RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 NUP160Q12769 1436 aa25.9■■□□□ 1.74
TUBB3-201ENST00000315491 CEP170Q5SW79 1584 aa25.89■■□□□ 1.73
TUBB3-201ENST00000315491 CEP162Q5TB80 1403 aa25.88■■□□□ 1.73
TUBB3-201ENST00000315491 KIAA0586Q9BVV6 1533 aa25.85■■□□□ 1.73
TUBB3-201ENST00000315491 RANGAP1P46060 587 aaPredicted RBP25.83■■□□□ 1.73
TUBB3-201ENST00000315491 IQGAP2Q13576 1575 aa25.81■■□□□ 1.72
TUBB3-201ENST00000315491 CLIP1P30622 1438 aa25.81■■□□□ 1.72
TUBB3-201ENST00000315491 ARHGAP35Q9NRY4 1499 aa25.7■■□□□ 1.7
TUBB3-201ENST00000315491 UGGT2Q9NYU1 1516 aa25.7■■□□□ 1.7
TUBB3-201ENST00000315491 EFCAB5A4FU69 1503 aa25.68■■□□□ 1.7
TUBB3-201ENST00000315491 CLASP1Q7Z460 1538 aa25.68■■□□□ 1.7
TUBB3-201ENST00000315491 OSCARQ8IYS5 282 aa25.67■■□□□ 1.7
TUBB3-201ENST00000315491 JPH4Q96JJ6 628 aa25.67■■□□□ 1.7
TUBB3-201ENST00000315491 SAMD9Q5K651 1589 aa25.64■■□□□ 1.7
TUBB3-201ENST00000315491 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
TUBB3-201ENST00000315491 P3H3Q8IVL6 736 aa25.61■■□□□ 1.69
TUBB3-201ENST00000315491 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
TUBB3-201ENST00000315491 DISP1Q96F81 1524 aa25.58■■□□□ 1.69
TUBB3-201ENST00000315491 FHOD3Q2V2M9 1422 aa25.57■■□□□ 1.68
TUBB3-201ENST00000315491 KIAA0556O60303 1618 aa25.56■■□□□ 1.68
TUBB3-201ENST00000315491 CARMIL2Q6F5E8 1435 aa25.55■■□□□ 1.68
TUBB3-201ENST00000315491 PRG4Q92954 1404 aaPredicted RBP25.55■■□□□ 1.68
TUBB3-201ENST00000315491 VPS8Q8N3P4 1428 aa25.52■■□□□ 1.68
TUBB3-201ENST00000315491 FMN1Q68DA7 1419 aa25.45■■□□□ 1.66
TUBB3-201ENST00000315491 ERCC6L2Q5T890 1561 aa25.43■■□□□ 1.66
TUBB3-201ENST00000315491 TTBK1Q5TCY1 1321 aaPredicted RBP25.38■■□□□ 1.65
TUBB3-201ENST00000315491 PTPRGP23470 1445 aa25.34■■□□□ 1.65
TUBB3-201ENST00000315491 PCF11O94913 1555 aaKnown RBP25.34■■□□□ 1.65
TUBB3-201ENST00000315491 CASKIN1Q8WXD9 1431 aa25.34■■□□□ 1.65
TUBB3-201ENST00000315491 FYCO1Q9BQS8 1478 aa25.31■■□□□ 1.64
TUBB3-201ENST00000315491 ATP1B4Q9UN42 357 aaPredicted RBP25.27■■□□□ 1.64
TUBB3-201ENST00000315491 PLB1Q6P1J6 1458 aa25.25■■□□□ 1.63
TUBB3-201ENST00000315491 RAPGEF6Q8TEU7 1601 aa25.24■■□□□ 1.63
TUBB3-201ENST00000315491 APLP2Q06481 763 aa25.24■■□□□ 1.63
TUBB3-201ENST00000315491 ARHGEF11O15085 1522 aa25.24■■□□□ 1.63
TUBB3-201ENST00000315491 HECW1Q76N89 1606 aa25.23■■□□□ 1.63
TUBB3-201ENST00000315491 ABCA8O94911 1581 aa25.23■■□□□ 1.63
TUBB3-201ENST00000315491 UACAQ9BZF9 1416 aa25.19■■□□□ 1.62
TUBB3-201ENST00000315491 NUP153P49790 1475 aaKnown RBP25.17■■□□□ 1.62
TUBB3-201ENST00000315491 MAP3K1Q13233 1512 aa25.16■■□□□ 1.62
TUBB3-201ENST00000315491 TIAM1Q13009 1591 aa25.14■■□□□ 1.62
TUBB3-201ENST00000315491 RIMBP3CA6NJZ7 1639 aa25.14■■□□□ 1.62
TUBB3-201ENST00000315491 RIMBP3BA6NNM3 1639 aa25.14■■□□□ 1.62
TUBB3-201ENST00000315491 RIMBP3Q9UFD9 1639 aa25.14■■□□□ 1.62
TUBB3-201ENST00000315491 CCDC18Q5T9S5 1454 aa25.14■■□□□ 1.62
TUBB3-201ENST00000315491 EPRSP07814 1512 aaKnown RBP25.14■■□□□ 1.61
TUBB3-201ENST00000315491 LRRIQ1Q96JM4 1722 aa25.13■■□□□ 1.61
TUBB3-201ENST00000315491 ABCC2Q92887 1545 aa25.12■■□□□ 1.61
TUBB3-201ENST00000315491 CFAP43Q8NDM7 1665 aa25.12■■□□□ 1.61
TUBB3-201ENST00000315491 UHRF1BP1LA0JNW5 1464 aa25.11■■□□□ 1.61
TUBB3-201ENST00000315491 ARID3CA6NKF2 412 aa25.1■■□□□ 1.61
TUBB3-201ENST00000315491 PPARGC1BQ86YN6 1023 aaKnown RBP25.1■■□□□ 1.61
TUBB3-201ENST00000315491 CDK13Q14004 1512 aaKnown RBP25.09■■□□□ 1.61
TUBB3-201ENST00000315491 KANK4Q5T7N3 995 aaPredicted RBP25.06■■□□□ 1.6
TUBB3-201ENST00000315491 ATP10BO94823 1461 aa25.05■■□□□ 1.6
TUBB3-201ENST00000315491 LRRC9Q6ZRR7 1453 aa25.04■■□□□ 1.6
TUBB3-201ENST00000315491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.03■■□□□ 1.6
TUBB3-201ENST00000315491 HNRNPUL2Q1KMD3 747 aaKnown RBP25.03■■□□□ 1.6
TUBB3-201ENST00000315491 ADCY10Q96PN6 1610 aa25.03■■□□□ 1.6
TUBB3-201ENST00000315491 CYB5RLQ6IPT4 315 aa24.99■■□□□ 1.59
TUBB3-201ENST00000315491 MTUS2Q5JR59 1369 aa24.98■■□□□ 1.59
TUBB3-201ENST00000315491 KDM5BQ9UGL1 1544 aa24.98■■□□□ 1.59
TUBB3-201ENST00000315491 CDK11AQ9UQ88 783 aaPredicted RBP24.98■■□□□ 1.59
TUBB3-201ENST00000315491 MAGI3Q5TCQ9 1506 aa24.97■■□□□ 1.59
TUBB3-201ENST00000315491 EHBP1L1Q8N3D4 1523 aa24.95■■□□□ 1.59
TUBB3-201ENST00000315491 ZCCHC11Q5TAX3 1644 aaKnown RBP24.94■■□□□ 1.58
TUBB3-201ENST00000315491 PLEKHD1A6NEE1 506 aa24.91■■□□□ 1.58
TUBB3-201ENST00000315491 TROQ12816 1431 aaPredicted RBP24.9■■□□□ 1.58
TUBB3-201ENST00000315491 NPM1P06748 294 aaKnown RBP eCLIP24.88■■□□□ 1.57
TUBB3-201ENST00000315491 DNAJC5Q9H3Z4 198 aa24.87■■□□□ 1.57
TUBB3-201ENST00000315491 SUPT6HQ7KZ85 1726 aaKnown RBP24.84■■□□□ 1.57
TUBB3-201ENST00000315491 NCOA2Q15596 1464 aa24.82■■□□□ 1.56
TUBB3-201ENST00000315491 PHLDB1Q86UU1 1377 aa24.78■■□□□ 1.56
TUBB3-201ENST00000315491 ASXL2Q76L83 1435 aa24.77■■□□□ 1.56
TUBB3-201ENST00000315491 WDR7Q9Y4E6 1490 aa24.77■■□□□ 1.56
TUBB3-201ENST00000315491 KIF14Q15058 1648 aa24.76■■□□□ 1.55
TUBB3-201ENST00000315491 TRIM26Q12899 539 aaPredicted RBP24.74■■□□□ 1.55
TUBB3-201ENST00000315491 KCNH8Q96L42 1107 aa24.72■■□□□ 1.55
TUBB3-201ENST00000315491 MAPKBP1O60336 1514 aa24.71■■□□□ 1.55
TUBB3-201ENST00000315491 ABCC10Q5T3U5 1492 aa24.7■■□□□ 1.54
TUBB3-201ENST00000315491 MYOM3Q5VTT5 1437 aa24.69■■□□□ 1.54
TUBB3-201ENST00000315491 CCNB3Q8WWL7 1395 aa24.69■■□□□ 1.54
TUBB3-201ENST00000315491 RRBP1Q9P2E9 1410 aaKnown RBP24.67■■□□□ 1.54
TUBB3-201ENST00000315491 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.66■■□□□ 1.54
TUBB3-201ENST00000315491 GPATCH8Q9UKJ3 1502 aaKnown RBP24.63■■□□□ 1.53
TUBB3-201ENST00000315491 FGD6Q6ZV73 1430 aa24.63■■□□□ 1.53
TUBB3-201ENST00000315491 TTC37Q6PGP7 1564 aa24.63■■□□□ 1.53
TUBB3-201ENST00000315491 MIA2Q96PC5 1412 aa24.6■■□□□ 1.53
TUBB3-201ENST00000315491 ITSN2Q9NZM3 1697 aa24.6■■□□□ 1.53
TUBB3-201ENST00000315491 CDC42BPAQ5VT25 1732 aa24.57■■□□□ 1.52
TUBB3-201ENST00000315491 ABCA9Q8IUA7 1624 aa24.57■■□□□ 1.52
TUBB3-201ENST00000315491 PCGF6Q9BYE7 350 aa24.57■■□□□ 1.52
TUBB3-201ENST00000315491 CFDP1Q9UEE9 299 aaPredicted RBP24.57■■□□□ 1.52
TUBB3-201ENST00000315491 PTPN23Q9H3S7 1636 aa24.54■■□□□ 1.52
TUBB3-201ENST00000315491 PREX2Q70Z35 1606 aa24.54■■□□□ 1.52
TUBB3-201ENST00000315491 FAM50AQ14320 339 aaKnown RBP24.54■■□□□ 1.52
TUBB3-201ENST00000315491 TCOF1Q13428 1488 aaKnown RBP24.53■■□□□ 1.52
TUBB3-201ENST00000315491 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.53■■□□□ 1.52
TUBB3-201ENST00000315491 MYO5CQ9NQX4 1742 aa24.53■■□□□ 1.52
TUBB3-201ENST00000315491 PLCH2O75038 1416 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms