RNA–Protein interactions for RNA: ENST00000330398.8

ATP6V0C-201, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V0C, Length 1,175 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-201ENST00000330398 NISCHQ9Y2I1 1504 aa44.24■■■■■ 4.67
ATP6V0C-201ENST00000330398 CCDC180Q9P1Z9 1646 aa39.29■■■■□ 3.88
ATP6V0C-201ENST00000330398 ABCC9O60706 1549 aa38.32■■■■□ 3.72
ATP6V0C-201ENST00000330398 NACADO15069 1562 aa36.95■■■■□ 3.51
ATP6V0C-201ENST00000330398 RB1CC1Q8TDY2 1594 aa36.95■■■■□ 3.51
ATP6V0C-201ENST00000330398 ZCCHC6Q5VYS8 1495 aaKnown RBP36.86■■■■□ 3.49
ATP6V0C-201ENST00000330398 DCAF8L2P0C7V8 631 aa36.85■■■■□ 3.49
ATP6V0C-201ENST00000330398 MYO15BQ96JP2 1530 aa36.84■■■■□ 3.49
ATP6V0C-201ENST00000330398 DCAF1Q9Y4B6 1507 aa36.68■■■■□ 3.46
ATP6V0C-201ENST00000330398 UNC13AQ9UPW8 1703 aa36.05■■■■□ 3.36
ATP6V0C-201ENST00000330398 PABPN1Q86U42 306 aaKnown RBP eCLIP35.84■■■■□ 3.33
ATP6V0C-201ENST00000330398 BICRAQ9NZM4 1560 aa35.83■■■■□ 3.33
ATP6V0C-201ENST00000330398 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
ATP6V0C-201ENST00000330398 SHROOM4Q9ULL8 1493 aa35.54■■■■□ 3.28
ATP6V0C-201ENST00000330398 DNAJC5BQ9UF47 199 aa35.19■■■■□ 3.22
ATP6V0C-201ENST00000330398 EIF4G1Q04637 1599 aaKnown RBP34.86■■■■□ 3.17
ATP6V0C-201ENST00000330398 CC2D2AQ9P2K1 1620 aa34.69■■■■□ 3.14
ATP6V0C-201ENST00000330398 CECR2Q9BXF3 1484 aa34.46■■■■□ 3.11
ATP6V0C-201ENST00000330398 SMARCA4P51532 1647 aa34.28■■■■□ 3.08
ATP6V0C-201ENST00000330398 BAZ1AQ9NRL2 1556 aaPredicted RBP34.28■■■■□ 3.08
ATP6V0C-201ENST00000330398 NCAPD3P42695 1498 aa34.14■■■■□ 3.06
ATP6V0C-201ENST00000330398 ATAD2BQ9ULI0 1458 aa34.12■■■■□ 3.05
ATP6V0C-201ENST00000330398 SMARCA2P51531 1590 aa34.07■■■■□ 3.05
ATP6V0C-201ENST00000330398 MROH2BQ7Z745 1585 aa34.06■■■■□ 3.04
ATP6V0C-201ENST00000330398 PEG3Q9GZU2 1588 aa34.02■■■■□ 3.04
ATP6V0C-201ENST00000330398 HMGXB3Q12766 1538 aa33.93■■■■□ 3.02
ATP6V0C-201ENST00000330398 BAZ1BQ9UIG0 1483 aaKnown RBP33.8■■■■□ 3
ATP6V0C-201ENST00000330398 RSF1Q96T23 1441 aaPredicted RBP33.74■■■□□ 2.99
ATP6V0C-201ENST00000330398 WIZO95785 1651 aa33.66■■■□□ 2.98
ATP6V0C-201ENST00000330398 TOP2AP11388 1531 aaKnown RBP33.35■■■□□ 2.93
ATP6V0C-201ENST00000330398 NESP48681 1621 aa33.18■■■□□ 2.9
ATP6V0C-201ENST00000330398 LAMC3Q9Y6N6 1575 aa33.17■■■□□ 2.9
ATP6V0C-201ENST00000330398 CADPSQ9ULU8 1353 aa33.12■■■□□ 2.89
ATP6V0C-201ENST00000330398 ERCC6Q03468 1493 aa33.01■■■□□ 2.88
ATP6V0C-201ENST00000330398 CCDC88BA6NC98 1476 aa32.98■■■□□ 2.87
ATP6V0C-201ENST00000330398 PDS5BQ9NTI5 1447 aa32.96■■■□□ 2.87
ATP6V0C-201ENST00000330398 CFTRP13569 1480 aa32.94■■■□□ 2.86
ATP6V0C-201ENST00000330398 SUPT5HO00267 1087 aaKnown RBP32.85■■■□□ 2.85
ATP6V0C-201ENST00000330398 KIF21AQ7Z4S6 1674 aa32.77■■■□□ 2.84
ATP6V0C-201ENST00000330398 CUX2O14529 1486 aa32.73■■■□□ 2.83
ATP6V0C-201ENST00000330398 FANCD2Q9BXW9 1451 aa32.69■■■□□ 2.82
ATP6V0C-201ENST00000330398 THOC2Q8NI27 1593 aaKnown RBP32.68■■■□□ 2.82
ATP6V0C-201ENST00000330398 CEP164Q9UPV0 1460 aa32.63■■■□□ 2.81
ATP6V0C-201ENST00000330398 PRDM2Q13029 1718 aa32.61■■■□□ 2.81
ATP6V0C-201ENST00000330398 MRC2Q9UBG0 1479 aa32.58■■■□□ 2.81
ATP6V0C-201ENST00000330398 WDR62O43379 1518 aa32.48■■■□□ 2.79
ATP6V0C-201ENST00000330398 URB2Q14146 1524 aaKnown RBP32.36■■■□□ 2.77
ATP6V0C-201ENST00000330398 ABCC8Q09428 1581 aa32.24■■■□□ 2.75
ATP6V0C-201ENST00000330398 TOPBP1Q92547 1522 aa32.18■■■□□ 2.74
ATP6V0C-201ENST00000330398 DNMBPQ6XZF7 1577 aa32.14■■■□□ 2.74
ATP6V0C-201ENST00000330398 IFT140Q96RY7 1462 aa31.98■■■□□ 2.71
ATP6V0C-201ENST00000330398 CUX1P39880 1505 aa31.95■■■□□ 2.71
ATP6V0C-201ENST00000330398 POLA1P09884 1462 aaPredicted RBP31.91■■■□□ 2.7
ATP6V0C-201ENST00000330398 TARBP1Q13395 1621 aaKnown RBP31.83■■■□□ 2.69
ATP6V0C-201ENST00000330398 FGD5Q6ZNL6 1462 aa31.82■■■□□ 2.68
ATP6V0C-201ENST00000330398 SOGA1O94964 1423 aa31.8■■■□□ 2.68
ATP6V0C-201ENST00000330398 ZNF608Q9ULD9 1512 aaPredicted RBP31.79■■■□□ 2.68
ATP6V0C-201ENST00000330398 WRNQ14191 1432 aaPredicted RBP eCLIP31.78■■■□□ 2.68
ATP6V0C-201ENST00000330398 RAD54L2Q9Y4B4 1467 aa31.75■■■□□ 2.67
ATP6V0C-201ENST00000330398 TOP2BQ02880 1626 aa31.71■■■□□ 2.67
ATP6V0C-201ENST00000330398 BIVM-ERCC5R4GMW8 1640 aa31.69■■■□□ 2.66
ATP6V0C-201ENST00000330398 DNAJC5Q9H3Z4 198 aa31.68■■■□□ 2.66
ATP6V0C-201ENST00000330398 SYNJ1O43426 1573 aa31.66■■■□□ 2.66
ATP6V0C-201ENST00000330398 AQRO60306 1485 aaKnown RBP eCLIP31.64■■■□□ 2.665e-8■■■■□ 20.2
ATP6V0C-201ENST00000330398 EIF4G3O43432 1585 aaKnown RBP31.64■■■□□ 2.65
ATP6V0C-201ENST00000330398 WDR97A6NE52 1622 aa31.62■■■□□ 2.65
ATP6V0C-201ENST00000330398 TDRD9Q8NDG6 1382 aaKnown RBP31.58■■■□□ 2.65
ATP6V0C-201ENST00000330398 ABCA10Q8WWZ4 1543 aa31.57■■■□□ 2.64
ATP6V0C-201ENST00000330398 GRIN2BQ13224 1484 aa31.42■■■□□ 2.62
ATP6V0C-201ENST00000330398 GAPVD1Q14C86 1478 aa31.42■■■□□ 2.62
ATP6V0C-201ENST00000330398 OSCARQ8IYS5 282 aa31.4■■■□□ 2.62
ATP6V0C-201ENST00000330398 ABCA5Q8WWZ7 1642 aa31.39■■■□□ 2.62
ATP6V0C-201ENST00000330398 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
ATP6V0C-201ENST00000330398 SNAPC4Q5SXM2 1469 aa31.31■■■□□ 2.6
ATP6V0C-201ENST00000330398 PBRM1Q86U86 1689 aa31.28■■■□□ 2.6
ATP6V0C-201ENST00000330398 CHD1O14646 1710 aa31.21■■■□□ 2.59
ATP6V0C-201ENST00000330398 SYNJ2O15056 1496 aa31.21■■■□□ 2.59
ATP6V0C-201ENST00000330398 FBLN2P98095 1184 aa31.2■■■□□ 2.59
ATP6V0C-201ENST00000330398 ERICH3Q5RHP9 1530 aa31.19■■■□□ 2.58
ATP6V0C-201ENST00000330398 CHMP7Q8WUX9 453 aaPredicted RBP31.18■■■□□ 2.58
ATP6V0C-201ENST00000330398 KIF27Q86VH2 1401 aa31.13■■■□□ 2.57
ATP6V0C-201ENST00000330398 FHAD1B1AJZ9 1412 aa31.08■■■□□ 2.57
ATP6V0C-201ENST00000330398 TRIM41Q8WV44 630 aa31.08■■■□□ 2.57
ATP6V0C-201ENST00000330398 ADAMTS12P58397 1594 aa31.07■■■□□ 2.56
ATP6V0C-201ENST00000330398 IGF1RP08069 1367 aa31.05■■■□□ 2.56
ATP6V0C-201ENST00000330398 GRIN2AQ12879 1464 aa31■■■□□ 2.55
ATP6V0C-201ENST00000330398 CLASP1Q7Z460 1538 aa30.94■■■□□ 2.54
ATP6V0C-201ENST00000330398 NUP160Q12769 1436 aa30.9■■■□□ 2.54
ATP6V0C-201ENST00000330398 CUL7Q14999 1698 aa30.87■■■□□ 2.53
ATP6V0C-201ENST00000330398 ARHGEF11O15085 1522 aa30.83■■■□□ 2.53
ATP6V0C-201ENST00000330398 RUSC2Q8N2Y8 1516 aa30.83■■■□□ 2.53
ATP6V0C-201ENST00000330398 CARMIL1Q5VZK9 1371 aa30.82■■■□□ 2.52
ATP6V0C-201ENST00000330398 CEP170Q5SW79 1584 aa30.81■■■□□ 2.52
ATP6V0C-201ENST00000330398 RIMBP3CA6NJZ7 1639 aa30.8■■■□□ 2.52
ATP6V0C-201ENST00000330398 RIMBP3BA6NNM3 1639 aa30.8■■■□□ 2.52
ATP6V0C-201ENST00000330398 RIMBP3Q9UFD9 1639 aa30.8■■■□□ 2.52
ATP6V0C-201ENST00000330398 CHIC1Q5VXU3 224 aa30.77■■■□□ 2.52
ATP6V0C-201ENST00000330398 RAPGEF2Q9Y4G8 1499 aa30.63■■■□□ 2.49
ATP6V0C-201ENST00000330398 SHROOM2Q13796 1616 aa30.63■■■□□ 2.49
ATP6V0C-201ENST00000330398 KIAA0586Q9BVV6 1533 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms