RNA–Protein interactions for RNA: ENST00000315127.8

EDC3-201, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 3,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-201ENST00000315127 NISCHQ9Y2I1 1504 aa27.78■■■□□ 2.04
EDC3-201ENST00000315127 DCAF8L2P0C7V8 631 aa26.12■■□□□ 1.77
EDC3-201ENST00000315127 SHROOM4Q9ULL8 1493 aa25.39■■□□□ 1.66
EDC3-201ENST00000315127 SUPT5HO00267 1087 aaKnown RBP25.01■■□□□ 1.59
EDC3-201ENST00000315127 EHMT2Q96KQ7 1210 aa23.88■■□□□ 1.41
EDC3-201ENST00000315127 ABCC9O60706 1549 aa23.61■■□□□ 1.37
EDC3-201ENST00000315127 FAM9AQ8IZU1 332 aaPredicted RBP23.45■■□□□ 1.34
EDC3-201ENST00000315127 ZCCHC6Q5VYS8 1495 aaKnown RBP23.15■■□□□ 1.3
EDC3-201ENST00000315127 PABPN1Q86U42 306 aaKnown RBP eCLIP23.12■■□□□ 1.29
EDC3-201ENST00000315127 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
EDC3-201ENST00000315127 CCDC180Q9P1Z9 1646 aa22.96■■□□□ 1.27
EDC3-201ENST00000315127 TRIM41Q8WV44 630 aa22.95■■□□□ 1.27
EDC3-201ENST00000315127 LOC105371045A0A1W2PR82 267 aa22.93■■□□□ 1.26
EDC3-201ENST00000315127 TTBK1Q5TCY1 1321 aaPredicted RBP22.87■■□□□ 1.25
EDC3-201ENST00000315127 PCGF6Q9BYE7 350 aa22.77■■□□□ 1.24
EDC3-201ENST00000315127 SCRIBQ14160 1630 aa22.76■■□□□ 1.23
EDC3-201ENST00000315127 RANGAP1P46060 587 aaPredicted RBP22.74■■□□□ 1.23
EDC3-201ENST00000315127 PPARGC1BQ86YN6 1023 aaKnown RBP22.67■■□□□ 1.22
EDC3-201ENST00000315127 UBTFP17480 764 aaKnown RBP22.33■■□□□ 1.16
EDC3-201ENST00000315127 CECR2Q9BXF3 1484 aa22.17■■□□□ 1.14
EDC3-201ENST00000315127 RSF1Q96T23 1441 aaPredicted RBP22.15■■□□□ 1.14
EDC3-201ENST00000315127 MYO15BQ96JP2 1530 aa22.13■■□□□ 1.13
EDC3-201ENST00000315127 DCAF1Q9Y4B6 1507 aa22■■□□□ 1.11
EDC3-201ENST00000315127 APLP2Q06481 763 aa21.96■■□□□ 1.11
EDC3-201ENST00000315127 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
EDC3-201ENST00000315127 RB1CC1Q8TDY2 1594 aa21.94■■□□□ 1.1
EDC3-201ENST00000315127 NACADO15069 1562 aa21.94■■□□□ 1.1
EDC3-201ENST00000315127 MROH2BQ7Z745 1585 aa21.79■■□□□ 1.08
EDC3-201ENST00000315127 TRIM26Q12899 539 aaPredicted RBP21.78■■□□□ 1.08
EDC3-201ENST00000315127 CCER1Q8TC90 406 aaPredicted RBP21.71■■□□□ 1.07
EDC3-201ENST00000315127 HRCP23327 699 aa21.62■■□□□ 1.05
EDC3-201ENST00000315127 ITGAEP38570 1179 aa21.6■■□□□ 1.05
EDC3-201ENST00000315127 HNRNPUL2Q1KMD3 747 aaKnown RBP21.6■■□□□ 1.05
EDC3-201ENST00000315127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.59■■□□□ 1.05
EDC3-201ENST00000315127 CSRNP3Q8WYN3 585 aa21.58■■□□□ 1.04
EDC3-201ENST00000315127 WIZO95785 1651 aa21.54■■□□□ 1.04
EDC3-201ENST00000315127 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
EDC3-201ENST00000315127 P3H3Q8IVL6 736 aa21.44■■□□□ 1.02
EDC3-201ENST00000315127 CCDC88BA6NC98 1476 aa21.35■■□□□ 1.01
EDC3-201ENST00000315127 ABCC8Q09428 1581 aa21.35■■□□□ 1.01
EDC3-201ENST00000315127 BAZ1BQ9UIG0 1483 aaKnown RBP21.33■■□□□ 1.01
EDC3-201ENST00000315127 ARID3CA6NKF2 412 aa21.28■■□□□ 1
EDC3-201ENST00000315127 SOGA1O94964 1423 aa21.27■■□□□ 1
EDC3-201ENST00000315127 WRNQ14191 1432 aaPredicted RBP eCLIP21.19■□□□□ 0.98
EDC3-201ENST00000315127 FBLN2P98095 1184 aa21.18■□□□□ 0.98
EDC3-201ENST00000315127 ZEB1P37275 1124 aaPredicted RBP21.14■□□□□ 0.97
EDC3-201ENST00000315127 SMARCA4P51532 1647 aa21.09■□□□□ 0.97
EDC3-201ENST00000315127 RUSC2Q8N2Y8 1516 aa21.05■□□□□ 0.96
EDC3-201ENST00000315127 FAM50AQ14320 339 aaKnown RBP21.05■□□□□ 0.96
EDC3-201ENST00000315127 ATAD2BQ9ULI0 1458 aa21.04■□□□□ 0.96
EDC3-201ENST00000315127 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
EDC3-201ENST00000315127 YTHDC1Q96MU7 727 aaKnown RBP20.98■□□□□ 0.95
EDC3-201ENST00000315127 CEP162Q5TB80 1403 aa20.98■□□□□ 0.95
EDC3-201ENST00000315127 DNAJC5BQ9UF47 199 aa20.92■□□□□ 0.94
EDC3-201ENST00000315127 CLIP1P30622 1438 aa20.87■□□□□ 0.93
EDC3-201ENST00000315127 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
EDC3-201ENST00000315127 BICRAQ9NZM4 1560 aa20.83■□□□□ 0.93
EDC3-201ENST00000315127 NEUROD1Q13562 356 aa20.79■□□□□ 0.92
EDC3-201ENST00000315127 GOLGA3Q08378 1498 aa20.77■□□□□ 0.92
EDC3-201ENST00000315127 TNIKQ9UKE5 1360 aa20.75■□□□□ 0.91
EDC3-201ENST00000315127 CNGB1Q14028 1251 aaPredicted RBP20.7■□□□□ 0.9
EDC3-201ENST00000315127 CUX2O14529 1486 aa20.7■□□□□ 0.9
EDC3-201ENST00000315127 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
EDC3-201ENST00000315127 UNC13AQ9UPW8 1703 aa20.68■□□□□ 0.9
EDC3-201ENST00000315127 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
EDC3-201ENST00000315127 TDRD9Q8NDG6 1382 aaKnown RBP20.66■□□□□ 0.9
EDC3-201ENST00000315127 EEA1Q15075 1411 aa20.65■□□□□ 0.9
EDC3-201ENST00000315127 CEP164Q9UPV0 1460 aa20.64■□□□□ 0.89
EDC3-201ENST00000315127 DIEXFQ68CQ4 756 aaKnown RBP20.63■□□□□ 0.89
EDC3-201ENST00000315127 RAPGEF2Q9Y4G8 1499 aa20.63■□□□□ 0.89
EDC3-201ENST00000315127 CADPSQ9ULU8 1353 aa20.63■□□□□ 0.89
EDC3-201ENST00000315127 KANK4Q5T7N3 995 aaPredicted RBP20.63■□□□□ 0.89
EDC3-201ENST00000315127 TRIM52Q96A61 297 aa20.59■□□□□ 0.89
EDC3-201ENST00000315127 CHIC2Q9UKJ5 165 aa20.59■□□□□ 0.89
EDC3-201ENST00000315127 ZNF777Q9ULD5 760 aaPredicted RBP20.58■□□□□ 0.88
EDC3-201ENST00000315127 MYT1LQ9UL68 1186 aa20.56■□□□□ 0.88
EDC3-201ENST00000315127 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
EDC3-201ENST00000315127 POLR3GLQ9BT43 218 aa20.53■□□□□ 0.88
EDC3-201ENST00000315127 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
EDC3-201ENST00000315127 NESP48681 1621 aa20.51■□□□□ 0.87
EDC3-201ENST00000315127 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
EDC3-201ENST00000315127 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
EDC3-201ENST00000315127 HIRIP3Q9BW71 556 aaPredicted RBP20.42■□□□□ 0.86
EDC3-201ENST00000315127 RAD54L2Q9Y4B4 1467 aa20.42■□□□□ 0.86
EDC3-201ENST00000315127 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
EDC3-201ENST00000315127 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
EDC3-201ENST00000315127 CENPBP07199 599 aaPredicted RBP20.38■□□□□ 0.85
EDC3-201ENST00000315127 ZNF326Q5BKZ1 582 aaKnown RBP20.38■□□□□ 0.85
EDC3-201ENST00000315127 MTUS2Q5JR59 1369 aa20.37■□□□□ 0.85
EDC3-201ENST00000315127 RRP7BPQ9NSQ0 103 aa20.35■□□□□ 0.85
EDC3-201ENST00000315127 CC2D2AQ9P2K1 1620 aa20.35■□□□□ 0.85
EDC3-201ENST00000315127 ZNF316A6NFI3 1004 aaPredicted RBP20.35■□□□□ 0.85
EDC3-201ENST00000315127 VPS8Q8N3P4 1428 aa20.33■□□□□ 0.85
EDC3-201ENST00000315127 FGD5Q6ZNL6 1462 aa20.3■□□□□ 0.84
EDC3-201ENST00000315127 IGF1RP08069 1367 aa20.3■□□□□ 0.84
EDC3-201ENST00000315127 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.84
EDC3-201ENST00000315127 CFTRP13569 1480 aa20.26■□□□□ 0.83
EDC3-201ENST00000315127 FHOD3Q2V2M9 1422 aa20.26■□□□□ 0.83
EDC3-201ENST00000315127 SIN3AQ96ST3 1273 aa20.24■□□□□ 0.83
EDC3-201ENST00000315127 CUX1P39880 1505 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms