RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 NISCHQ9Y2I1 1504 aa17.55■□□□□ 0.4
C2CD3-201ENST00000313663 DCAF8L2P0C7V8 631 aa15.53■□□□□ 0.08
C2CD3-201ENST00000313663 CCDC180Q9P1Z9 1646 aa15.12■□□□□ 0.01
C2CD3-201ENST00000313663 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
C2CD3-201ENST00000313663 SHROOM4Q9ULL8 1493 aa14.59□□□□□ -0.07
C2CD3-201ENST00000313663 SUPT5HO00267 1087 aaKnown RBP14.47□□□□□ -0.09
C2CD3-201ENST00000313663 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.09
C2CD3-201ENST00000313663 ABCC9O60706 1549 aa14.32□□□□□ -0.12
C2CD3-201ENST00000313663 MYO15BQ96JP2 1530 aa14.23□□□□□ -0.13
C2CD3-201ENST00000313663 NACADO15069 1562 aa14.11□□□□□ -0.15
C2CD3-201ENST00000313663 APLP2Q06481 763 aa14.11□□□□□ -0.15
C2CD3-201ENST00000313663 FAM9AQ8IZU1 332 aaPredicted RBP14.1□□□□□ -0.15
C2CD3-201ENST00000313663 PELP1Q8IZL8 1130 aaKnown RBP14.08□□□□□ -0.16
C2CD3-201ENST00000313663 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
C2CD3-201ENST00000313663 SCRIBQ14160 1630 aa14.03□□□□□ -0.16
C2CD3-201ENST00000313663 RB1CC1Q8TDY2 1594 aa13.97□□□□□ -0.17
C2CD3-201ENST00000313663 RSF1Q96T23 1441 aaPredicted RBP13.72□□□□□ -0.21
C2CD3-201ENST00000313663 CECR2Q9BXF3 1484 aa13.66□□□□□ -0.22
C2CD3-201ENST00000313663 MYT1Q01538 1121 aa13.62□□□□□ -0.23
C2CD3-201ENST00000313663 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
C2CD3-201ENST00000313663 CHIC1Q5VXU3 224 aa13.59□□□□□ -0.23
C2CD3-201ENST00000313663 TTBK1Q5TCY1 1321 aaPredicted RBP13.58□□□□□ -0.23
C2CD3-201ENST00000313663 MROH2BQ7Z745 1585 aa13.57□□□□□ -0.24
C2CD3-201ENST00000313663 ATP1B4Q9UN42 357 aaPredicted RBP13.56□□□□□ -0.24
C2CD3-201ENST00000313663 BAZ1AQ9NRL2 1556 aaPredicted RBP13.55□□□□□ -0.24
C2CD3-201ENST00000313663 RANGAP1P46060 587 aaPredicted RBP13.54□□□□□ -0.24
C2CD3-201ENST00000313663 UNC13AQ9UPW8 1703 aa13.53□□□□□ -0.24
C2CD3-201ENST00000313663 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
C2CD3-201ENST00000313663 BICRAQ9NZM4 1560 aa13.49□□□□□ -0.25
C2CD3-201ENST00000313663 CCER1Q8TC90 406 aaPredicted RBP13.47□□□□□ -0.25
C2CD3-201ENST00000313663 WIZO95785 1651 aa13.43□□□□□ -0.26
C2CD3-201ENST00000313663 SMARCA4P51532 1647 aa13.42□□□□□ -0.26
C2CD3-201ENST00000313663 ERICH6Q7L0X2 663 aa13.41□□□□□ -0.26
C2CD3-201ENST00000313663 TRIM41Q8WV44 630 aa13.41□□□□□ -0.26
C2CD3-201ENST00000313663 UBTFP17480 764 aaKnown RBP13.39□□□□□ -0.27
C2CD3-201ENST00000313663 CENPBP07199 599 aaPredicted RBP13.37□□□□□ -0.27
C2CD3-201ENST00000313663 TOP2AP11388 1531 aaKnown RBP13.31□□□□□ -0.28
C2CD3-201ENST00000313663 ZEB1P37275 1124 aaPredicted RBP13.29□□□□□ -0.28
C2CD3-201ENST00000313663 NEFLP07196 543 aa13.26□□□□□ -0.29
C2CD3-201ENST00000313663 MYT1LQ9UL68 1186 aa13.23□□□□□ -0.29
C2CD3-201ENST00000313663 CCDC88BA6NC98 1476 aa13.22□□□□□ -0.29
C2CD3-201ENST00000313663 PEG3Q9GZU2 1588 aa13.22□□□□□ -0.29
C2CD3-201ENST00000313663 ATAD2BQ9ULI0 1458 aa13.21□□□□□ -0.29
C2CD3-201ENST00000313663 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
C2CD3-201ENST00000313663 BAZ1BQ9UIG0 1483 aaKnown RBP13.18□□□□□ -0.3
C2CD3-201ENST00000313663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
C2CD3-201ENST00000313663 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
C2CD3-201ENST00000313663 EIF4G1Q04637 1599 aaKnown RBP13.12□□□□□ -0.31
C2CD3-201ENST00000313663 LOC105371045A0A1W2PR82 267 aa13.1□□□□□ -0.31
C2CD3-201ENST00000313663 NCAPD3P42695 1498 aa13.06□□□□□ -0.32
C2CD3-201ENST00000313663 HMGXB3Q12766 1538 aa13.02□□□□□ -0.32
C2CD3-201ENST00000313663 ABCC8Q09428 1581 aa13□□□□□ -0.33
C2CD3-201ENST00000313663 POLR3GLQ9BT43 218 aa13□□□□□ -0.33
C2CD3-201ENST00000313663 YTHDC1Q96MU7 727 aaKnown RBP12.97□□□□□ -0.33
C2CD3-201ENST00000313663 DAXXQ9UER7 740 aaPredicted RBP12.96□□□□□ -0.33
C2CD3-201ENST00000313663 ITGAEP38570 1179 aa12.96□□□□□ -0.33
C2CD3-201ENST00000313663 WRNQ14191 1432 aaPredicted RBP eCLIP12.95□□□□□ -0.34
C2CD3-201ENST00000313663 PPARGC1BQ86YN6 1023 aaKnown RBP12.91□□□□□ -0.34
C2CD3-201ENST00000313663 CC2D2AQ9P2K1 1620 aa12.87□□□□□ -0.35
C2CD3-201ENST00000313663 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
C2CD3-201ENST00000313663 EEA1Q15075 1411 aa12.85□□□□□ -0.35
C2CD3-201ENST00000313663 SOGA1O94964 1423 aa12.83□□□□□ -0.36
C2CD3-201ENST00000313663 CFTRP13569 1480 aa12.82□□□□□ -0.36
C2CD3-201ENST00000313663 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
C2CD3-201ENST00000313663 CNGB1Q14028 1251 aaPredicted RBP12.81□□□□□ -0.36
C2CD3-201ENST00000313663 SYNJ1O43426 1573 aa12.8□□□□□ -0.36
C2CD3-201ENST00000313663 CADPSQ9ULU8 1353 aa12.79□□□□□ -0.36
C2CD3-201ENST00000313663 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
C2CD3-201ENST00000313663 RUSC2Q8N2Y8 1516 aa12.74□□□□□ -0.37
C2CD3-201ENST00000313663 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
C2CD3-201ENST00000313663 CLSPNQ9HAW4 1339 aa12.71□□□□□ -0.37
C2CD3-201ENST00000313663 GOLGA3Q08378 1498 aa12.68□□□□□ -0.38
C2CD3-201ENST00000313663 TNIKQ9UKE5 1360 aa12.68□□□□□ -0.38
C2CD3-201ENST00000313663 CUX1P39880 1505 aa12.66□□□□□ -0.38
C2CD3-201ENST00000313663 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
C2CD3-201ENST00000313663 BIVM-ERCC5R4GMW8 1640 aa12.66□□□□□ -0.38
C2CD3-201ENST00000313663 CEP162Q5TB80 1403 aa12.63□□□□□ -0.39
C2CD3-201ENST00000313663 FANCD2Q9BXW9 1451 aa12.63□□□□□ -0.39
C2CD3-201ENST00000313663 KIF27Q86VH2 1401 aa12.62□□□□□ -0.39
C2CD3-201ENST00000313663 TRIM52Q96A61 297 aa12.6□□□□□ -0.39
C2CD3-201ENST00000313663 HRCP23327 699 aa12.6□□□□□ -0.39
C2CD3-201ENST00000313663 PRDM2Q13029 1718 aa12.59□□□□□ -0.39
C2CD3-201ENST00000313663 NESP48681 1621 aa12.59□□□□□ -0.39
C2CD3-201ENST00000313663 FAM50AQ14320 339 aaKnown RBP12.59□□□□□ -0.39
C2CD3-201ENST00000313663 KIF21BO75037 1637 aa12.58□□□□□ -0.4
C2CD3-201ENST00000313663 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
C2CD3-201ENST00000313663 ZNF316A6NFI3 1004 aaPredicted RBP12.57□□□□□ -0.4
C2CD3-201ENST00000313663 ZBTB47Q9UFB7 747 aaPredicted RBP12.57□□□□□ -0.4
C2CD3-201ENST00000313663 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
C2CD3-201ENST00000313663 FBLN2P98095 1184 aa12.55□□□□□ -0.4
C2CD3-201ENST00000313663 RAPGEF2Q9Y4G8 1499 aa12.55□□□□□ -0.4
C2CD3-201ENST00000313663 PDS5BQ9NTI5 1447 aa12.55□□□□□ -0.4
C2CD3-201ENST00000313663 FGD5Q6ZNL6 1462 aa12.55□□□□□ -0.4
C2CD3-201ENST00000313663 CUX2O14529 1486 aa12.54□□□□□ -0.4
C2CD3-201ENST00000313663 RTL5Q5HYW3 569 aaPredicted RBP12.53□□□□□ -0.4
C2CD3-201ENST00000313663 CLIP1P30622 1438 aa12.52□□□□□ -0.41
C2CD3-201ENST00000313663 PRXQ9BXM0 1461 aa12.52□□□□□ -0.41
C2CD3-201ENST00000313663 DNMBPQ6XZF7 1577 aa12.5□□□□□ -0.41
C2CD3-201ENST00000313663 ERICH3Q5RHP9 1530 aa12.49□□□□□ -0.41
C2CD3-201ENST00000313663 TOPBP1Q92547 1522 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms