RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 ABCA5Q8WWZ7 1642 aa29.21■■■□□ 2.27
AP3S1-201ENST00000316788 GAPVD1Q14C86 1478 aa29.19■■■□□ 2.26
AP3S1-201ENST00000316788 RRBP1Q9P2E9 1410 aaKnown RBP29.18■■■□□ 2.26
AP3S1-201ENST00000316788 CLSPNQ9HAW4 1339 aa29.18■■■□□ 2.26
AP3S1-201ENST00000316788 ZNF316A6NFI3 1004 aaPredicted RBP29.16■■■□□ 2.26
AP3S1-201ENST00000316788 MAP3K1Q13233 1512 aa29.15■■■□□ 2.26
AP3S1-201ENST00000316788 RANGAP1P46060 587 aaPredicted RBP29.13■■■□□ 2.25
AP3S1-201ENST00000316788 CARMIL1Q5VZK9 1371 aa29.09■■■□□ 2.25
AP3S1-201ENST00000316788 GRIN2BQ13224 1484 aa29.08■■■□□ 2.25
AP3S1-201ENST00000316788 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
AP3S1-201ENST00000316788 KANK4Q5T7N3 995 aaPredicted RBP29.04■■■□□ 2.24
AP3S1-201ENST00000316788 SNAPC4Q5SXM2 1469 aa29.03■■■□□ 2.24
AP3S1-201ENST00000316788 SCAF1Q9H7N4 1312 aaKnown RBP29■■■□□ 2.23
AP3S1-201ENST00000316788 TIAM1Q13009 1591 aa28.95■■■□□ 2.23
AP3S1-201ENST00000316788 DHX57Q6P158 1386 aaKnown RBP28.95■■■□□ 2.23
AP3S1-201ENST00000316788 ACIN1Q9UKV3 1341 aaKnown RBP28.95■■■□□ 2.22
AP3S1-201ENST00000316788 CCNB3Q8WWL7 1395 aa28.94■■■□□ 2.22
AP3S1-201ENST00000316788 FHAD1B1AJZ9 1412 aa28.91■■■□□ 2.22
AP3S1-201ENST00000316788 MAGI1Q96QZ7 1491 aaPredicted RBP28.91■■■□□ 2.22
AP3S1-201ENST00000316788 CENPBP07199 599 aaPredicted RBP28.89■■■□□ 2.22
AP3S1-201ENST00000316788 ADAMTS12P58397 1594 aa28.89■■■□□ 2.22
AP3S1-201ENST00000316788 FBLN2P98095 1184 aa28.89■■■□□ 2.21
AP3S1-201ENST00000316788 CUL7Q14999 1698 aa28.88■■■□□ 2.21
AP3S1-201ENST00000316788 EFCAB5A4FU69 1503 aa28.85■■■□□ 2.21
AP3S1-201ENST00000316788 SYNJ2O15056 1496 aa28.83■■■□□ 2.21
AP3S1-201ENST00000316788 CHMP7Q8WUX9 453 aaPredicted RBP28.82■■■□□ 2.2
AP3S1-201ENST00000316788 CFAP43Q8NDM7 1665 aa28.82■■■□□ 2.2
AP3S1-201ENST00000316788 LRRC9Q6ZRR7 1453 aa28.81■■■□□ 2.2
AP3S1-201ENST00000316788 CHD1O14646 1710 aa28.77■■■□□ 2.2
AP3S1-201ENST00000316788 NEUROD1Q13562 356 aa28.77■■■□□ 2.2
AP3S1-201ENST00000316788 GRIN2AQ12879 1464 aa28.74■■■□□ 2.19
AP3S1-201ENST00000316788 FYCO1Q9BQS8 1478 aa28.73■■■□□ 2.19
AP3S1-201ENST00000316788 PCF11O94913 1555 aaKnown RBP28.72■■■□□ 2.19
AP3S1-201ENST00000316788 CTTNBP2Q8WZ74 1663 aa28.69■■■□□ 2.18
AP3S1-201ENST00000316788 CASKIN1Q8WXD9 1431 aa28.67■■■□□ 2.18
AP3S1-201ENST00000316788 PELP1Q8IZL8 1130 aaKnown RBP28.63■■■□□ 2.17
AP3S1-201ENST00000316788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.62■■■□□ 2.17
AP3S1-201ENST00000316788 CEP170Q5SW79 1584 aa28.61■■■□□ 2.17
AP3S1-201ENST00000316788 PHLDB1Q86UU1 1377 aa28.6■■■□□ 2.17
AP3S1-201ENST00000316788 FMN1Q68DA7 1419 aa28.58■■■□□ 2.17
AP3S1-201ENST00000316788 OSCARQ8IYS5 282 aa28.57■■■□□ 2.16
AP3S1-201ENST00000316788 RAB3GAP2Q9H2M9 1393 aa28.57■■■□□ 2.16
AP3S1-201ENST00000316788 NUP160Q12769 1436 aa28.57■■■□□ 2.16
AP3S1-201ENST00000316788 FHOD3Q2V2M9 1422 aa28.57■■■□□ 2.16
AP3S1-201ENST00000316788 SETD5Q9C0A6 1442 aa28.56■■■□□ 2.16
AP3S1-201ENST00000316788 MIER1Q8N108 512 aa28.54■■■□□ 2.16
AP3S1-201ENST00000316788 SAMD9Q5K651 1589 aa28.52■■■□□ 2.16
AP3S1-201ENST00000316788 MAPKBP1O60336 1514 aa28.51■■■□□ 2.15
AP3S1-201ENST00000316788 CLASP1Q7Z460 1538 aa28.46■■■□□ 2.15
AP3S1-201ENST00000316788 GTF3C3Q9Y5Q9 886 aa28.44■■■□□ 2.14
AP3S1-201ENST00000316788 KIAA0586Q9BVV6 1533 aa28.42■■■□□ 2.14
AP3S1-201ENST00000316788 P3H3Q8IVL6 736 aa28.4■■■□□ 2.14
AP3S1-201ENST00000316788 ITGAEP38570 1179 aa28.39■■■□□ 2.14
AP3S1-201ENST00000316788 TIMELESSQ9UNS1 1208 aa28.35■■■□□ 2.13
AP3S1-201ENST00000316788 IQGAP2Q13576 1575 aa28.35■■■□□ 2.13
AP3S1-201ENST00000316788 FGD6Q6ZV73 1430 aa28.34■■■□□ 2.13
AP3S1-201ENST00000316788 JPH4Q96JJ6 628 aa28.33■■■□□ 2.13
AP3S1-201ENST00000316788 FAM50AQ14320 339 aaKnown RBP28.32■■■□□ 2.12
AP3S1-201ENST00000316788 EHBP1L1Q8N3D4 1523 aa28.27■■■□□ 2.12
AP3S1-201ENST00000316788 SHROOM2Q13796 1616 aa28.26■■■□□ 2.11
AP3S1-201ENST00000316788 ATP1B4Q9UN42 357 aaPredicted RBP28.26■■■□□ 2.11
AP3S1-201ENST00000316788 ERCC6L2Q5T890 1561 aa28.25■■■□□ 2.11
AP3S1-201ENST00000316788 MTUS2Q5JR59 1369 aa28.25■■■□□ 2.11
AP3S1-201ENST00000316788 PRG4Q92954 1404 aaPredicted RBP28.23■■■□□ 2.11
AP3S1-201ENST00000316788 CCDC18Q5T9S5 1454 aa28.23■■■□□ 2.11
AP3S1-201ENST00000316788 YTHDC1Q96MU7 727 aaKnown RBP28.22■■■□□ 2.11
AP3S1-201ENST00000316788 UGGT2Q9NYU1 1516 aa28.21■■■□□ 2.11
AP3S1-201ENST00000316788 LRRIQ1Q96JM4 1722 aa28.21■■■□□ 2.11
AP3S1-201ENST00000316788 ARHGEF11O15085 1522 aa28.2■■■□□ 2.1
AP3S1-201ENST00000316788 SUPT6HQ7KZ85 1726 aaKnown RBP28.2■■■□□ 2.1
AP3S1-201ENST00000316788 MYOM3Q5VTT5 1437 aa28.19■■■□□ 2.1
AP3S1-201ENST00000316788 NCOA2Q15596 1464 aa28.19■■■□□ 2.1
AP3S1-201ENST00000316788 HFM1A2PYH4 1435 aa28.19■■■□□ 2.1
AP3S1-201ENST00000316788 DISP1Q96F81 1524 aa28.18■■■□□ 2.1
AP3S1-201ENST00000316788 DNAJC5Q9H3Z4 198 aa28.13■■■□□ 2.09
AP3S1-201ENST00000316788 HECW1Q76N89 1606 aa28.13■■■□□ 2.09
AP3S1-201ENST00000316788 PTPN23Q9H3S7 1636 aa28.1■■■□□ 2.09
AP3S1-201ENST00000316788 KIAA0556O60303 1618 aa28.1■■■□□ 2.09
AP3S1-201ENST00000316788 UACAQ9BZF9 1416 aa28.09■■■□□ 2.09
AP3S1-201ENST00000316788 TCOF1Q13428 1488 aaKnown RBP28.08■■■□□ 2.09
AP3S1-201ENST00000316788 RIMBP3CA6NJZ7 1639 aa28.07■■■□□ 2.08
AP3S1-201ENST00000316788 RIMBP3BA6NNM3 1639 aa28.07■■■□□ 2.08
AP3S1-201ENST00000316788 RIMBP3Q9UFD9 1639 aa28.07■■■□□ 2.08
AP3S1-201ENST00000316788 CARMIL2Q6F5E8 1435 aa28.06■■■□□ 2.08
AP3S1-201ENST00000316788 PTPRKQ15262 1439 aa28.05■■■□□ 2.08
AP3S1-201ENST00000316788 NAIPQ13075 1403 aa28.03■■■□□ 2.08
AP3S1-201ENST00000316788 AKNAQ7Z591 1439 aa28.03■■■□□ 2.08
AP3S1-201ENST00000316788 SIN3AQ96ST3 1273 aa28.01■■■□□ 2.07
AP3S1-201ENST00000316788 MAGI3Q5TCQ9 1506 aa28.01■■■□□ 2.07
AP3S1-201ENST00000316788 PPP1R15AO75807 674 aaPredicted RBP27.98■■■□□ 2.07
AP3S1-201ENST00000316788 EPRSP07814 1512 aaKnown RBP27.98■■■□□ 2.07
AP3S1-201ENST00000316788 MIA2Q96PC5 1412 aa27.97■■■□□ 2.07
AP3S1-201ENST00000316788 PTPRGP23470 1445 aa27.93■■■□□ 2.06
AP3S1-201ENST00000316788 CYB5RLQ6IPT4 315 aa27.92■■■□□ 2.06
AP3S1-201ENST00000316788 GCC2Q8IWJ2 1684 aa27.92■■■□□ 2.06
AP3S1-201ENST00000316788 TONSLQ96HA7 1378 aa27.87■■■□□ 2.05
AP3S1-201ENST00000316788 PLB1Q6P1J6 1458 aa27.85■■■□□ 2.05
AP3S1-201ENST00000316788 CDK13Q14004 1512 aaKnown RBP27.8■■■□□ 2.04
AP3S1-201ENST00000316788 KDM5BQ9UGL1 1544 aa27.77■■■□□ 2.04
AP3S1-201ENST00000316788 ABCA8O94911 1581 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms