RNA–Protein interactions for RNA: ENST00000317376.8

SPOCK2-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPOCK2, Length 5,328 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-201ENST00000317376 NISCHQ9Y2I1 1504 aa24.28■■□□□ 1.48
SPOCK2-201ENST00000317376 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.42
SPOCK2-201ENST00000317376 SUPT5HO00267 1087 aaKnown RBP22.49■■□□□ 1.19
SPOCK2-201ENST00000317376 SHROOM4Q9ULL8 1493 aa22.35■■□□□ 1.17
SPOCK2-201ENST00000317376 FAM9AQ8IZU1 332 aaPredicted RBP21.62■■□□□ 1.05
SPOCK2-201ENST00000317376 EHMT2Q96KQ7 1210 aa21.56■■□□□ 1.04
SPOCK2-201ENST00000317376 PCGF6Q9BYE7 350 aa21.1■□□□□ 0.97
SPOCK2-201ENST00000317376 APLP2Q06481 763 aa20.97■□□□□ 0.95
SPOCK2-201ENST00000317376 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
SPOCK2-201ENST00000317376 ZEB1P37275 1124 aaPredicted RBP20.83■□□□□ 0.93
SPOCK2-201ENST00000317376 TTBK1Q5TCY1 1321 aaPredicted RBP20.81■□□□□ 0.92
SPOCK2-201ENST00000317376 PELP1Q8IZL8 1130 aaKnown RBP20.69■□□□□ 0.9
SPOCK2-201ENST00000317376 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
SPOCK2-201ENST00000317376 RANGAP1P46060 587 aaPredicted RBP20.6■□□□□ 0.89
SPOCK2-201ENST00000317376 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.88
SPOCK2-201ENST00000317376 CCER1Q8TC90 406 aaPredicted RBP20.49■□□□□ 0.87
SPOCK2-201ENST00000317376 HRCP23327 699 aa20.48■□□□□ 0.87
SPOCK2-201ENST00000317376 MYT1LQ9UL68 1186 aa20.47■□□□□ 0.87
SPOCK2-201ENST00000317376 UBTFP17480 764 aaKnown RBP20.43■□□□□ 0.86
SPOCK2-201ENST00000317376 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
SPOCK2-201ENST00000317376 LOC105371045A0A1W2PR82 267 aa20.35■□□□□ 0.85
SPOCK2-201ENST00000317376 CENPBP07199 599 aaPredicted RBP20.35■□□□□ 0.85
SPOCK2-201ENST00000317376 ZCCHC6Q5VYS8 1495 aaKnown RBP20.29■□□□□ 0.84
SPOCK2-201ENST00000317376 CCDC180Q9P1Z9 1646 aa20.21■□□□□ 0.83
SPOCK2-201ENST00000317376 PPARGC1BQ86YN6 1023 aaKnown RBP20.15■□□□□ 0.82
SPOCK2-201ENST00000317376 ABCC9O60706 1549 aa20.11■□□□□ 0.81
SPOCK2-201ENST00000317376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.09■□□□□ 0.81
SPOCK2-201ENST00000317376 HNRNPUL2Q1KMD3 747 aaKnown RBP20.09■□□□□ 0.81
SPOCK2-201ENST00000317376 PABPN1Q86U42 306 aaKnown RBP eCLIP20.04■□□□□ 0.8
SPOCK2-201ENST00000317376 ERICH6Q7L0X2 663 aa19.89■□□□□ 0.77
SPOCK2-201ENST00000317376 FBLN2P98095 1184 aa19.87■□□□□ 0.77
SPOCK2-201ENST00000317376 YTHDC1Q96MU7 727 aaKnown RBP19.86■□□□□ 0.77
SPOCK2-201ENST00000317376 SCRIBQ14160 1630 aa19.78■□□□□ 0.76
SPOCK2-201ENST00000317376 NEFLP07196 543 aa19.73■□□□□ 0.75
SPOCK2-201ENST00000317376 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
SPOCK2-201ENST00000317376 ITGAEP38570 1179 aa19.7■□□□□ 0.74
SPOCK2-201ENST00000317376 DIEXFQ68CQ4 756 aaKnown RBP19.57■□□□□ 0.72
SPOCK2-201ENST00000317376 NPM1P06748 294 aaKnown RBP eCLIP19.53■□□□□ 0.72
SPOCK2-201ENST00000317376 MYT1Q01538 1121 aa19.52■□□□□ 0.72
SPOCK2-201ENST00000317376 POLR3GLQ9BT43 218 aa19.51■□□□□ 0.71
SPOCK2-201ENST00000317376 ESF1Q9H501 851 aaKnown RBP19.47■□□□□ 0.71
SPOCK2-201ENST00000317376 CSRNP3Q8WYN3 585 aa19.47■□□□□ 0.71
SPOCK2-201ENST00000317376 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
SPOCK2-201ENST00000317376 PLPPR3Q6T4P5 718 aa19.42■□□□□ 0.7
SPOCK2-201ENST00000317376 CNGB1Q14028 1251 aaPredicted RBP19.39■□□□□ 0.69
SPOCK2-201ENST00000317376 RSF1Q96T23 1441 aaPredicted RBP19.37■□□□□ 0.69
SPOCK2-201ENST00000317376 TRHP20396 242 aaPredicted RBP19.34■□□□□ 0.69
SPOCK2-201ENST00000317376 BCANQ96GW7 911 aa19.31■□□□□ 0.68
SPOCK2-201ENST00000317376 NACADO15069 1562 aa19.3■□□□□ 0.68
SPOCK2-201ENST00000317376 RB1CC1Q8TDY2 1594 aa19.29■□□□□ 0.68
SPOCK2-201ENST00000317376 FAM50AQ14320 339 aaKnown RBP19.28■□□□□ 0.68
SPOCK2-201ENST00000317376 ZNF316A6NFI3 1004 aaPredicted RBP19.27■□□□□ 0.68
SPOCK2-201ENST00000317376 AEBP2Q6ZN18 517 aaPredicted RBP19.26■□□□□ 0.67
SPOCK2-201ENST00000317376 DAXXQ9UER7 740 aaPredicted RBP19.13■□□□□ 0.65
SPOCK2-201ENST00000317376 SLC4A1APQ9BWU0 796 aaKnown RBP19.11■□□□□ 0.65
SPOCK2-201ENST00000317376 GTF3C3Q9Y5Q9 886 aa19.11■□□□□ 0.65
SPOCK2-201ENST00000317376 EEA1Q15075 1411 aa19.09■□□□□ 0.65
SPOCK2-201ENST00000317376 NEUROD1Q13562 356 aa19.09■□□□□ 0.65
SPOCK2-201ENST00000317376 ACIN1Q9UKV3 1341 aaKnown RBP19.08■□□□□ 0.64
SPOCK2-201ENST00000317376 TRIM52Q96A61 297 aa19.04■□□□□ 0.64
SPOCK2-201ENST00000317376 BAZ1AQ9NRL2 1556 aaPredicted RBP19■□□□□ 0.63
SPOCK2-201ENST00000317376 GOLGA3Q08378 1498 aa18.98■□□□□ 0.63
SPOCK2-201ENST00000317376 ANP32CO43423 234 aa18.96■□□□□ 0.63
SPOCK2-201ENST00000317376 CEP162Q5TB80 1403 aa18.95■□□□□ 0.62
SPOCK2-201ENST00000317376 CLIP1P30622 1438 aa18.94■□□□□ 0.62
SPOCK2-201ENST00000317376 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
SPOCK2-201ENST00000317376 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
SPOCK2-201ENST00000317376 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.62
SPOCK2-201ENST00000317376 TNIKQ9UKE5 1360 aa18.89■□□□□ 0.61
SPOCK2-201ENST00000317376 STAG3Q9UJ98 1225 aa18.88■□□□□ 0.61
SPOCK2-201ENST00000317376 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
SPOCK2-201ENST00000317376 CLSPNQ9HAW4 1339 aa18.84■□□□□ 0.61
SPOCK2-201ENST00000317376 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.6
SPOCK2-201ENST00000317376 CEP164Q9UPV0 1460 aa18.81■□□□□ 0.6
SPOCK2-201ENST00000317376 ARID4BQ4LE39 1312 aaPredicted RBP18.79■□□□□ 0.6
SPOCK2-201ENST00000317376 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
SPOCK2-201ENST00000317376 MROH2BQ7Z745 1585 aa18.78■□□□□ 0.6
SPOCK2-201ENST00000317376 ERCC6Q03468 1493 aa18.76■□□□□ 0.59
SPOCK2-201ENST00000317376 ARID3CA6NKF2 412 aa18.73■□□□□ 0.59
SPOCK2-201ENST00000317376 TONSLQ96HA7 1378 aa18.71■□□□□ 0.58
SPOCK2-201ENST00000317376 CDK11AQ9UQ88 783 aaPredicted RBP18.7■□□□□ 0.58
SPOCK2-201ENST00000317376 KIF27Q86VH2 1401 aa18.65■□□□□ 0.58
SPOCK2-201ENST00000317376 RTL5Q5HYW3 569 aaPredicted RBP18.64■□□□□ 0.57
SPOCK2-201ENST00000317376 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
SPOCK2-201ENST00000317376 CCDC88BA6NC98 1476 aa18.64■□□□□ 0.57
SPOCK2-201ENST00000317376 SOGA1O94964 1423 aa18.6■□□□□ 0.57
SPOCK2-201ENST00000317376 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
SPOCK2-201ENST00000317376 SLC24A1O60721 1099 aa18.58■□□□□ 0.56
SPOCK2-201ENST00000317376 C14orf37Q86TY3 774 aa18.58■□□□□ 0.56
SPOCK2-201ENST00000317376 WIZO95785 1651 aa18.57■□□□□ 0.56
SPOCK2-201ENST00000317376 MTUS2Q5JR59 1369 aa18.57■□□□□ 0.56
SPOCK2-201ENST00000317376 MIER1Q8N108 512 aa18.57■□□□□ 0.56
SPOCK2-201ENST00000317376 A0A0G2JS52 829 aa18.56■□□□□ 0.56
SPOCK2-201ENST00000317376 ZNF777Q9ULD5 760 aaPredicted RBP18.55■□□□□ 0.56
SPOCK2-201ENST00000317376 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
SPOCK2-201ENST00000317376 DDX10Q13206 875 aaKnown RBP18.54■□□□□ 0.56
SPOCK2-201ENST00000317376 CHGAP10645 457 aaKnown RBP18.51■□□□□ 0.55
SPOCK2-201ENST00000317376 SMARCA2P51531 1590 aa18.48■□□□□ 0.55
SPOCK2-201ENST00000317376 BCL11AQ9H165 835 aa18.48■□□□□ 0.55
SPOCK2-201ENST00000317376 HAP1P54257 671 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms