RNA–Protein interactions for RNA: ENST00000315127.8

EDC3-201, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 3,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-201ENST00000315127 KCNH8Q96L42 1107 aa20.21■□□□□ 0.83
EDC3-201ENST00000315127 CDK11AQ9UQ88 783 aaPredicted RBP20.15■□□□□ 0.82
EDC3-201ENST00000315127 AQRO60306 1485 aaKnown RBP eCLIP20.13■□□□□ 0.815e-8■■■■□ 24.7
EDC3-201ENST00000315127 CCNB3Q8WWL7 1395 aa20.12■□□□□ 0.81
EDC3-201ENST00000315127 DDX10Q13206 875 aaKnown RBP20.1■□□□□ 0.81
EDC3-201ENST00000315127 MIER1Q8N108 512 aa20.1■□□□□ 0.81
EDC3-201ENST00000315127 HMGXB3Q12766 1538 aa20.09■□□□□ 0.81
EDC3-201ENST00000315127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.813e-7■■□□□ 13.1
EDC3-201ENST00000315127 PEG3Q9GZU2 1588 aa20.06■□□□□ 0.8
EDC3-201ENST00000315127 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
EDC3-201ENST00000315127 FOXD1Q16676 465 aa20.04■□□□□ 0.8
EDC3-201ENST00000315127 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
EDC3-201ENST00000315127 TOP2BQ02880 1626 aa20.02■□□□□ 0.8
EDC3-201ENST00000315127 KIF21BO75037 1637 aa20.02■□□□□ 0.79
EDC3-201ENST00000315127 GTF3C3Q9Y5Q9 886 aa20.01■□□□□ 0.79
EDC3-201ENST00000315127 CFDP1Q9UEE9 299 aaPredicted RBP19.99■□□□□ 0.79
EDC3-201ENST00000315127 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
EDC3-201ENST00000315127 PLEKHD1A6NEE1 506 aa19.98■□□□□ 0.79
EDC3-201ENST00000315127 TONSLQ96HA7 1378 aa19.98■□□□□ 0.79
EDC3-201ENST00000315127 FHAD1B1AJZ9 1412 aa19.98■□□□□ 0.79
EDC3-201ENST00000315127 GAPVD1Q14C86 1478 aa19.97■□□□□ 0.79
EDC3-201ENST00000315127 PRXQ9BXM0 1461 aa19.97■□□□□ 0.79
EDC3-201ENST00000315127 TOPBP1Q92547 1522 aa19.96■□□□□ 0.79
EDC3-201ENST00000315127 KDM2AQ9Y2K7 1162 aa19.95■□□□□ 0.78
EDC3-201ENST00000315127 SLC4A1APQ9BWU0 796 aaKnown RBP19.92■□□□□ 0.78
EDC3-201ENST00000315127 SENP3-EIF4A1A0A087X0R7 540 aa19.92■□□□□ 0.78
EDC3-201ENST00000315127 JPH4Q96JJ6 628 aa19.92■□□□□ 0.78
EDC3-201ENST00000315127 ARHGAP35Q9NRY4 1499 aa19.92■□□□□ 0.78
EDC3-201ENST00000315127 RAB3GAP2Q9H2M9 1393 aa19.91■□□□□ 0.78
EDC3-201ENST00000315127 TSPY4P0CV99 314 aa19.89■□□□□ 0.77
EDC3-201ENST00000315127 TSPY10P0CW01 314 aa19.89■□□□□ 0.77
EDC3-201ENST00000315127 BCANQ96GW7 911 aa19.88■□□□□ 0.77
EDC3-201ENST00000315127 PHLDB1Q86UU1 1377 aa19.85■□□□□ 0.77
EDC3-201ENST00000315127 RGL3Q3MIN7 710 aa19.84■□□□□ 0.77
EDC3-201ENST00000315127 ACIN1Q9UKV3 1341 aaKnown RBP19.83■□□□□ 0.77
EDC3-201ENST00000315127 ZNF644Q9H582 1327 aaPredicted RBP19.83■□□□□ 0.76
EDC3-201ENST00000315127 ANP32CO43423 234 aa19.8■□□□□ 0.76
EDC3-201ENST00000315127 FMN1Q68DA7 1419 aa19.8■□□□□ 0.76
EDC3-201ENST00000315127 PLPPR3Q6T4P5 718 aa19.79■□□□□ 0.76
EDC3-201ENST00000315127 URB2Q14146 1524 aaKnown RBP19.78■□□□□ 0.76
EDC3-201ENST00000315127 CHGAP10645 457 aaKnown RBP19.77■□□□□ 0.76
EDC3-201ENST00000315127 SETD5Q9C0A6 1442 aa19.75■□□□□ 0.75
EDC3-201ENST00000315127 NPM1P06748 294 aaKnown RBP eCLIP19.75■□□□□ 0.75
EDC3-201ENST00000315127 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
EDC3-201ENST00000315127 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
EDC3-201ENST00000315127 NEFLP07196 543 aa19.72■□□□□ 0.75
EDC3-201ENST00000315127 HNRNPMP52272 730 aaKnown RBP eCLIP19.72■□□□□ 0.75
EDC3-201ENST00000315127 ZNF608Q9ULD9 1512 aaPredicted RBP19.7■□□□□ 0.74
EDC3-201ENST00000315127 ERICH3Q5RHP9 1530 aa19.69■□□□□ 0.74
EDC3-201ENST00000315127 DNMBPQ6XZF7 1577 aa19.68■□□□□ 0.74
EDC3-201ENST00000315127 FAM9BQ8IZU0 186 aa19.63■□□□□ 0.73
EDC3-201ENST00000315127 LRRC9Q6ZRR7 1453 aa19.63■□□□□ 0.73
EDC3-201ENST00000315127 SALL2Q9Y467 1007 aaPredicted RBP19.63■□□□□ 0.73
EDC3-201ENST00000315127 ABCA10Q8WWZ4 1543 aa19.62■□□□□ 0.73
EDC3-201ENST00000315127 MRC2Q9UBG0 1479 aa19.62■□□□□ 0.73
EDC3-201ENST00000315127 PELP1Q8IZL8 1130 aaKnown RBP19.61■□□□□ 0.73
EDC3-201ENST00000315127 MPHOSPH9Q99550 1183 aa19.61■□□□□ 0.73
EDC3-201ENST00000315127 CARMIL2Q6F5E8 1435 aa19.6■□□□□ 0.73
EDC3-201ENST00000315127 BIVM-ERCC5R4GMW8 1640 aa19.6■□□□□ 0.73
EDC3-201ENST00000315127 PKD2Q13563 968 aa19.58■□□□□ 0.73
EDC3-201ENST00000315127 GRIN2BQ13224 1484 aa19.58■□□□□ 0.72
EDC3-201ENST00000315127 SNAPC4Q5SXM2 1469 aa19.57■□□□□ 0.72
EDC3-201ENST00000315127 EIF4G2P78344 907 aaKnown RBP eCLIP19.56■□□□□ 0.72
EDC3-201ENST00000315127 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
EDC3-201ENST00000315127 HNRNPUQ00839 825 aaKnown RBP eCLIP19.55■□□□□ 0.72
EDC3-201ENST00000315127 L3MBTL2Q969R5 705 aa19.52■□□□□ 0.72
EDC3-201ENST00000315127 PTPRGP23470 1445 aa19.52■□□□□ 0.71
EDC3-201ENST00000315127 PPP1R15AO75807 674 aaPredicted RBP19.51■□□□□ 0.71
EDC3-201ENST00000315127 FGD6Q6ZV73 1430 aa19.5■□□□□ 0.71
EDC3-201ENST00000315127 DCAF11Q8TEB1 546 aa19.5■□□□□ 0.71
EDC3-201ENST00000315127 CLSPNQ9HAW4 1339 aa19.5■□□□□ 0.71
EDC3-201ENST00000315127 CASKIN1Q8WXD9 1431 aa19.5■□□□□ 0.71
EDC3-201ENST00000315127 IRX6P78412 446 aaPredicted RBP19.49■□□□□ 0.71
EDC3-201ENST00000315127 PRDM2Q13029 1718 aa19.47■□□□□ 0.71
EDC3-201ENST00000315127 NCOA2Q15596 1464 aa19.47■□□□□ 0.71
EDC3-201ENST00000315127 CDK13Q14004 1512 aaKnown RBP19.47■□□□□ 0.71
EDC3-201ENST00000315127 PRG4Q92954 1404 aaPredicted RBP19.46■□□□□ 0.71
EDC3-201ENST00000315127 NUP155O75694 1391 aa19.46■□□□□ 0.7
EDC3-201ENST00000315127 HSPA5P11021 654 aaKnown RBP19.45■□□□□ 0.7
EDC3-201ENST00000315127 RRBP1Q9P2E9 1410 aaKnown RBP19.43■□□□□ 0.7
EDC3-201ENST00000315127 CARD11Q9BXL7 1154 aa19.43■□□□□ 0.7
EDC3-201ENST00000315127 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
EDC3-201ENST00000315127 PCF11O94913 1555 aaKnown RBP19.43■□□□□ 0.7
EDC3-201ENST00000315127 CYB5RLQ6IPT4 315 aa19.42■□□□□ 0.7
EDC3-201ENST00000315127 MRS2Q9HD23 443 aa19.42■□□□□ 0.7
EDC3-201ENST00000315127 CCDC18Q5T9S5 1454 aa19.41■□□□□ 0.7
EDC3-201ENST00000315127 GGT6Q6P531 493 aa19.41■□□□□ 0.7
EDC3-201ENST00000315127 TIAM1Q13009 1591 aa19.41■□□□□ 0.7
EDC3-201ENST00000315127 FKBP8Q14318 412 aa19.41■□□□□ 0.7
EDC3-201ENST00000315127 MYOM3Q5VTT5 1437 aa19.41■□□□□ 0.7
EDC3-201ENST00000315127 PLB1Q6P1J6 1458 aa19.38■□□□□ 0.69
EDC3-201ENST00000315127 MLECQ14165 292 aa19.38■□□□□ 0.69
EDC3-201ENST00000315127 FYCO1Q9BQS8 1478 aa19.36■□□□□ 0.69
EDC3-201ENST00000315127 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
EDC3-201ENST00000315127 KIF21AQ7Z4S6 1674 aa19.35■□□□□ 0.69
EDC3-201ENST00000315127 EFCAB2Q5VUJ9 269 aa19.33■□□□□ 0.68
EDC3-201ENST00000315127 AFAP1Q8N556 730 aa19.32■□□□□ 0.68
EDC3-201ENST00000315127 NUTM2DQ5VT03 806 aaPredicted RBP19.32■□□□□ 0.68
EDC3-201ENST00000315127 KIF3BO15066 747 aa19.32■□□□□ 0.68
EDC3-201ENST00000315127 ANKRD30AQ9BXX3 1397 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms