574 RAB3GAP2Q9H2M9 1393 aa22.41■■□□□ 1.18
HM13-201ENST00000335574 MYOM3Q5VTT5 1437 aa22.4■■□□□ 1.18
HM13-201ENST00000335574 RAPGEF6Q8TEU7 1601 aa22.38■■□□□ 1.17
HM13-201ENST00000335574 CDK13Q14004 1512 aaKnown RBP22.37■■□□□ 1.17
HM13-201ENST00000335574 PTPN23Q9H3S7 1636 aa22.34■■□□□ 1.17
HM13-201ENST00000335574 NUP153P49790 1475 aaKnown RBP22.31■■□□□ 1.16
HM13-201ENST00000335574 FBLN2P98095 1184 aa22.29■■□□□ 1.16
HM13-201ENST00000335574 MAPKBP1O60336 1514 aa22.28■■□□□ 1.16
HM13-201ENST00000335574 ZNF316A6NFI3 1004 aaPredicted RBP22.28■■□□□ 1.16
HM13-201ENST00000335574 TCOF1Q13428 1488 aaKnown RBP22.28■■□□□ 1.16
HM13-201ENST00000335574 CARMIL2Q6F5E8 1435 aa22.27■■□□□ 1.15
HM13-201ENST00000335574 CHD1O14646 1710 aa22.25■■□□□ 1.15
HM13-201ENST00000335574 JPH4Q96JJ6 628 aa22.24■■□□□ 1.15
HM13-201ENST00000335574 PTPRKQ15262 1439 aa22.23■■□□□ 1.15
HM13-201ENST00000335574 MIA2Q96PC5 1412 aa22.22■■□□□ 1.15
HM13-201ENST00000335574 HFM1A2PYH4 1435 aa22.21■■□□□ 1.15
HM13-201ENST00000335574 DIEXFQ68CQ4 756 aaKnown RBP22.2■■□□□ 1.14
HM13-201ENST00000335574 PLB1Q6P1J6 1458 aa22.18■■□□□ 1.14
HM13-201ENST00000335574 ARID3CA6NKF2 412 aa22.16■■□□□ 1.14
HM13-201ENST00000335574 GCC2Q8IWJ2 1684 aa22.16■■□□□ 1.14
HM13-201ENST00000335574 ABCA8O94911 1581 aa22.16■■□□□ 1.14
HM13-201ENST00000335574 ADCY10Q96PN6 1610 aa22.16■■□□□ 1.14
HM13-201ENST00000335574 NAIPQ13075 1403 aa22.14■■□□□ 1.13
HM13-201ENST00000335574 CDK11AQ9UQ88 783 aaPredicted RBP22.14■■□□□ 1.13
HM13-201ENST00000335574 TROQ12816 1431 aaPredicted RBP22.12■■□□□ 1.13
HM13-201ENST00000335574 AKNAQ7Z591 1439 aa22.1■■□□□ 1.13
HM13-201ENST00000335574 SHROOM2Q13796 1616 aa22.1■■□□□ 1.13
HM13-201ENST00000335574 ITSN2Q9NZM3 1697 aa22.1■■□□□ 1.13
HM13-201ENST00000335574 UACAQ9BZF9 1416 aa22.07■■□□□ 1.12
HM13-201ENST00000335574 DNMT1P26358 1616 aaKnown RBP22.07■■□□□ 1.12
HM13-201ENST00000335574 PRG4Q92954 1404 aaPredicted RBP22.07■■□□□ 1.12
HM13-201ENST00000335574 KIF14Q15058 1648 aa22.05■■□□□ 1.12
HM13-201ENST00000335574 ATP10BO94823 1461 aa22.01■■□□□ 1.11
HM13-201ENST00000335574 DAPK1P53355 1430 aa22■■□□□ 1.11
HM13-201ENST00000335574 TIMELESSQ9UNS1 1208 aa21.99■■□□□ 1.11
HM13-201ENST00000335574 CDC42BPAQ5VT25 1732 aa21.98■■□□□ 1.11
HM13-201ENST00000335574 GPATCH8Q9UKJ3 1502 aaKnown RBP21.98■■□□□ 1.11
HM13-201ENST00000335574 PTPRGP23470 1445 aa21.98■■□□□ 1.11
HM13-201ENST00000335574 KDM6BO15054 1643 aa21.98■■□□□ 1.11
HM13-201ENST00000335574 ROCK1Q13464 1354 aa21.97■■□□□ 1.11
HM13-201ENST00000335574 SIN3AQ96ST3 1273 aa21.96■■□□□ 1.11
HM13-201ENST00000335574 ABCC5O15440 1437 aa21.96■■□□□ 1.11
HM13-201ENST00000335574 CAMSAP2Q08AD1 1489 aa21.95■■□□□ 1.1
HM13-201ENST00000335574 RRP7BPQ9NSQ0 103 aa21.95■■□□□ 1.1
HM13-201ENST00000335574 CHIC2Q9UKJ5 165 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms