RNA–Protein interactions for RNA: ENST00000335574.9

HM13-201, Transcript of histocompatibility minor 13, humanhuman

TSL 1 (best) BASIC

Gene HM13, Length 1,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-201ENST00000335574 NISCHQ9Y2I1 1504 aa33.23■■■□□ 2.91
HM13-201ENST00000335574 CCDC180Q9P1Z9 1646 aa28.79■■■□□ 2.2
HM13-201ENST00000335574 ZCCHC6Q5VYS8 1495 aaKnown RBP28.01■■■□□ 2.08
HM13-201ENST00000335574 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
HM13-201ENST00000335574 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
HM13-201ENST00000335574 DCAF8L2P0C7V8 631 aa27.23■■□□□ 1.95
HM13-201ENST00000335574 MYO15BQ96JP2 1530 aa26.94■■□□□ 1.9
HM13-201ENST00000335574 ABCC9O60706 1549 aa26.74■■□□□ 1.87
HM13-201ENST00000335574 NACADO15069 1562 aa26.65■■□□□ 1.86
HM13-201ENST00000335574 SUPT5HO00267 1087 aaKnown RBP26.62■■□□□ 1.85
HM13-201ENST00000335574 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
HM13-201ENST00000335574 RB1CC1Q8TDY2 1594 aa26.31■■□□□ 1.8
HM13-201ENST00000335574 UNC13AQ9UPW8 1703 aa25.96■■□□□ 1.75
HM13-201ENST00000335574 RSF1Q96T23 1441 aaPredicted RBP25.95■■□□□ 1.75
HM13-201ENST00000335574 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
HM13-201ENST00000335574 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
HM13-201ENST00000335574 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
HM13-201ENST00000335574 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
HM13-201ENST00000335574 WIZO95785 1651 aa25.57■■□□□ 1.68
HM13-201ENST00000335574 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
HM13-201ENST00000335574 SMARCA4P51532 1647 aa25.47■■□□□ 1.67
HM13-201ENST00000335574 PABPN1Q86U42 306 aaKnown RBP eCLIP25.29■■□□□ 1.64
HM13-201ENST00000335574 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
HM13-201ENST00000335574 PEG3Q9GZU2 1588 aa25.13■■□□□ 1.61
HM13-201ENST00000335574 EIF4G1Q04637 1599 aaKnown RBP25.09■■□□□ 1.61
HM13-201ENST00000335574 SMARCA2P51531 1590 aa25.07■■□□□ 1.6
HM13-201ENST00000335574 CCDC88BA6NC98 1476 aa25.01■■□□□ 1.59
HM13-201ENST00000335574 TRIM41Q8WV44 630 aa24.98■■□□□ 1.59
HM13-201ENST00000335574 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.57
HM13-201ENST00000335574 LOC105371045A0A1W2PR82 267 aa24.8■■□□□ 1.56
HM13-201ENST00000335574 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
HM13-201ENST00000335574 ABCC8Q09428 1581 aa24.68■■□□□ 1.54
HM13-201ENST00000335574 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
HM13-201ENST00000335574 NCAPD3P42695 1498 aa24.57■■□□□ 1.52
HM13-201ENST00000335574 FAM9AQ8IZU1 332 aaPredicted RBP24.55■■□□□ 1.52
HM13-201ENST00000335574 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
HM13-201ENST00000335574 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
HM13-201ENST00000335574 EEA1Q15075 1411 aa24.3■■□□□ 1.48
HM13-201ENST00000335574 SOGA1O94964 1423 aa24.28■■□□□ 1.48
HM13-201ENST00000335574 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
HM13-201ENST00000335574 PRDM2Q13029 1718 aa24.22■■□□□ 1.47
HM13-201ENST00000335574 TOP2BQ02880 1626 aa24.2■■□□□ 1.46
HM13-201ENST00000335574 EHMT2Q96KQ7 1210 aa24.19■■□□□ 1.46
HM13-201ENST00000335574 BIVM-ERCC5R4GMW8 1640 aa24.19■■□□□ 1.46
HM13-201ENST00000335574 RUSC2Q8N2Y8 1516 aa24.18■■□□□ 1.46
HM13-201ENST00000335574 CFTRP13569 1480 aa24.17■■□□□ 1.46
HM13-201ENST00000335574 PCGF6Q9BYE7 350 aa24.16■■□□□ 1.46
HM13-201ENST00000335574 CSRNP3Q8WYN3 585 aa24.11■■□□□ 1.45
HM13-201ENST00000335574 TRIM26Q12899 539 aaPredicted RBP24.04■■□□□ 1.44
HM13-201ENST00000335574 KIF21BO75037 1637 aa24.03■■□□□ 1.44
HM13-201ENST00000335574 TNIKQ9UKE5 1360 aa24.01■■□□□ 1.43
HM13-201ENST00000335574 CUX1P39880 1505 aa24.01■■□□□ 1.43
HM13-201ENST00000335574 GOLGA3Q08378 1498 aa24■■□□□ 1.43
HM13-201ENST00000335574 CADPSQ9ULU8 1353 aa23.97■■□□□ 1.43
HM13-201ENST00000335574 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.42
HM13-201ENST00000335574 CEP162Q5TB80 1403 aa23.93■■□□□ 1.42
HM13-201ENST00000335574 HRCP23327 699 aa23.89■■□□□ 1.41
HM13-201ENST00000335574 UBTFP17480 764 aaKnown RBP23.84■■□□□ 1.41
HM13-201ENST00000335574 RAPGEF2Q9Y4G8 1499 aa23.76■■□□□ 1.39
HM13-201ENST00000335574 ERICH3Q5RHP9 1530 aa23.75■■□□□ 1.39
HM13-201ENST00000335574 FANCD2Q9BXW9 1451 aa23.73■■□□□ 1.39
HM13-201ENST00000335574 KIF27Q86VH2 1401 aa23.73■■□□□ 1.39
HM13-201ENST00000335574 PRXQ9BXM0 1461 aa23.72■■□□□ 1.39
HM13-201ENST00000335574 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
HM13-201ENST00000335574 NESP48681 1621 aa23.66■■□□□ 1.38
HM13-201ENST00000335574 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
HM13-201ENST00000335574 DNMBPQ6XZF7 1577 aa23.63■■□□□ 1.37
HM13-201ENST00000335574 CLIP1P30622 1438 aa23.63■■□□□ 1.37
HM13-201ENST00000335574 PPARGC1BQ86YN6 1023 aaKnown RBP23.59■■□□□ 1.37
HM13-201ENST00000335574 CUX2O14529 1486 aa23.57■■□□□ 1.36
HM13-201ENST00000335574 TOPBP1Q92547 1522 aa23.55■■□□□ 1.36
HM13-201ENST00000335574 VPS8Q8N3P4 1428 aa23.5■■□□□ 1.35
HM13-201ENST00000335574 IGF1RP08069 1367 aa23.48■■□□□ 1.35
HM13-201ENST00000335574 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
HM13-201ENST00000335574 DNAJC5BQ9UF47 199 aa23.46■■□□□ 1.35
HM13-201ENST00000335574 ABCA10Q8WWZ4 1543 aa23.45■■□□□ 1.34
HM13-201ENST00000335574 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
HM13-201ENST00000335574 PDS5BQ9NTI5 1447 aa23.44■■□□□ 1.34
HM13-201ENST00000335574 URB2Q14146 1524 aaKnown RBP23.43■■□□□ 1.34
HM13-201ENST00000335574 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
HM13-201ENST00000335574 RAD54L2Q9Y4B4 1467 aa23.4■■□□□ 1.34
HM13-201ENST00000335574 ARAP1Q96P48 1450 aa23.38■■□□□ 1.33
HM13-201ENST00000335574 CARMIL1Q5VZK9 1371 aa23.37■■□□□ 1.33
HM13-201ENST00000335574 CUL7Q14999 1698 aa23.31■■□□□ 1.32
HM13-201ENST00000335574 ZEB1P37275 1124 aaPredicted RBP23.31■■□□□ 1.32
HM13-201ENST00000335574 RANGAP1P46060 587 aaPredicted RBP23.31■■□□□ 1.32
HM13-201ENST00000335574 TTBK1Q5TCY1 1321 aaPredicted RBP23.29■■□□□ 1.32
HM13-201ENST00000335574 ARHGAP35Q9NRY4 1499 aa23.27■■□□□ 1.32
HM13-201ENST00000335574 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
HM13-201ENST00000335574 APLP2Q06481 763 aa23.22■■□□□ 1.31
HM13-201ENST00000335574 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
HM13-201ENST00000335574 CTTNBP2Q8WZ74 1663 aa23.18■■□□□ 1.3
HM13-201ENST00000335574 MRC2Q9UBG0 1479 aa23.14■■□□□ 1.3
HM13-201ENST00000335574 GAPVD1Q14C86 1478 aa23.14■■□□□ 1.29
HM13-201ENST00000335574 TDRD9Q8NDG6 1382 aaKnown RBP23.09■■□□□ 1.29
HM13-201ENST00000335574 PBRM1Q86U86 1689 aa23.07■■□□□ 1.28
HM13-201ENST00000335574 EFCAB5A4FU69 1503 aa23.04■■□□□ 1.28
HM13-201ENST00000335574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.03■■□□□ 1.28
HM13-201ENST00000335574 WDR62O43379 1518 aa23.03■■□□□ 1.28
HM13-201ENST00000335574 MAP3K1Q13233 1512 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms