RNA–Protein interactions for RNA: ENST00000317376.8

SPOCK2-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPOCK2, Length 5,328 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-201ENST00000317376 FKBP8Q14318 412 aa18.46■□□□□ 0.55
SPOCK2-201ENST00000317376 VPS8Q8N3P4 1428 aa18.45■□□□□ 0.54
SPOCK2-201ENST00000317376 ZBTB47Q9UFB7 747 aaPredicted RBP18.44■□□□□ 0.54
SPOCK2-201ENST00000317376 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
SPOCK2-201ENST00000317376 CANXP27824 592 aaKnown RBP18.41■□□□□ 0.54
SPOCK2-201ENST00000317376 SENP3Q9H4L4 574 aaPredicted RBP18.4■□□□□ 0.54
SPOCK2-201ENST00000317376 HNRNPUQ00839 825 aaKnown RBP eCLIP18.4■□□□□ 0.54
SPOCK2-201ENST00000317376 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
SPOCK2-201ENST00000317376 KCNH8Q96L42 1107 aa18.36■□□□□ 0.53
SPOCK2-201ENST00000317376 FHAD1B1AJZ9 1412 aa18.36■□□□□ 0.53
SPOCK2-201ENST00000317376 NEFMP07197 916 aa18.35■□□□□ 0.53
SPOCK2-201ENST00000317376 CCNB3Q8WWL7 1395 aa18.35■□□□□ 0.53
SPOCK2-201ENST00000317376 CUX2O14529 1486 aa18.32■□□□□ 0.52
SPOCK2-201ENST00000317376 CARMIL1Q5VZK9 1371 aa18.31■□□□□ 0.52
SPOCK2-201ENST00000317376 FAM9BQ8IZU0 186 aa18.29■□□□□ 0.52
SPOCK2-201ENST00000317376 EIF4G2P78344 907 aaKnown RBP eCLIP18.28■□□□□ 0.52
SPOCK2-201ENST00000317376 PPP1R15AO75807 674 aaPredicted RBP18.28■□□□□ 0.52
SPOCK2-201ENST00000317376 RRP7BPQ9NSQ0 103 aa18.28■□□□□ 0.52
SPOCK2-201ENST00000317376 PLEKHG5O94827 1062 aa18.25■□□□□ 0.51
SPOCK2-201ENST00000317376 TSPY4P0CV99 314 aa18.25■□□□□ 0.51
SPOCK2-201ENST00000317376 TSPY10P0CW01 314 aa18.25■□□□□ 0.51
SPOCK2-201ENST00000317376 ANP32AP39687 249 aaKnown RBP18.25■□□□□ 0.51
SPOCK2-201ENST00000317376 HIRIP3Q9BW71 556 aaPredicted RBP18.23■□□□□ 0.51
SPOCK2-201ENST00000317376 NPM2Q86SE8 214 aaKnown RBP18.22■□□□□ 0.51
SPOCK2-201ENST00000317376 MRS2Q9HD23 443 aa18.22■□□□□ 0.51
SPOCK2-201ENST00000317376 TIMELESSQ9UNS1 1208 aa18.2■□□□□ 0.5
SPOCK2-201ENST00000317376 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
SPOCK2-201ENST00000317376 TMC1Q8TDI8 760 aa18.18■□□□□ 0.5
SPOCK2-201ENST00000317376 SETD5Q9C0A6 1442 aa18.17■□□□□ 0.5
SPOCK2-201ENST00000317376 KANK4Q5T7N3 995 aaPredicted RBP18.15■□□□□ 0.5
SPOCK2-201ENST00000317376 SIN3AQ96ST3 1273 aa18.15■□□□□ 0.5
SPOCK2-201ENST00000317376 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.5
SPOCK2-201ENST00000317376 ARHGAP35Q9NRY4 1499 aa18.15■□□□□ 0.5
SPOCK2-201ENST00000317376 SALL2Q9Y467 1007 aaPredicted RBP18.14■□□□□ 0.49
SPOCK2-201ENST00000317376 RAPGEF2Q9Y4G8 1499 aa18.13■□□□□ 0.49
SPOCK2-201ENST00000317376 PLEKHD1A6NEE1 506 aa18.11■□□□□ 0.49
SPOCK2-201ENST00000317376 MLECQ14165 292 aa18.11■□□□□ 0.49
SPOCK2-201ENST00000317376 KDM2AQ9Y2K7 1162 aa18.1■□□□□ 0.49
SPOCK2-201ENST00000317376 RUSC2Q8N2Y8 1516 aa18.09■□□□□ 0.49
SPOCK2-201ENST00000317376 ZBTB7CA1YPR0 619 aa18.08■□□□□ 0.49
SPOCK2-201ENST00000317376 CFDP1Q9UEE9 299 aaPredicted RBP18.08■□□□□ 0.48
SPOCK2-201ENST00000317376 DCAF8L1A6NGE4 600 aa18.08■□□□□ 0.48
SPOCK2-201ENST00000317376 CCDC136Q96JN2 1154 aa18.07■□□□□ 0.48
SPOCK2-201ENST00000317376 CYB5RLQ6IPT4 315 aa18.06■□□□□ 0.48
SPOCK2-201ENST00000317376 EIF4G1Q04637 1599 aaKnown RBP18.06■□□□□ 0.48
SPOCK2-201ENST00000317376 PHF23Q9BUL5 403 aaPredicted RBP18.06■□□□□ 0.48
SPOCK2-201ENST00000317376 FMN1Q68DA7 1419 aa18.04■□□□□ 0.48
SPOCK2-201ENST00000317376 RAB3GAP2Q9H2M9 1393 aa18.04■□□□□ 0.48
SPOCK2-201ENST00000317376 CADPSQ9ULU8 1353 aa18.02■□□□□ 0.48
SPOCK2-201ENST00000317376 OSCARQ8IYS5 282 aa18.01■□□□□ 0.47
SPOCK2-201ENST00000317376 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
SPOCK2-201ENST00000317376 WDR43Q15061 677 aaKnown RBP eCLIP18■□□□□ 0.47
SPOCK2-201ENST00000317376 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.99■□□□□ 0.47
SPOCK2-201ENST00000317376 CCER2I3L3R5 266 aa17.99■□□□□ 0.47
SPOCK2-201ENST00000317376 IRX6P78412 446 aaPredicted RBP17.99■□□□□ 0.47
SPOCK2-201ENST00000317376 SUPT16HQ9Y5B9 1047 aaKnown RBP17.97■□□□□ 0.47
SPOCK2-201ENST00000317376 PDS5BQ9NTI5 1447 aa17.97■□□□□ 0.47
SPOCK2-201ENST00000317376 HSP90AA1P07900 732 aaKnown RBP17.93■□□□□ 0.46
SPOCK2-201ENST00000317376 CARD11Q9BXL7 1154 aa17.92■□□□□ 0.46
SPOCK2-201ENST00000317376 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
SPOCK2-201ENST00000317376 KIF21BO75037 1637 aa17.89■□□□□ 0.45
SPOCK2-201ENST00000317376 FHOD3Q2V2M9 1422 aa17.88■□□□□ 0.45
SPOCK2-201ENST00000317376 UPF2Q9HAU5 1272 aaKnown RBP17.88■□□□□ 0.45
SPOCK2-201ENST00000317376 TDRD9Q8NDG6 1382 aaKnown RBP17.86■□□□□ 0.45
SPOCK2-201ENST00000317376 CDCA8Q53HL2 280 aa17.85■□□□□ 0.45
SPOCK2-201ENST00000317376 RGL3Q3MIN7 710 aa17.85■□□□□ 0.45
SPOCK2-201ENST00000317376 NPHP1O15259 732 aa17.84■□□□□ 0.45
SPOCK2-201ENST00000317376 PPP4R2Q9NY27 417 aa17.84■□□□□ 0.45
SPOCK2-201ENST00000317376 HSPA5P11021 654 aaKnown RBP17.84■□□□□ 0.45
SPOCK2-201ENST00000317376 FOXD1Q16676 465 aa17.84■□□□□ 0.45
SPOCK2-201ENST00000317376 HDGFP51858 240 aaKnown RBP17.81■□□□□ 0.44
SPOCK2-201ENST00000317376 CCDC9Q9Y3X0 531 aaKnown RBP17.81■□□□□ 0.44
SPOCK2-201ENST00000317376 FANCD2Q9BXW9 1451 aa17.8■□□□□ 0.44
SPOCK2-201ENST00000317376 CARMIL2Q6F5E8 1435 aa17.78■□□□□ 0.44
SPOCK2-201ENST00000317376 NCAPD3P42695 1498 aa17.78■□□□□ 0.44
SPOCK2-201ENST00000317376 MPHOSPH9Q99550 1183 aa17.78■□□□□ 0.44
SPOCK2-201ENST00000317376 ANP32EQ9BTT0 268 aa17.78■□□□□ 0.44
SPOCK2-201ENST00000317376 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.44
SPOCK2-201ENST00000317376 KNSTRNQ9Y448 316 aa17.77■□□□□ 0.44
SPOCK2-201ENST00000317376 ANP32BQ92688 251 aaKnown RBP17.76■□□□□ 0.43
SPOCK2-201ENST00000317376 SYNJ1O43426 1573 aa17.75■□□□□ 0.43
SPOCK2-201ENST00000317376 ARXQ96QS3 562 aa17.74■□□□□ 0.43
SPOCK2-201ENST00000317376 IGF1RP08069 1367 aa17.74■□□□□ 0.43
SPOCK2-201ENST00000317376 FGD5Q6ZNL6 1462 aa17.74■□□□□ 0.43
SPOCK2-201ENST00000317376 MEX3CQ5U5Q3 659 aaKnown RBP17.74■□□□□ 0.43
SPOCK2-201ENST00000317376 NBR1Q14596 966 aa17.73■□□□□ 0.43
SPOCK2-201ENST00000317376 CCDC18Q5T9S5 1454 aa17.73■□□□□ 0.43
SPOCK2-201ENST00000317376 SENP3-EIF4A1A0A087X0R7 540 aa17.73■□□□□ 0.43
SPOCK2-201ENST00000317376 DDRGK1Q96HY6 314 aa17.72■□□□□ 0.43
SPOCK2-201ENST00000317376 DCAF11Q8TEB1 546 aa17.71■□□□□ 0.43
SPOCK2-201ENST00000317376 PKD2Q13563 968 aa17.7■□□□□ 0.42
SPOCK2-201ENST00000317376 ANKRD30AQ9BXX3 1397 aa17.7■□□□□ 0.42
SPOCK2-201ENST00000317376 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
SPOCK2-201ENST00000317376 TMF1P82094 1093 aa17.67■□□□□ 0.42
SPOCK2-201ENST00000317376 EIF5BO60841 1220 aaKnown RBP17.66■□□□□ 0.42
SPOCK2-201ENST00000317376 CFAP53Q96M91 514 aa17.66■□□□□ 0.42
SPOCK2-201ENST00000317376 TOP2BQ02880 1626 aa17.66■□□□□ 0.42
SPOCK2-201ENST00000317376 KANK1Q14678 1352 aa17.62■□□□□ 0.41
SPOCK2-201ENST00000317376 LRRC9Q6ZRR7 1453 aa17.62■□□□□ 0.41
SPOCK2-201ENST00000317376 L3MBTL2Q969R5 705 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms