RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 PRXQ9BXM0 1461 aa34.04■■■■□ 3.04
MRPL40-201ENST00000333130 KIAA0586Q9BVV6 1533 aa34.02■■■■□ 3.04
MRPL40-201ENST00000333130 SHROOM2Q13796 1616 aa34.01■■■■□ 3.03
MRPL40-201ENST00000333130 FAM9AQ8IZU1 332 aaPredicted RBP33.99■■■■□ 3.03
MRPL40-201ENST00000333130 CTTNBP2Q8WZ74 1663 aa33.94■■■■□ 3.02
MRPL40-201ENST00000333130 IQGAP2Q13576 1575 aa33.92■■■■□ 3.02
MRPL40-201ENST00000333130 JPH4Q96JJ6 628 aa33.88■■■■□ 3.01
MRPL40-201ENST00000333130 KIF21BO75037 1637 aa33.88■■■■□ 3.01
MRPL40-201ENST00000333130 PRG4Q92954 1404 aaPredicted RBP33.83■■■■□ 3.01
MRPL40-201ENST00000333130 ARAP1Q96P48 1450 aa33.81■■■■□ 3
MRPL40-201ENST00000333130 ERCC6L2Q5T890 1561 aa33.77■■■■□ 3
MRPL40-201ENST00000333130 CYB5RLQ6IPT4 315 aa33.72■■■□□ 2.99
MRPL40-201ENST00000333130 CARMIL2Q6F5E8 1435 aa33.72■■■□□ 2.99
MRPL40-201ENST00000333130 UGGT2Q9NYU1 1516 aa33.69■■■□□ 2.98
MRPL40-201ENST00000333130 GOLGA3Q08378 1498 aa33.69■■■□□ 2.98
MRPL40-201ENST00000333130 KIAA0556O60303 1618 aa33.57■■■□□ 2.96
MRPL40-201ENST00000333130 DISP1Q96F81 1524 aa33.55■■■□□ 2.96
MRPL40-201ENST00000333130 UBTFP17480 764 aaKnown RBP33.55■■■□□ 2.96
MRPL40-201ENST00000333130 TNIKQ9UKE5 1360 aa33.53■■■□□ 2.96
MRPL40-201ENST00000333130 EHMT2Q96KQ7 1210 aa33.52■■■□□ 2.96
MRPL40-201ENST00000333130 PTPRGP23470 1445 aa33.47■■■□□ 2.95
MRPL40-201ENST00000333130 SAMD9Q5K651 1589 aa33.41■■■□□ 2.94
MRPL40-201ENST00000333130 TTBK1Q5TCY1 1321 aaPredicted RBP33.4■■■□□ 2.94
MRPL40-201ENST00000333130 EFCAB5A4FU69 1503 aa33.38■■■□□ 2.93
MRPL40-201ENST00000333130 RANGAP1P46060 587 aaPredicted RBP33.34■■■□□ 2.93
MRPL40-201ENST00000333130 ADCY10Q96PN6 1610 aa33.31■■■□□ 2.92
MRPL40-201ENST00000333130 UACAQ9BZF9 1416 aa33.25■■■□□ 2.91
MRPL40-201ENST00000333130 NPM1P06748 294 aaKnown RBP eCLIP33.25■■■□□ 2.91
MRPL40-201ENST00000333130 P3H3Q8IVL6 736 aa33.25■■■□□ 2.91
MRPL40-201ENST00000333130 ABCC2Q92887 1545 aa33.23■■■□□ 2.91
MRPL40-201ENST00000333130 UHRF1BP1LA0JNW5 1464 aa33.22■■■□□ 2.91
MRPL40-201ENST00000333130 FHOD3Q2V2M9 1422 aa33.18■■■□□ 2.9
MRPL40-201ENST00000333130 ABCA8O94911 1581 aa33.15■■■□□ 2.9
MRPL40-201ENST00000333130 PLB1Q6P1J6 1458 aa33.14■■■□□ 2.9
MRPL40-201ENST00000333130 LOC105371045A0A1W2PR82 267 aa33.14■■■□□ 2.9
MRPL40-201ENST00000333130 ARHGAP35Q9NRY4 1499 aa33.12■■■□□ 2.89
MRPL40-201ENST00000333130 RAPGEF6Q8TEU7 1601 aa33.09■■■□□ 2.89
MRPL40-201ENST00000333130 MAPKBP1O60336 1514 aa33.08■■■□□ 2.89
MRPL40-201ENST00000333130 CLIP1P30622 1438 aa33.05■■■□□ 2.88
MRPL40-201ENST00000333130 FMN1Q68DA7 1419 aa33.05■■■□□ 2.88
MRPL40-201ENST00000333130 KDM5BQ9UGL1 1544 aa33.04■■■□□ 2.88
MRPL40-201ENST00000333130 ZCCHC11Q5TAX3 1644 aaKnown RBP33.04■■■□□ 2.88
MRPL40-201ENST00000333130 TRHP20396 242 aaPredicted RBP33.02■■■□□ 2.88
MRPL40-201ENST00000333130 CEP162Q5TB80 1403 aa33■■■□□ 2.87
MRPL40-201ENST00000333130 HECW1Q76N89 1606 aa32.9■■■□□ 2.86
MRPL40-201ENST00000333130 ASXL2Q76L83 1435 aa32.9■■■□□ 2.86
MRPL40-201ENST00000333130 NUP153P49790 1475 aaKnown RBP32.88■■■□□ 2.85
MRPL40-201ENST00000333130 KIF13AQ9H1H9 1805 aa32.87■■■□□ 2.85
MRPL40-201ENST00000333130 ABCC10Q5T3U5 1492 aa32.86■■■□□ 2.85
MRPL40-201ENST00000333130 DIP2BQ9P265 1576 aa32.85■■■□□ 2.85
MRPL40-201ENST00000333130 ATP10BO94823 1461 aa32.83■■■□□ 2.85
MRPL40-201ENST00000333130 ARID3CA6NKF2 412 aa32.82■■■□□ 2.84
MRPL40-201ENST00000333130 WDR7Q9Y4E6 1490 aa32.82■■■□□ 2.84
MRPL40-201ENST00000333130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.81■■■□□ 2.84
MRPL40-201ENST00000333130 HNRNPUL2Q1KMD3 747 aaKnown RBP32.81■■■□□ 2.84
MRPL40-201ENST00000333130 ATP1B4Q9UN42 357 aaPredicted RBP32.79■■■□□ 2.84
MRPL40-201ENST00000333130 PCF11O94913 1555 aaKnown RBP32.78■■■□□ 2.84
MRPL40-201ENST00000333130 FAM69CQ0P6D2 419 aa32.76■■■□□ 2.83
MRPL40-201ENST00000333130 CASKIN1Q8WXD9 1431 aa32.76■■■□□ 2.83
MRPL40-201ENST00000333130 FYCO1Q9BQS8 1478 aa32.74■■■□□ 2.83
MRPL40-201ENST00000333130 EPRSP07814 1512 aaKnown RBP32.72■■■□□ 2.83
MRPL40-201ENST00000333130 GLI2P10070 1586 aa32.71■■■□□ 2.83
MRPL40-201ENST00000333130 CCDC18Q5T9S5 1454 aa32.69■■■□□ 2.82
MRPL40-201ENST00000333130 CDK13Q14004 1512 aaKnown RBP32.69■■■□□ 2.82
MRPL40-201ENST00000333130 LRRIQ1Q96JM4 1722 aa32.64■■■□□ 2.82
MRPL40-201ENST00000333130 PLEKHD1A6NEE1 506 aa32.63■■■□□ 2.81
MRPL40-201ENST00000333130 CDK11AQ9UQ88 783 aaPredicted RBP32.63■■■□□ 2.81
MRPL40-201ENST00000333130 TSPOAP1O95153 1857 aa32.62■■■□□ 2.81
MRPL40-201ENST00000333130 KCNH8Q96L42 1107 aa32.61■■■□□ 2.81
MRPL40-201ENST00000333130 CFAP43Q8NDM7 1665 aa32.6■■■□□ 2.81
MRPL40-201ENST00000333130 MAP3K4Q9Y6R4 1608 aa32.59■■■□□ 2.81
MRPL40-201ENST00000333130 VPS8Q8N3P4 1428 aa32.58■■■□□ 2.81
MRPL40-201ENST00000333130 ABCA9Q8IUA7 1624 aa32.51■■■□□ 2.8
MRPL40-201ENST00000333130 TEX14Q8IWB6 1497 aa32.48■■■□□ 2.79
MRPL40-201ENST00000333130 CD109Q6YHK3 1445 aa32.46■■■□□ 2.79
MRPL40-201ENST00000333130 KIF14Q15058 1648 aa32.46■■■□□ 2.79
MRPL40-201ENST00000333130 TROQ12816 1431 aaPredicted RBP32.46■■■□□ 2.79
MRPL40-201ENST00000333130 PPRC1Q5VV67 1664 aaKnown RBP32.45■■■□□ 2.78
MRPL40-201ENST00000333130 MAGI3Q5TCQ9 1506 aa32.4■■■□□ 2.78
MRPL40-201ENST00000333130 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.38■■■□□ 2.777e-7■■□□□ 14.3
MRPL40-201ENST00000333130 TTC37Q6PGP7 1564 aa32.35■■■□□ 2.77
MRPL40-201ENST00000333130 MTUS2Q5JR59 1369 aa32.34■■■□□ 2.77
MRPL40-201ENST00000333130 TIAM1Q13009 1591 aa32.32■■■□□ 2.76
MRPL40-201ENST00000333130 MYO5CQ9NQX4 1742 aa32.32■■■□□ 2.76
MRPL40-201ENST00000333130 KDM6BO15054 1643 aa32.31■■■□□ 2.76
MRPL40-201ENST00000333130 EHBP1L1Q8N3D4 1523 aa32.31■■■□□ 2.76
MRPL40-201ENST00000333130 MAP3K1Q13233 1512 aa32.3■■■□□ 2.76
MRPL40-201ENST00000333130 CFAP74Q9C0B2 1584 aa32.29■■■□□ 2.76
MRPL40-201ENST00000333130 APLP2Q06481 763 aa32.28■■■□□ 2.76
MRPL40-201ENST00000333130 NEO1Q92859 1461 aa32.22■■■□□ 2.75
MRPL40-201ENST00000333130 PHLDB1Q86UU1 1377 aa32.22■■■□□ 2.75
MRPL40-201ENST00000333130 ARAP3Q8WWN8 1544 aa32.2■■■□□ 2.75
MRPL40-201ENST00000333130 SUPT6HQ7KZ85 1726 aaKnown RBP32.19■■■□□ 2.74
MRPL40-201ENST00000333130 PLCH2O75038 1416 aa32.18■■■□□ 2.74
MRPL40-201ENST00000333130 FANCAO15360 1455 aa32.18■■■□□ 2.74
MRPL40-201ENST00000333130 PREX2Q70Z35 1606 aa32.17■■■□□ 2.74
MRPL40-201ENST00000333130 ARHGAP5Q13017 1502 aa32.14■■■□□ 2.74
MRPL40-201ENST00000333130 LRRC9Q6ZRR7 1453 aa32.14■■■□□ 2.74
MRPL40-201ENST00000333130 CDC42BPAQ5VT25 1732 aa32.14■■■□□ 2.74
MRPL40-201ENST00000333130 CDC42BPBQ9Y5S2 1711 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms