RNA–Protein interactions for RNA: ENST00000315965.6

CCDC71L-201, Transcript of coiled-coil domain containing 71 like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC71L, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71L-201ENST00000315965 NUP160Q12769 1436 aa38.61■■■■□ 3.77
CCDC71L-201ENST00000315965 CEP170Q5SW79 1584 aa38.59■■■■□ 3.77
CCDC71L-201ENST00000315965 CEP162Q5TB80 1403 aa38.57■■■■□ 3.76
CCDC71L-201ENST00000315965 KIAA0586Q9BVV6 1533 aa38.54■■■■□ 3.76
CCDC71L-201ENST00000315965 IQGAP2Q13576 1575 aa38.51■■■■□ 3.75
CCDC71L-201ENST00000315965 CLIP1P30622 1438 aa38.46■■■■□ 3.75
CCDC71L-201ENST00000315965 RANGAP1P46060 587 aaPredicted RBP38.46■■■■□ 3.75
CCDC71L-201ENST00000315965 UGGT2Q9NYU1 1516 aa38.31■■■■□ 3.72
CCDC71L-201ENST00000315965 EFCAB5A4FU69 1503 aa38.31■■■■□ 3.72
CCDC71L-201ENST00000315965 CLASP1Q7Z460 1538 aa38.29■■■■□ 3.72
CCDC71L-201ENST00000315965 ARHGAP35Q9NRY4 1499 aa38.29■■■■□ 3.72
CCDC71L-201ENST00000315965 OSCARQ8IYS5 282 aa38.28■■■■□ 3.72
CCDC71L-201ENST00000315965 JPH4Q96JJ6 628 aa38.26■■■■□ 3.72
CCDC71L-201ENST00000315965 SAMD9Q5K651 1589 aa38.25■■■■□ 3.71
CCDC71L-201ENST00000315965 SHROOM2Q13796 1616 aa38.17■■■■□ 3.7
CCDC71L-201ENST00000315965 ARAP1Q96P48 1450 aa38.16■■■■□ 3.7
CCDC71L-201ENST00000315965 DISP1Q96F81 1524 aa38.13■■■■□ 3.69
CCDC71L-201ENST00000315965 P3H3Q8IVL6 736 aa38.13■■■■□ 3.69
CCDC71L-201ENST00000315965 KIAA0556O60303 1618 aa38.12■■■■□ 3.69
CCDC71L-201ENST00000315965 CARMIL2Q6F5E8 1435 aa38.11■■■■□ 3.69
CCDC71L-201ENST00000315965 FHOD3Q2V2M9 1422 aa38.09■■■■□ 3.69
CCDC71L-201ENST00000315965 PRG4Q92954 1404 aaPredicted RBP38.07■■■■□ 3.68
CCDC71L-201ENST00000315965 VPS8Q8N3P4 1428 aa38.03■■■■□ 3.68
CCDC71L-201ENST00000315965 FMN1Q68DA7 1419 aa37.95■■■■□ 3.67
CCDC71L-201ENST00000315965 ERCC6L2Q5T890 1561 aa37.88■■■■□ 3.66
CCDC71L-201ENST00000315965 TTBK1Q5TCY1 1321 aaPredicted RBP37.79■■■■□ 3.64
CCDC71L-201ENST00000315965 PCF11O94913 1555 aaKnown RBP37.77■■■■□ 3.64
CCDC71L-201ENST00000315965 PTPRGP23470 1445 aa37.77■■■■□ 3.64
CCDC71L-201ENST00000315965 CASKIN1Q8WXD9 1431 aa37.77■■■■□ 3.64
CCDC71L-201ENST00000315965 FYCO1Q9BQS8 1478 aa37.74■■■■□ 3.63
CCDC71L-201ENST00000315965 RAPGEF6Q8TEU7 1601 aa37.66■■■■□ 3.62
CCDC71L-201ENST00000315965 ATP1B4Q9UN42 357 aaPredicted RBP37.65■■■■□ 3.62
CCDC71L-201ENST00000315965 APLP2Q06481 763 aa37.64■■■■□ 3.62
CCDC71L-201ENST00000315965 ARHGEF11O15085 1522 aa37.64■■■■□ 3.62
CCDC71L-201ENST00000315965 HECW1Q76N89 1606 aa37.63■■■■□ 3.62
CCDC71L-201ENST00000315965 PLB1Q6P1J6 1458 aa37.63■■■■□ 3.61
CCDC71L-201ENST00000315965 ABCA8O94911 1581 aa37.62■■■■□ 3.61
CCDC71L-201ENST00000315965 UACAQ9BZF9 1416 aa37.56■■■■□ 3.6
CCDC71L-201ENST00000315965 MAP3K1Q13233 1512 aa37.53■■■■□ 3.6
CCDC71L-201ENST00000315965 NUP153P49790 1475 aaKnown RBP37.51■■■■□ 3.6
CCDC71L-201ENST00000315965 RIMBP3CA6NJZ7 1639 aa37.51■■■■□ 3.6
CCDC71L-201ENST00000315965 RIMBP3BA6NNM3 1639 aa37.51■■■■□ 3.6
CCDC71L-201ENST00000315965 RIMBP3Q9UFD9 1639 aa37.51■■■■□ 3.6
CCDC71L-201ENST00000315965 LRRIQ1Q96JM4 1722 aa37.5■■■■□ 3.59
CCDC71L-201ENST00000315965 CCDC18Q5T9S5 1454 aa37.5■■■■□ 3.59
CCDC71L-201ENST00000315965 TIAM1Q13009 1591 aa37.49■■■■□ 3.59
CCDC71L-201ENST00000315965 CFAP43Q8NDM7 1665 aa37.48■■■■□ 3.59
CCDC71L-201ENST00000315965 EPRSP07814 1512 aaKnown RBP37.48■■■■□ 3.59
CCDC71L-201ENST00000315965 ABCC2Q92887 1545 aa37.46■■■■□ 3.59
CCDC71L-201ENST00000315965 UHRF1BP1LA0JNW5 1464 aa37.44■■■■□ 3.58
CCDC71L-201ENST00000315965 CDK13Q14004 1512 aaKnown RBP37.39■■■■□ 3.58
CCDC71L-201ENST00000315965 ARID3CA6NKF2 412 aa37.38■■■■□ 3.57
CCDC71L-201ENST00000315965 PPARGC1BQ86YN6 1023 aaKnown RBP37.35■■■■□ 3.57
CCDC71L-201ENST00000315965 ADCY10Q96PN6 1610 aa37.34■■■■□ 3.57
CCDC71L-201ENST00000315965 ATP10BO94823 1461 aa37.33■■■■□ 3.57
CCDC71L-201ENST00000315965 LRRC9Q6ZRR7 1453 aa37.31■■■■□ 3.56
CCDC71L-201ENST00000315965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.31■■■■□ 3.56
CCDC71L-201ENST00000315965 HNRNPUL2Q1KMD3 747 aaKnown RBP37.31■■■■□ 3.56
CCDC71L-201ENST00000315965 KANK4Q5T7N3 995 aaPredicted RBP37.31■■■■□ 3.56
CCDC71L-201ENST00000315965 CDK11AQ9UQ88 783 aaPredicted RBP37.26■■■■□ 3.56
CCDC71L-201ENST00000315965 KDM5BQ9UGL1 1544 aa37.26■■■■□ 3.56
CCDC71L-201ENST00000315965 CYB5RLQ6IPT4 315 aa37.25■■■■□ 3.55
CCDC71L-201ENST00000315965 MTUS2Q5JR59 1369 aa37.25■■■■□ 3.55
CCDC71L-201ENST00000315965 ZCCHC11Q5TAX3 1644 aaKnown RBP37.21■■■■□ 3.55
CCDC71L-201ENST00000315965 EHBP1L1Q8N3D4 1523 aa37.2■■■■□ 3.55
CCDC71L-201ENST00000315965 MAGI3Q5TCQ9 1506 aa37.18■■■■□ 3.54
CCDC71L-201ENST00000315965 PLEKHD1A6NEE1 506 aa37.14■■■■□ 3.54
CCDC71L-201ENST00000315965 TROQ12816 1431 aaPredicted RBP37.11■■■■□ 3.53
CCDC71L-201ENST00000315965 NPM1P06748 294 aaKnown RBP eCLIP37.11■■■■□ 3.53
CCDC71L-201ENST00000315965 SUPT6HQ7KZ85 1726 aaKnown RBP37.08■■■■□ 3.53
CCDC71L-201ENST00000315965 DNAJC5Q9H3Z4 198 aa37.08■■■■□ 3.53
CCDC71L-201ENST00000315965 NCOA2Q15596 1464 aa36.99■■■■□ 3.51
CCDC71L-201ENST00000315965 KIF14Q15058 1648 aa36.95■■■■□ 3.51
CCDC71L-201ENST00000315965 WDR7Q9Y4E6 1490 aa36.93■■■■□ 3.5
CCDC71L-201ENST00000315965 ASXL2Q76L83 1435 aa36.93■■■■□ 3.5
CCDC71L-201ENST00000315965 PHLDB1Q86UU1 1377 aa36.9■■■■□ 3.5
CCDC71L-201ENST00000315965 MAPKBP1O60336 1514 aa36.87■■■■□ 3.49
CCDC71L-201ENST00000315965 TRIM26Q12899 539 aaPredicted RBP36.85■■■■□ 3.49
CCDC71L-201ENST00000315965 KCNH8Q96L42 1107 aa36.84■■■■□ 3.49
CCDC71L-201ENST00000315965 ABCC10Q5T3U5 1492 aa36.81■■■■□ 3.48
CCDC71L-201ENST00000315965 CCNB3Q8WWL7 1395 aa36.8■■■■□ 3.48
CCDC71L-201ENST00000315965 MYOM3Q5VTT5 1437 aa36.8■■■■□ 3.48
CCDC71L-201ENST00000315965 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.76■■■■□ 3.48
CCDC71L-201ENST00000315965 RRBP1Q9P2E9 1410 aaKnown RBP36.75■■■■□ 3.47
CCDC71L-201ENST00000315965 ITSN2Q9NZM3 1697 aa36.74■■■■□ 3.47
CCDC71L-201ENST00000315965 TTC37Q6PGP7 1564 aa36.72■■■■□ 3.47
CCDC71L-201ENST00000315965 FGD6Q6ZV73 1430 aa36.72■■■■□ 3.47
CCDC71L-201ENST00000315965 GPATCH8Q9UKJ3 1502 aaKnown RBP36.71■■■■□ 3.47
CCDC71L-201ENST00000315965 CDC42BPAQ5VT25 1732 aa36.7■■■■□ 3.47
CCDC71L-201ENST00000315965 MIA2Q96PC5 1412 aa36.69■■■■□ 3.46
CCDC71L-201ENST00000315965 ABCA9Q8IUA7 1624 aa36.66■■■■□ 3.46
CCDC71L-201ENST00000315965 MYO5CQ9NQX4 1742 aa36.64■■■■□ 3.46
CCDC71L-201ENST00000315965 PREX2Q70Z35 1606 aa36.62■■■■□ 3.45
CCDC71L-201ENST00000315965 CFDP1Q9UEE9 299 aaPredicted RBP36.61■■■■□ 3.45
CCDC71L-201ENST00000315965 PTPN23Q9H3S7 1636 aa36.6■■■■□ 3.45
CCDC71L-201ENST00000315965 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.58■■■■□ 3.45
CCDC71L-201ENST00000315965 CDC42BPBQ9Y5S2 1711 aa36.58■■■■□ 3.45
CCDC71L-201ENST00000315965 PCGF6Q9BYE7 350 aa36.57■■■■□ 3.45
CCDC71L-201ENST00000315965 FAM50AQ14320 339 aaKnown RBP36.56■■■■□ 3.44
CCDC71L-201ENST00000315965 PLCH2O75038 1416 aa36.56■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms