RNA–Protein interactions for RNA: ENST00000322269.10

FAM3A-201, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5 BASIC

Gene FAM3A, Length 1,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-201ENST00000322269 CTTNBP2Q8WZ74 1663 aa29.27■■■□□ 2.28
FAM3A-201ENST00000322269 CHMP7Q8WUX9 453 aaPredicted RBP29.27■■■□□ 2.28
FAM3A-201ENST00000322269 CLIP1P30622 1438 aa29.23■■■□□ 2.27
FAM3A-201ENST00000322269 FBLN2P98095 1184 aa29.21■■■□□ 2.27
FAM3A-201ENST00000322269 RANGAP1P46060 587 aaPredicted RBP29.2■■■□□ 2.27
FAM3A-201ENST00000322269 CHD1O14646 1710 aa29.1■■■□□ 2.25
FAM3A-201ENST00000322269 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
FAM3A-201ENST00000322269 NUP160Q12769 1436 aa29.08■■■□□ 2.25
FAM3A-201ENST00000322269 IQGAP2Q13576 1575 aa29.08■■■□□ 2.25
FAM3A-201ENST00000322269 KIAA0586Q9BVV6 1533 aa29.07■■■□□ 2.24
FAM3A-201ENST00000322269 ARHGAP35Q9NRY4 1499 aa29.06■■■□□ 2.24
FAM3A-201ENST00000322269 EFCAB5A4FU69 1503 aa28.99■■■□□ 2.23
FAM3A-201ENST00000322269 ARAP1Q96P48 1450 aa28.99■■■□□ 2.23
FAM3A-201ENST00000322269 SAMD9Q5K651 1589 aa28.94■■■□□ 2.22
FAM3A-201ENST00000322269 UGGT2Q9NYU1 1516 aa28.93■■■□□ 2.22
FAM3A-201ENST00000322269 PPARGC1BQ86YN6 1023 aaKnown RBP28.92■■■□□ 2.22
FAM3A-201ENST00000322269 VPS8Q8N3P4 1428 aa28.92■■■□□ 2.22
FAM3A-201ENST00000322269 P3H3Q8IVL6 736 aa28.9■■■□□ 2.22
FAM3A-201ENST00000322269 FHOD3Q2V2M9 1422 aa28.85■■■□□ 2.21
FAM3A-201ENST00000322269 JPH4Q96JJ6 628 aa28.84■■■□□ 2.21
FAM3A-201ENST00000322269 ZEB1P37275 1124 aaPredicted RBP28.81■■■□□ 2.2
FAM3A-201ENST00000322269 OSCARQ8IYS5 282 aa28.8■■■□□ 2.2
FAM3A-201ENST00000322269 DISP1Q96F81 1524 aa28.8■■■□□ 2.2
FAM3A-201ENST00000322269 KIAA0556O60303 1618 aa28.78■■■□□ 2.2
FAM3A-201ENST00000322269 CLASP1Q7Z460 1538 aa28.77■■■□□ 2.2
FAM3A-201ENST00000322269 FMN1Q68DA7 1419 aa28.74■■■□□ 2.19
FAM3A-201ENST00000322269 CARMIL2Q6F5E8 1435 aa28.73■■■□□ 2.19
FAM3A-201ENST00000322269 SHROOM2Q13796 1616 aa28.73■■■□□ 2.19
FAM3A-201ENST00000322269 PRG4Q92954 1404 aaPredicted RBP28.68■■■□□ 2.18
FAM3A-201ENST00000322269 PCF11O94913 1555 aaKnown RBP28.65■■■□□ 2.18
FAM3A-201ENST00000322269 APLP2Q06481 763 aa28.64■■■□□ 2.17
FAM3A-201ENST00000322269 CASKIN1Q8WXD9 1431 aa28.63■■■□□ 2.17
FAM3A-201ENST00000322269 FYCO1Q9BQS8 1478 aa28.61■■■□□ 2.17
FAM3A-201ENST00000322269 TTBK1Q5TCY1 1321 aaPredicted RBP28.56■■■□□ 2.16
FAM3A-201ENST00000322269 ATP1B4Q9UN42 357 aaPredicted RBP28.55■■■□□ 2.16
FAM3A-201ENST00000322269 ERCC6L2Q5T890 1561 aa28.53■■■□□ 2.16
FAM3A-201ENST00000322269 MAP3K1Q13233 1512 aa28.5■■■□□ 2.15
FAM3A-201ENST00000322269 TIAM1Q13009 1591 aa28.48■■■□□ 2.15
FAM3A-201ENST00000322269 PTPRGP23470 1445 aa28.47■■■□□ 2.15
FAM3A-201ENST00000322269 HECW1Q76N89 1606 aa28.47■■■□□ 2.15
FAM3A-201ENST00000322269 RAPGEF6Q8TEU7 1601 aa28.47■■■□□ 2.15
FAM3A-201ENST00000322269 CFAP43Q8NDM7 1665 aa28.44■■■□□ 2.14
FAM3A-201ENST00000322269 LRRIQ1Q96JM4 1722 aa28.44■■■□□ 2.14
FAM3A-201ENST00000322269 PLB1Q6P1J6 1458 aa28.43■■■□□ 2.14
FAM3A-201ENST00000322269 KANK4Q5T7N3 995 aaPredicted RBP28.41■■■□□ 2.14
FAM3A-201ENST00000322269 ABCA8O94911 1581 aa28.39■■■□□ 2.14
FAM3A-201ENST00000322269 CCDC18Q5T9S5 1454 aa28.39■■■□□ 2.14
FAM3A-201ENST00000322269 NUP153P49790 1475 aaKnown RBP28.38■■■□□ 2.13
FAM3A-201ENST00000322269 EPRSP07814 1512 aaKnown RBP28.37■■■□□ 2.13
FAM3A-201ENST00000322269 LRRC9Q6ZRR7 1453 aa28.35■■■□□ 2.13
FAM3A-201ENST00000322269 ARHGEF11O15085 1522 aa28.34■■■□□ 2.13
FAM3A-201ENST00000322269 DNAJC5Q9H3Z4 198 aa28.34■■■□□ 2.13
FAM3A-201ENST00000322269 UACAQ9BZF9 1416 aa28.3■■■□□ 2.12
FAM3A-201ENST00000322269 RIMBP3CA6NJZ7 1639 aa28.3■■■□□ 2.12
FAM3A-201ENST00000322269 RIMBP3BA6NNM3 1639 aa28.3■■■□□ 2.12
FAM3A-201ENST00000322269 RIMBP3Q9UFD9 1639 aa28.3■■■□□ 2.12
FAM3A-201ENST00000322269 CDK13Q14004 1512 aaKnown RBP28.3■■■□□ 2.12
FAM3A-201ENST00000322269 ARID3CA6NKF2 412 aa28.28■■■□□ 2.12
FAM3A-201ENST00000322269 MTUS2Q5JR59 1369 aa28.23■■■□□ 2.11
FAM3A-201ENST00000322269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.23■■■□□ 2.11
FAM3A-201ENST00000322269 ABCC2Q92887 1545 aa28.23■■■□□ 2.11
FAM3A-201ENST00000322269 HNRNPUL2Q1KMD3 747 aaKnown RBP28.21■■■□□ 2.11
FAM3A-201ENST00000322269 CCER1Q8TC90 406 aaPredicted RBP28.2■■■□□ 2.11
FAM3A-201ENST00000322269 MAGI3Q5TCQ9 1506 aa28.19■■■□□ 2.1
FAM3A-201ENST00000322269 EHBP1L1Q8N3D4 1523 aa28.19■■■□□ 2.1
FAM3A-201ENST00000322269 UHRF1BP1LA0JNW5 1464 aa28.19■■■□□ 2.1
FAM3A-201ENST00000322269 ATP10BO94823 1461 aa28.19■■■□□ 2.1
FAM3A-201ENST00000322269 CDK11AQ9UQ88 783 aaPredicted RBP28.17■■■□□ 2.1
FAM3A-201ENST00000322269 SUPT6HQ7KZ85 1726 aaKnown RBP28.11■■■□□ 2.09
FAM3A-201ENST00000322269 CYB5RLQ6IPT4 315 aa28.1■■■□□ 2.09
FAM3A-201ENST00000322269 ADCY10Q96PN6 1610 aa28.09■■■□□ 2.09
FAM3A-201ENST00000322269 KDM5BQ9UGL1 1544 aa28.07■■■□□ 2.08
FAM3A-201ENST00000322269 TROQ12816 1431 aaPredicted RBP28.07■■■□□ 2.08
FAM3A-201ENST00000322269 NCOA2Q15596 1464 aa28.06■■■□□ 2.08
FAM3A-201ENST00000322269 PLEKHD1A6NEE1 506 aa28.06■■■□□ 2.08
FAM3A-201ENST00000322269 PHLDB1Q86UU1 1377 aa28.05■■■□□ 2.08
FAM3A-201ENST00000322269 ZCCHC11Q5TAX3 1644 aaKnown RBP28.04■■■□□ 2.08
FAM3A-201ENST00000322269 RRBP1Q9P2E9 1410 aaKnown RBP28■■■□□ 2.07
FAM3A-201ENST00000322269 KIF14Q15058 1648 aa27.94■■■□□ 2.06
FAM3A-201ENST00000322269 CCNB3Q8WWL7 1395 aa27.93■■■□□ 2.06
FAM3A-201ENST00000322269 MYOM3Q5VTT5 1437 aa27.93■■■□□ 2.06
FAM3A-201ENST00000322269 FGD6Q6ZV73 1430 aa27.89■■■□□ 2.06
FAM3A-201ENST00000322269 NPM1P06748 294 aaKnown RBP eCLIP27.89■■■□□ 2.06
FAM3A-201ENST00000322269 ABCC10Q5T3U5 1492 aa27.84■■■□□ 2.05
FAM3A-201ENST00000322269 MIA2Q96PC5 1412 aa27.82■■■□□ 2.04
FAM3A-201ENST00000322269 WDR7Q9Y4E6 1490 aa27.82■■■□□ 2.04
FAM3A-201ENST00000322269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.8■■■□□ 2.04
FAM3A-201ENST00000322269 FAM50AQ14320 339 aaKnown RBP27.8■■■□□ 2.04
FAM3A-201ENST00000322269 ITSN2Q9NZM3 1697 aa27.8■■■□□ 2.04
FAM3A-201ENST00000322269 ASXL2Q76L83 1435 aa27.79■■■□□ 2.04
FAM3A-201ENST00000322269 KCNH8Q96L42 1107 aa27.79■■■□□ 2.04
FAM3A-201ENST00000322269 GPATCH8Q9UKJ3 1502 aaKnown RBP27.79■■■□□ 2.04
FAM3A-201ENST00000322269 PTPN23Q9H3S7 1636 aa27.78■■■□□ 2.04
FAM3A-201ENST00000322269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.77■■■□□ 2.04
FAM3A-201ENST00000322269 CDC42BPAQ5VT25 1732 aa27.76■■■□□ 2.03
FAM3A-201ENST00000322269 TCOF1Q13428 1488 aaKnown RBP27.74■■■□□ 2.03
FAM3A-201ENST00000322269 TTC37Q6PGP7 1564 aa27.74■■■□□ 2.03
FAM3A-201ENST00000322269 CFDP1Q9UEE9 299 aaPredicted RBP27.72■■■□□ 2.03
FAM3A-201ENST00000322269 MAPKBP1O60336 1514 aa27.68■■■□□ 2.02
FAM3A-201ENST00000322269 ITGAEP38570 1179 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms