RNA–Protein interactions for RNA: ENST00000330398.8

ATP6V0C-201, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V0C, Length 1,175 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-201ENST00000330398 EEA1Q15075 1411 aa30.61■■■□□ 2.49
ATP6V0C-201ENST00000330398 JPH4Q96JJ6 628 aa30.59■■■□□ 2.49
ATP6V0C-201ENST00000330398 ARAP1Q96P48 1450 aa30.58■■■□□ 2.49
ATP6V0C-201ENST00000330398 PRXQ9BXM0 1461 aa30.57■■■□□ 2.48
ATP6V0C-201ENST00000330398 CSRNP3Q8WYN3 585 aa30.56■■■□□ 2.48
ATP6V0C-201ENST00000330398 CYB5RLQ6IPT4 315 aa30.55■■■□□ 2.48
ATP6V0C-201ENST00000330398 PRG4Q92954 1404 aaPredicted RBP30.48■■■□□ 2.47
ATP6V0C-201ENST00000330398 ERCC6L2Q5T890 1561 aa30.47■■■□□ 2.47
ATP6V0C-201ENST00000330398 IQGAP2Q13576 1575 aa30.39■■■□□ 2.46
ATP6V0C-201ENST00000330398 FAM9AQ8IZU1 332 aaPredicted RBP30.34■■■□□ 2.45
ATP6V0C-201ENST00000330398 UGGT2Q9NYU1 1516 aa30.28■■■□□ 2.44
ATP6V0C-201ENST00000330398 CARMIL2Q6F5E8 1435 aa30.27■■■□□ 2.44
ATP6V0C-201ENST00000330398 CTTNBP2Q8WZ74 1663 aa30.27■■■□□ 2.44
ATP6V0C-201ENST00000330398 KIF21BO75037 1637 aa30.23■■■□□ 2.43
ATP6V0C-201ENST00000330398 DISP1Q96F81 1524 aa30.22■■■□□ 2.43
ATP6V0C-201ENST00000330398 TNIKQ9UKE5 1360 aa30.18■■■□□ 2.42
ATP6V0C-201ENST00000330398 PTPRGP23470 1445 aa30.14■■■□□ 2.42
ATP6V0C-201ENST00000330398 GOLGA3Q08378 1498 aa30.12■■■□□ 2.41
ATP6V0C-201ENST00000330398 KIAA0556O60303 1618 aa30.1■■■□□ 2.41
ATP6V0C-201ENST00000330398 ADCY10Q96PN6 1610 aa29.98■■■□□ 2.39
ATP6V0C-201ENST00000330398 UBTFP17480 764 aaKnown RBP29.96■■■□□ 2.39
ATP6V0C-201ENST00000330398 UHRF1BP1LA0JNW5 1464 aa29.95■■■□□ 2.39
ATP6V0C-201ENST00000330398 EHMT2Q96KQ7 1210 aa29.95■■■□□ 2.39
ATP6V0C-201ENST00000330398 UACAQ9BZF9 1416 aa29.95■■■□□ 2.38
ATP6V0C-201ENST00000330398 TTBK1Q5TCY1 1321 aaPredicted RBP29.95■■■□□ 2.38
ATP6V0C-201ENST00000330398 SAMD9Q5K651 1589 aa29.94■■■□□ 2.38
ATP6V0C-201ENST00000330398 NPM1P06748 294 aaKnown RBP eCLIP29.93■■■□□ 2.38
ATP6V0C-201ENST00000330398 ABCC2Q92887 1545 aa29.87■■■□□ 2.37
ATP6V0C-201ENST00000330398 TRHP20396 242 aaPredicted RBP29.86■■■□□ 2.37
ATP6V0C-201ENST00000330398 P3H3Q8IVL6 736 aa29.84■■■□□ 2.37
ATP6V0C-201ENST00000330398 MAPKBP1O60336 1514 aa29.84■■■□□ 2.37
ATP6V0C-201ENST00000330398 EFCAB5A4FU69 1503 aa29.83■■■□□ 2.37
ATP6V0C-201ENST00000330398 PLB1Q6P1J6 1458 aa29.8■■■□□ 2.36
ATP6V0C-201ENST00000330398 ABCA8O94911 1581 aa29.8■■■□□ 2.36
ATP6V0C-201ENST00000330398 KDM5BQ9UGL1 1544 aa29.8■■■□□ 2.36
ATP6V0C-201ENST00000330398 RANGAP1P46060 587 aaPredicted RBP29.78■■■□□ 2.36
ATP6V0C-201ENST00000330398 FHOD3Q2V2M9 1422 aa29.72■■■□□ 2.35
ATP6V0C-201ENST00000330398 ABCC10Q5T3U5 1492 aa29.7■■■□□ 2.35
ATP6V0C-201ENST00000330398 ARHGAP35Q9NRY4 1499 aa29.68■■■□□ 2.34
ATP6V0C-201ENST00000330398 ASXL2Q76L83 1435 aa29.65■■■□□ 2.34
ATP6V0C-201ENST00000330398 ZCCHC11Q5TAX3 1644 aaKnown RBP29.65■■■□□ 2.34
ATP6V0C-201ENST00000330398 KIF13AQ9H1H9 1805 aa29.62■■■□□ 2.33
ATP6V0C-201ENST00000330398 RAPGEF6Q8TEU7 1601 aa29.62■■■□□ 2.33
ATP6V0C-201ENST00000330398 FAM69CQ0P6D2 419 aa29.6■■■□□ 2.33
ATP6V0C-201ENST00000330398 DIP2BQ9P265 1576 aa29.6■■■□□ 2.33
ATP6V0C-201ENST00000330398 ATP10BO94823 1461 aa29.57■■■□□ 2.32
ATP6V0C-201ENST00000330398 FMN1Q68DA7 1419 aa29.57■■■□□ 2.32
ATP6V0C-201ENST00000330398 NUP153P49790 1475 aaKnown RBP29.54■■■□□ 2.32
ATP6V0C-201ENST00000330398 GLI2P10070 1586 aa29.52■■■□□ 2.32
ATP6V0C-201ENST00000330398 WDR7Q9Y4E6 1490 aa29.51■■■□□ 2.31
ATP6V0C-201ENST00000330398 CLIP1P30622 1438 aa29.51■■■□□ 2.31
ATP6V0C-201ENST00000330398 EPRSP07814 1512 aaKnown RBP29.5■■■□□ 2.31
ATP6V0C-201ENST00000330398 LOC105371045A0A1W2PR82 267 aa29.47■■■□□ 2.31
ATP6V0C-201ENST00000330398 ARID3CA6NKF2 412 aa29.44■■■□□ 2.3
ATP6V0C-201ENST00000330398 CEP162Q5TB80 1403 aa29.38■■■□□ 2.29
ATP6V0C-201ENST00000330398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.37■■■□□ 2.29
ATP6V0C-201ENST00000330398 HNRNPUL2Q1KMD3 747 aaKnown RBP29.37■■■□□ 2.29
ATP6V0C-201ENST00000330398 HECW1Q76N89 1606 aa29.36■■■□□ 2.29
ATP6V0C-201ENST00000330398 KCNH8Q96L42 1107 aa29.36■■■□□ 2.29
ATP6V0C-201ENST00000330398 CASKIN1Q8WXD9 1431 aa29.35■■■□□ 2.29
ATP6V0C-201ENST00000330398 PLEKHD1A6NEE1 506 aa29.34■■■□□ 2.29
ATP6V0C-201ENST00000330398 MAP3K4Q9Y6R4 1608 aa29.33■■■□□ 2.29
ATP6V0C-201ENST00000330398 ATP1B4Q9UN42 357 aaPredicted RBP29.29■■■□□ 2.28
ATP6V0C-201ENST00000330398 TSPOAP1O95153 1857 aa29.28■■■□□ 2.28
ATP6V0C-201ENST00000330398 CDK13Q14004 1512 aaKnown RBP29.28■■■□□ 2.28
ATP6V0C-201ENST00000330398 PPRC1Q5VV67 1664 aaKnown RBP29.26■■■□□ 2.27
ATP6V0C-201ENST00000330398 CFAP43Q8NDM7 1665 aa29.26■■■□□ 2.27
ATP6V0C-201ENST00000330398 FYCO1Q9BQS8 1478 aa29.25■■■□□ 2.27
ATP6V0C-201ENST00000330398 CD109Q6YHK3 1445 aa29.25■■■□□ 2.27
ATP6V0C-201ENST00000330398 PCF11O94913 1555 aaKnown RBP29.25■■■□□ 2.27
ATP6V0C-201ENST00000330398 CDK11AQ9UQ88 783 aaPredicted RBP29.24■■■□□ 2.27
ATP6V0C-201ENST00000330398 MAGI3Q5TCQ9 1506 aa29.22■■■□□ 2.27
ATP6V0C-201ENST00000330398 ABCA9Q8IUA7 1624 aa29.22■■■□□ 2.27
ATP6V0C-201ENST00000330398 TEX14Q8IWB6 1497 aa29.21■■■□□ 2.27
ATP6V0C-201ENST00000330398 CCDC18Q5T9S5 1454 aa29.2■■■□□ 2.26
ATP6V0C-201ENST00000330398 LRRIQ1Q96JM4 1722 aa29.19■■■□□ 2.26
ATP6V0C-201ENST00000330398 TROQ12816 1431 aaPredicted RBP29.12■■■□□ 2.25
ATP6V0C-201ENST00000330398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.1■■■□□ 2.251e-7■■□□□ 13.8
ATP6V0C-201ENST00000330398 KDM6BO15054 1643 aa29.09■■■□□ 2.25
ATP6V0C-201ENST00000330398 PHLDB1Q86UU1 1377 aa29.07■■■□□ 2.24
ATP6V0C-201ENST00000330398 VPS8Q8N3P4 1428 aa29.05■■■□□ 2.24
ATP6V0C-201ENST00000330398 COL17A1Q9UMD9 1497 aaPredicted RBP29.03■■■□□ 2.24
ATP6V0C-201ENST00000330398 TTC37Q6PGP7 1564 aa29.01■■■□□ 2.24
ATP6V0C-201ENST00000330398 NEO1Q92859 1461 aa29.01■■■□□ 2.23
ATP6V0C-201ENST00000330398 KIF14Q15058 1648 aa28.99■■■□□ 2.23
ATP6V0C-201ENST00000330398 PLCH2O75038 1416 aa28.98■■■□□ 2.23
ATP6V0C-201ENST00000330398 ARAP3Q8WWN8 1544 aa28.98■■■□□ 2.23
ATP6V0C-201ENST00000330398 FANCAO15360 1455 aa28.91■■■□□ 2.22
ATP6V0C-201ENST00000330398 MTUS2Q5JR59 1369 aa28.88■■■□□ 2.21
ATP6V0C-201ENST00000330398 AKNAQ7Z591 1439 aa28.88■■■□□ 2.21
ATP6V0C-201ENST00000330398 CFAP74Q9C0B2 1584 aa28.88■■■□□ 2.21
ATP6V0C-201ENST00000330398 MYO5CQ9NQX4 1742 aa28.87■■■□□ 2.21
ATP6V0C-201ENST00000330398 EFCAB2Q5VUJ9 269 aa28.87■■■□□ 2.21
ATP6V0C-201ENST00000330398 MAP3K1Q13233 1512 aa28.86■■■□□ 2.21
ATP6V0C-201ENST00000330398 TIAM1Q13009 1591 aa28.84■■■□□ 2.21
ATP6V0C-201ENST00000330398 EHBP1L1Q8N3D4 1523 aa28.83■■■□□ 2.21
ATP6V0C-201ENST00000330398 DENND4BO75064 1496 aaPredicted RBP28.78■■■□□ 2.2
ATP6V0C-201ENST00000330398 CDC42BPBQ9Y5S2 1711 aa28.77■■■□□ 2.2
ATP6V0C-201ENST00000330398 RAPGEF3O95398 923 aa28.77■■■□□ 2.2
ATP6V0C-201ENST00000330398 PREX2Q70Z35 1606 aa28.76■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms