RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 NEFMP07197 916 aa12.49□□□□□ -0.41
C2CD3-201ENST00000313663 ZNF326Q5BKZ1 582 aaKnown RBP12.48□□□□□ -0.41
C2CD3-201ENST00000313663 BCANQ96GW7 911 aa12.48□□□□□ -0.41
C2CD3-201ENST00000313663 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
C2CD3-201ENST00000313663 IGF1RP08069 1367 aa12.46□□□□□ -0.41
C2CD3-201ENST00000313663 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.42
C2CD3-201ENST00000313663 CARMIL1Q5VZK9 1371 aa12.43□□□□□ -0.42
C2CD3-201ENST00000313663 RAD54L2Q9Y4B4 1467 aa12.43□□□□□ -0.42
C2CD3-201ENST00000313663 NEUROD1Q13562 356 aa12.42□□□□□ -0.42
C2CD3-201ENST00000313663 URB2Q14146 1524 aaKnown RBP12.42□□□□□ -0.42
C2CD3-201ENST00000313663 ESF1Q9H501 851 aaKnown RBP12.42□□□□□ -0.42
C2CD3-201ENST00000313663 ABCA10Q8WWZ4 1543 aa12.42□□□□□ -0.42
C2CD3-201ENST00000313663 VPS8Q8N3P4 1428 aa12.41□□□□□ -0.42
C2CD3-201ENST00000313663 DIEXFQ68CQ4 756 aaKnown RBP12.36□□□□□ -0.43
C2CD3-201ENST00000313663 TDRD9Q8NDG6 1382 aaKnown RBP12.35□□□□□ -0.43
C2CD3-201ENST00000313663 ANP32CO43423 234 aa12.35□□□□□ -0.43
C2CD3-201ENST00000313663 CANXP27824 592 aaKnown RBP12.34□□□□□ -0.43
C2CD3-201ENST00000313663 BCL11AQ9H165 835 aa12.33□□□□□ -0.44
C2CD3-201ENST00000313663 CDK11AQ9UQ88 783 aaPredicted RBP12.33□□□□□ -0.44
C2CD3-201ENST00000313663 KIF21AQ7Z4S6 1674 aa12.33□□□□□ -0.44
C2CD3-201ENST00000313663 MRC2Q9UBG0 1479 aa12.33□□□□□ -0.44
C2CD3-201ENST00000313663 GAPVD1Q14C86 1478 aa12.3□□□□□ -0.44
C2CD3-201ENST00000313663 EIF5BO60841 1220 aaKnown RBP12.29□□□□□ -0.44
C2CD3-201ENST00000313663 NPM1P06748 294 aaKnown RBP eCLIP12.29□□□□□ -0.44
C2CD3-201ENST00000313663 ERCC6Q03468 1493 aa12.29□□□□□ -0.44
C2CD3-201ENST00000313663 ARAP1Q96P48 1450 aa12.28□□□□□ -0.44
C2CD3-201ENST00000313663 ARHGAP35Q9NRY4 1499 aa12.27□□□□□ -0.44
C2CD3-201ENST00000313663 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.45
C2CD3-201ENST00000313663 ZNF777Q9ULD5 760 aaPredicted RBP12.27□□□□□ -0.45
C2CD3-201ENST00000313663 ARID3CA6NKF2 412 aa12.26□□□□□ -0.45
C2CD3-201ENST00000313663 CUL7Q14999 1698 aa12.26□□□□□ -0.45
C2CD3-201ENST00000313663 ABCA5Q8WWZ7 1642 aa12.23□□□□□ -0.45
C2CD3-201ENST00000313663 WDR97A6NE52 1622 aa12.23□□□□□ -0.45
C2CD3-201ENST00000313663 P3H3Q8IVL6 736 aa12.23□□□□□ -0.45
C2CD3-201ENST00000313663 CHGAP10645 457 aaKnown RBP12.22□□□□□ -0.45
C2CD3-201ENST00000313663 IFT140Q96RY7 1462 aa12.21□□□□□ -0.45
C2CD3-201ENST00000313663 TARBP1Q13395 1621 aaKnown RBP12.21□□□□□ -0.45
C2CD3-201ENST00000313663 AQRO60306 1485 aaKnown RBP eCLIP12.21□□□□□ -0.46
C2CD3-201ENST00000313663 WDR62O43379 1518 aa12.2□□□□□ -0.46
C2CD3-201ENST00000313663 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
C2CD3-201ENST00000313663 GRIN2BQ13224 1484 aa12.18□□□□□ -0.46
C2CD3-201ENST00000313663 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
C2CD3-201ENST00000313663 KANK4Q5T7N3 995 aaPredicted RBP12.16□□□□□ -0.46
C2CD3-201ENST00000313663 EFCAB5A4FU69 1503 aa12.16□□□□□ -0.46
C2CD3-201ENST00000313663 FHOD3Q2V2M9 1422 aa12.15□□□□□ -0.46
C2CD3-201ENST00000313663 ZNF608Q9ULD9 1512 aaPredicted RBP12.14□□□□□ -0.47
C2CD3-201ENST00000313663 FMN1Q68DA7 1419 aa12.12□□□□□ -0.47
C2CD3-201ENST00000313663 NPM2Q86SE8 214 aaKnown RBP12.1□□□□□ -0.47
C2CD3-201ENST00000313663 CTTNBP2Q8WZ74 1663 aa12.1□□□□□ -0.47
C2CD3-201ENST00000313663 ADAMTS12P58397 1594 aa12.09□□□□□ -0.47
C2CD3-201ENST00000313663 THOC2Q8NI27 1593 aaKnown RBP12.09□□□□□ -0.47
C2CD3-201ENST00000313663 MAP3K1Q13233 1512 aa12.09□□□□□ -0.47
C2CD3-201ENST00000313663 PBRM1Q86U86 1689 aa12.08□□□□□ -0.48
C2CD3-201ENST00000313663 HSP90AA1P07900 732 aaKnown RBP12.08□□□□□ -0.48
C2CD3-201ENST00000313663 CASKIN1Q8WXD9 1431 aa12.07□□□□□ -0.48
C2CD3-201ENST00000313663 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
C2CD3-201ENST00000313663 TIAM1Q13009 1591 aa12.07□□□□□ -0.48
C2CD3-201ENST00000313663 SNAPC4Q5SXM2 1469 aa12.07□□□□□ -0.48
C2CD3-201ENST00000313663 FYCO1Q9BQS8 1478 aa12.06□□□□□ -0.48
C2CD3-201ENST00000313663 ANP32AP39687 249 aaKnown RBP12.06□□□□□ -0.48
C2CD3-201ENST00000313663 PCF11O94913 1555 aaKnown RBP12.05□□□□□ -0.48
C2CD3-201ENST00000313663 EIF4G3O43432 1585 aaKnown RBP12.05□□□□□ -0.48
C2CD3-201ENST00000313663 LRRC9Q6ZRR7 1453 aa12.04□□□□□ -0.48
C2CD3-201ENST00000313663 CCNB3Q8WWL7 1395 aa12.04□□□□□ -0.48
C2CD3-201ENST00000313663 TSPY4P0CV99 314 aa12.04□□□□□ -0.48
C2CD3-201ENST00000313663 TSPY10P0CW01 314 aa12.04□□□□□ -0.48
C2CD3-201ENST00000313663 ANP32BQ92688 251 aaKnown RBP12.04□□□□□ -0.48
C2CD3-201ENST00000313663 UPF2Q9HAU5 1272 aaKnown RBP12.03□□□□□ -0.48
C2CD3-201ENST00000313663 IQGAP2Q13576 1575 aa12.03□□□□□ -0.48
C2CD3-201ENST00000313663 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
C2CD3-201ENST00000313663 RRBP1Q9P2E9 1410 aaKnown RBP12.03□□□□□ -0.48
C2CD3-201ENST00000313663 SAMD9Q5K651 1589 aa12.02□□□□□ -0.48
C2CD3-201ENST00000313663 TONSLQ96HA7 1378 aa12.02□□□□□ -0.49
C2CD3-201ENST00000313663 GRIN2AQ12879 1464 aa12.02□□□□□ -0.49
C2CD3-201ENST00000313663 GTF3C3Q9Y5Q9 886 aa12.02□□□□□ -0.49
C2CD3-201ENST00000313663 KIAA0586Q9BVV6 1533 aa12.01□□□□□ -0.49
C2CD3-201ENST00000313663 A0A0G2JS52 829 aa12.01□□□□□ -0.49
C2CD3-201ENST00000313663 MTUS2Q5JR59 1369 aa12.01□□□□□ -0.49
C2CD3-201ENST00000313663 SCAF1Q9H7N4 1312 aaKnown RBP12□□□□□ -0.49
C2CD3-201ENST00000313663 SYNJ2O15056 1496 aa11.99□□□□□ -0.49
C2CD3-201ENST00000313663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.99□□□□□ -0.49
C2CD3-201ENST00000313663 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
C2CD3-201ENST00000313663 PHLDB1Q86UU1 1377 aa11.97□□□□□ -0.49
C2CD3-201ENST00000313663 CFAP43Q8NDM7 1665 aa11.96□□□□□ -0.5
C2CD3-201ENST00000313663 UGGT2Q9NYU1 1516 aa11.96□□□□□ -0.5
C2CD3-201ENST00000313663 TMC1Q8TDI8 760 aa11.94□□□□□ -0.5
C2CD3-201ENST00000313663 C14orf37Q86TY3 774 aa11.92□□□□□ -0.5
C2CD3-201ENST00000313663 CCDC18Q5T9S5 1454 aa11.92□□□□□ -0.5
C2CD3-201ENST00000313663 HNRNPUQ00839 825 aaKnown RBP eCLIP11.92□□□□□ -0.5
C2CD3-201ENST00000313663 JPH4Q96JJ6 628 aa11.91□□□□□ -0.5
C2CD3-201ENST00000313663 PPP1R15AO75807 674 aaPredicted RBP11.91□□□□□ -0.5
C2CD3-201ENST00000313663 CARMIL2Q6F5E8 1435 aa11.91□□□□□ -0.5
C2CD3-201ENST00000313663 SALL2Q9Y467 1007 aaPredicted RBP11.91□□□□□ -0.5
C2CD3-201ENST00000313663 WDR43Q15061 677 aaKnown RBP eCLIP11.91□□□□□ -0.5
C2CD3-201ENST00000313663 CHIC2Q9UKJ5 165 aa11.91□□□□□ -0.5
C2CD3-201ENST00000313663 NUP160Q12769 1436 aa11.9□□□□□ -0.5
C2CD3-201ENST00000313663 FAM9BQ8IZU0 186 aa11.9□□□□□ -0.5
C2CD3-201ENST00000313663 HECW1Q76N89 1606 aa11.9□□□□□ -0.51
C2CD3-201ENST00000313663 DISP1Q96F81 1524 aa11.89□□□□□ -0.51
C2CD3-201ENST00000313663 CDK11BP21127 795 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms