RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 NISCHQ9Y2I1 1504 aa37.6■■■■□ 3.61
TUBB3-201ENST00000315491 CCDC180Q9P1Z9 1646 aa33.03■■■□□ 2.88
TUBB3-201ENST00000315491 ABCC9O60706 1549 aa31.64■■■□□ 2.66
TUBB3-201ENST00000315491 ZCCHC6Q5VYS8 1495 aaKnown RBP31.5■■■□□ 2.63
TUBB3-201ENST00000315491 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
TUBB3-201ENST00000315491 DCAF1Q9Y4B6 1507 aa31.12■■■□□ 2.57
TUBB3-201ENST00000315491 MYO15BQ96JP2 1530 aa30.95■■■□□ 2.55
TUBB3-201ENST00000315491 NACADO15069 1562 aa30.89■■■□□ 2.54
TUBB3-201ENST00000315491 RB1CC1Q8TDY2 1594 aa30.73■■■□□ 2.51
TUBB3-201ENST00000315491 SCRIBQ14160 1630 aa30.27■■■□□ 2.44
TUBB3-201ENST00000315491 SHROOM4Q9ULL8 1493 aa30.26■■■□□ 2.44
TUBB3-201ENST00000315491 UNC13AQ9UPW8 1703 aa30.02■■■□□ 2.4
TUBB3-201ENST00000315491 BICRAQ9NZM4 1560 aa29.78■■■□□ 2.36
TUBB3-201ENST00000315491 PABPN1Q86U42 306 aaKnown RBP eCLIP29.73■■■□□ 2.35
TUBB3-201ENST00000315491 CECR2Q9BXF3 1484 aa29.23■■■□□ 2.27
TUBB3-201ENST00000315491 BAZ1AQ9NRL2 1556 aaPredicted RBP29.09■■■□□ 2.25
TUBB3-201ENST00000315491 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.23
TUBB3-201ENST00000315491 SMARCA4P51532 1647 aa29■■■□□ 2.23
TUBB3-201ENST00000315491 RSF1Q96T23 1441 aaPredicted RBP28.97■■■□□ 2.23
TUBB3-201ENST00000315491 EIF4G1Q04637 1599 aaKnown RBP28.94■■■□□ 2.22
TUBB3-201ENST00000315491 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
TUBB3-201ENST00000315491 WIZO95785 1651 aa28.73■■■□□ 2.19
TUBB3-201ENST00000315491 PEG3Q9GZU2 1588 aa28.68■■■□□ 2.18
TUBB3-201ENST00000315491 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
TUBB3-201ENST00000315491 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
TUBB3-201ENST00000315491 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
TUBB3-201ENST00000315491 NCAPD3P42695 1498 aa28.51■■■□□ 2.15
TUBB3-201ENST00000315491 BAZ1BQ9UIG0 1483 aaKnown RBP28.47■■■□□ 2.15
TUBB3-201ENST00000315491 TOP2AP11388 1531 aaKnown RBP28.47■■■□□ 2.15
TUBB3-201ENST00000315491 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
TUBB3-201ENST00000315491 DNAJC5BQ9UF47 199 aa28.33■■■□□ 2.13
TUBB3-201ENST00000315491 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
TUBB3-201ENST00000315491 CADPSQ9ULU8 1353 aa27.74■■■□□ 2.03
TUBB3-201ENST00000315491 CFTRP13569 1480 aa27.73■■■□□ 2.03
TUBB3-201ENST00000315491 LAMC3Q9Y6N6 1575 aa27.61■■■□□ 2.01
TUBB3-201ENST00000315491 NESP48681 1621 aa27.61■■■□□ 2.01
TUBB3-201ENST00000315491 PRDM2Q13029 1718 aa27.52■■■□□ 2
TUBB3-201ENST00000315491 PDS5BQ9NTI5 1447 aa27.42■■□□□ 1.98
TUBB3-201ENST00000315491 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
TUBB3-201ENST00000315491 CHIC1Q5VXU3 224 aa27.41■■□□□ 1.98
TUBB3-201ENST00000315491 ABCC8Q09428 1581 aa27.36■■□□□ 1.97
TUBB3-201ENST00000315491 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
TUBB3-201ENST00000315491 WRNQ14191 1432 aaPredicted RBP eCLIP27.3■■□□□ 1.96
TUBB3-201ENST00000315491 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
TUBB3-201ENST00000315491 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
TUBB3-201ENST00000315491 ERCC6Q03468 1493 aa27.2■■□□□ 1.94
TUBB3-201ENST00000315491 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
TUBB3-201ENST00000315491 CUX1P39880 1505 aa27.16■■□□□ 1.94
TUBB3-201ENST00000315491 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
TUBB3-201ENST00000315491 BIVM-ERCC5R4GMW8 1640 aa27.1■■□□□ 1.93
TUBB3-201ENST00000315491 MRC2Q9UBG0 1479 aa27.1■■□□□ 1.93
TUBB3-201ENST00000315491 URB2Q14146 1524 aaKnown RBP27.1■■□□□ 1.93
TUBB3-201ENST00000315491 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
TUBB3-201ENST00000315491 TOPBP1Q92547 1522 aa27.07■■□□□ 1.92
TUBB3-201ENST00000315491 THOC2Q8NI27 1593 aaKnown RBP26.99■■□□□ 1.91
TUBB3-201ENST00000315491 WDR62O43379 1518 aa26.98■■□□□ 1.91
TUBB3-201ENST00000315491 FGD5Q6ZNL6 1462 aa26.95■■□□□ 1.91
TUBB3-201ENST00000315491 POLA1P09884 1462 aaPredicted RBP26.9■■□□□ 1.9
TUBB3-201ENST00000315491 SOGA1O94964 1423 aa26.81■■□□□ 1.88
TUBB3-201ENST00000315491 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
TUBB3-201ENST00000315491 CUX2O14529 1486 aa26.76■■□□□ 1.87
TUBB3-201ENST00000315491 ABCA10Q8WWZ4 1543 aa26.71■■□□□ 1.87
TUBB3-201ENST00000315491 IFT140Q96RY7 1462 aa26.7■■□□□ 1.86
TUBB3-201ENST00000315491 TARBP1Q13395 1621 aaKnown RBP26.69■■□□□ 1.86
TUBB3-201ENST00000315491 RUSC2Q8N2Y8 1516 aa26.68■■□□□ 1.86
TUBB3-201ENST00000315491 FAM9AQ8IZU1 332 aaPredicted RBP26.68■■□□□ 1.86
TUBB3-201ENST00000315491 EEA1Q15075 1411 aa26.67■■□□□ 1.86
TUBB3-201ENST00000315491 KIF27Q86VH2 1401 aa26.66■■□□□ 1.86
TUBB3-201ENST00000315491 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
TUBB3-201ENST00000315491 TDRD9Q8NDG6 1382 aaKnown RBP26.57■■□□□ 1.84
TUBB3-201ENST00000315491 CSRNP3Q8WYN3 585 aa26.54■■□□□ 1.84
TUBB3-201ENST00000315491 ABCA5Q8WWZ7 1642 aa26.53■■□□□ 1.84
TUBB3-201ENST00000315491 ZNF608Q9ULD9 1512 aaPredicted RBP26.53■■□□□ 1.84
TUBB3-201ENST00000315491 GAPVD1Q14C86 1478 aa26.51■■□□□ 1.83
TUBB3-201ENST00000315491 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.83
TUBB3-201ENST00000315491 IGF1RP08069 1367 aa26.46■■□□□ 1.83
TUBB3-201ENST00000315491 EIF4G3O43432 1585 aaKnown RBP26.43■■□□□ 1.82
TUBB3-201ENST00000315491 ERICH3Q5RHP9 1530 aa26.4■■□□□ 1.82
TUBB3-201ENST00000315491 GRIN2BQ13224 1484 aa26.39■■□□□ 1.81
TUBB3-201ENST00000315491 PBRM1Q86U86 1689 aa26.37■■□□□ 1.81
TUBB3-201ENST00000315491 PRXQ9BXM0 1461 aa26.35■■□□□ 1.81
TUBB3-201ENST00000315491 CARMIL1Q5VZK9 1371 aa26.32■■□□□ 1.8
TUBB3-201ENST00000315491 KIF21BO75037 1637 aa26.32■■□□□ 1.8
TUBB3-201ENST00000315491 CUL7Q14999 1698 aa26.31■■□□□ 1.8
TUBB3-201ENST00000315491 LOC105371045A0A1W2PR82 267 aa26.3■■□□□ 1.8
TUBB3-201ENST00000315491 EHMT2Q96KQ7 1210 aa26.28■■□□□ 1.8
TUBB3-201ENST00000315491 GOLGA3Q08378 1498 aa26.26■■□□□ 1.79
TUBB3-201ENST00000315491 SNAPC4Q5SXM2 1469 aa26.26■■□□□ 1.79
TUBB3-201ENST00000315491 RAPGEF2Q9Y4G8 1499 aa26.25■■□□□ 1.79
TUBB3-201ENST00000315491 FHAD1B1AJZ9 1412 aa26.23■■□□□ 1.79
TUBB3-201ENST00000315491 ADAMTS12P58397 1594 aa26.23■■□□□ 1.79
TUBB3-201ENST00000315491 MAGI1Q96QZ7 1491 aaPredicted RBP26.22■■□□□ 1.79
TUBB3-201ENST00000315491 UBTFP17480 764 aaKnown RBP26.14■■□□□ 1.78
TUBB3-201ENST00000315491 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
TUBB3-201ENST00000315491 TNIKQ9UKE5 1360 aa26.08■■□□□ 1.76
TUBB3-201ENST00000315491 CHMP7Q8WUX9 453 aaPredicted RBP26.07■■□□□ 1.76
TUBB3-201ENST00000315491 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
TUBB3-201ENST00000315491 FBLN2P98095 1184 aa26.03■■□□□ 1.76
TUBB3-201ENST00000315491 CHD1O14646 1710 aa25.93■■□□□ 1.74
TUBB3-201ENST00000315491 CTTNBP2Q8WZ74 1663 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms