RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 MAP3K1Q13233 1512 aa34.63■■■■□ 3.13
CTSF-201ENST00000310325 FHAD1B1AJZ9 1412 aa34.6■■■■□ 3.13
CTSF-201ENST00000310325 TIAM1Q13009 1591 aa34.59■■■■□ 3.13
CTSF-201ENST00000310325 PBRM1Q86U86 1689 aa34.53■■■■□ 3.12
CTSF-201ENST00000310325 PCF11O94913 1555 aaKnown RBP34.53■■■■□ 3.12
CTSF-201ENST00000310325 RRBP1Q9P2E9 1410 aaKnown RBP34.52■■■■□ 3.12
CTSF-201ENST00000310325 CFAP43Q8NDM7 1665 aa34.49■■■■□ 3.11
CTSF-201ENST00000310325 FHOD3Q2V2M9 1422 aa34.48■■■■□ 3.11
CTSF-201ENST00000310325 WDR62O43379 1518 aa34.45■■■■□ 3.11
CTSF-201ENST00000310325 P3H3Q8IVL6 736 aa34.44■■■■□ 3.1
CTSF-201ENST00000310325 FYCO1Q9BQS8 1478 aa34.41■■■■□ 3.1
CTSF-201ENST00000310325 AQRO60306 1485 aaKnown RBP eCLIP34.41■■■■□ 3.1
CTSF-201ENST00000310325 LRRC9Q6ZRR7 1453 aa34.41■■■■□ 3.1
CTSF-201ENST00000310325 SAMD9Q5K651 1589 aa34.4■■■■□ 3.1
CTSF-201ENST00000310325 CASKIN1Q8WXD9 1431 aa34.36■■■■□ 3.09
CTSF-201ENST00000310325 IFT140Q96RY7 1462 aa34.35■■■■□ 3.09
CTSF-201ENST00000310325 CCNB3Q8WWL7 1395 aa34.35■■■■□ 3.09
CTSF-201ENST00000310325 ADAMTS12P58397 1594 aa34.35■■■■□ 3.09
CTSF-201ENST00000310325 FMN1Q68DA7 1419 aa34.33■■■■□ 3.09
CTSF-201ENST00000310325 GRIN2BQ13224 1484 aa34.3■■■■□ 3.08
CTSF-201ENST00000310325 SNAPC4Q5SXM2 1469 aa34.25■■■■□ 3.07
CTSF-201ENST00000310325 ERCC6Q03468 1493 aa34.23■■■■□ 3.07
CTSF-201ENST00000310325 ZNF608Q9ULD9 1512 aaPredicted RBP34.21■■■■□ 3.07
CTSF-201ENST00000310325 ATP1B4Q9UN42 357 aaPredicted RBP34.2■■■■□ 3.07
CTSF-201ENST00000310325 THOC2Q8NI27 1593 aaKnown RBP34.19■■■■□ 3.06
CTSF-201ENST00000310325 IQGAP2Q13576 1575 aa34.17■■■■□ 3.06
CTSF-201ENST00000310325 PHLDB1Q86UU1 1377 aa34.16■■■■□ 3.06
CTSF-201ENST00000310325 EIF4G3O43432 1585 aaKnown RBP34.12■■■■□ 3.05
CTSF-201ENST00000310325 LRRIQ1Q96JM4 1722 aa34.1■■■■□ 3.05
CTSF-201ENST00000310325 DHX57Q6P158 1386 aaKnown RBP34.07■■■■□ 3.04
CTSF-201ENST00000310325 CLSPNQ9HAW4 1339 aa34.05■■■■□ 3.04
CTSF-201ENST00000310325 ITGAEP38570 1179 aa33.99■■■■□ 3.03
CTSF-201ENST00000310325 UGGT2Q9NYU1 1516 aa33.97■■■■□ 3.03
CTSF-201ENST00000310325 MTUS2Q5JR59 1369 aa33.94■■■■□ 3.02
CTSF-201ENST00000310325 GRIN2AQ12879 1464 aa33.92■■■■□ 3.02
CTSF-201ENST00000310325 HECW1Q76N89 1606 aa33.92■■■■□ 3.02
CTSF-201ENST00000310325 KIAA0586Q9BVV6 1533 aa33.91■■■■□ 3.02
CTSF-201ENST00000310325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.91■■■■□ 3.02
CTSF-201ENST00000310325 MAGI1Q96QZ7 1491 aaPredicted RBP33.91■■■■□ 3.02
CTSF-201ENST00000310325 CCDC18Q5T9S5 1454 aa33.9■■■■□ 3.02
CTSF-201ENST00000310325 FAM50AQ14320 339 aaKnown RBP33.9■■■■□ 3.02
CTSF-201ENST00000310325 EHBP1L1Q8N3D4 1523 aa33.9■■■■□ 3.02
CTSF-201ENST00000310325 SUPT6HQ7KZ85 1726 aaKnown RBP33.87■■■■□ 3.01
CTSF-201ENST00000310325 RAB3GAP2Q9H2M9 1393 aa33.86■■■■□ 3.01
CTSF-201ENST00000310325 FGD6Q6ZV73 1430 aa33.85■■■■□ 3.01
CTSF-201ENST00000310325 SETD5Q9C0A6 1442 aa33.84■■■■□ 3.01
CTSF-201ENST00000310325 KIAA0556O60303 1618 aa33.82■■■■□ 3
CTSF-201ENST00000310325 ZNF316A6NFI3 1004 aaPredicted RBP33.81■■■■□ 3
CTSF-201ENST00000310325 NCOA2Q15596 1464 aa33.81■■■■□ 3
CTSF-201ENST00000310325 SYNJ2O15056 1496 aa33.79■■■■□ 3
CTSF-201ENST00000310325 DISP1Q96F81 1524 aa33.77■■■■□ 3
CTSF-201ENST00000310325 MAGI3Q5TCQ9 1506 aa33.76■■■■□ 3
CTSF-201ENST00000310325 EPRSP07814 1512 aaKnown RBP33.76■■■□□ 2.99
CTSF-201ENST00000310325 DIEXFQ68CQ4 756 aaKnown RBP33.75■■■□□ 2.99
CTSF-201ENST00000310325 MYOM3Q5VTT5 1437 aa33.74■■■□□ 2.99
CTSF-201ENST00000310325 ARHGEF11O15085 1522 aa33.73■■■□□ 2.99
CTSF-201ENST00000310325 CEP170Q5SW79 1584 aa33.72■■■□□ 2.99
CTSF-201ENST00000310325 CHMP7Q8WUX9 453 aaPredicted RBP33.68■■■□□ 2.98
CTSF-201ENST00000310325 CDK13Q14004 1512 aaKnown RBP33.66■■■□□ 2.98
CTSF-201ENST00000310325 MAPKBP1O60336 1514 aa33.65■■■□□ 2.98
CTSF-201ENST00000310325 PTPN23Q9H3S7 1636 aa33.61■■■□□ 2.97
CTSF-201ENST00000310325 NUP160Q12769 1436 aa33.6■■■□□ 2.97
CTSF-201ENST00000310325 RAPGEF6Q8TEU7 1601 aa33.6■■■□□ 2.97
CTSF-201ENST00000310325 FBLN2P98095 1184 aa33.53■■■□□ 2.96
CTSF-201ENST00000310325 NUP153P49790 1475 aaKnown RBP33.53■■■□□ 2.96
CTSF-201ENST00000310325 TCOF1Q13428 1488 aaKnown RBP33.52■■■□□ 2.96
CTSF-201ENST00000310325 PTPRKQ15262 1439 aa33.52■■■□□ 2.96
CTSF-201ENST00000310325 HFM1A2PYH4 1435 aa33.5■■■□□ 2.95
CTSF-201ENST00000310325 CARMIL2Q6F5E8 1435 aa33.45■■■□□ 2.95
CTSF-201ENST00000310325 MIA2Q96PC5 1412 aa33.45■■■□□ 2.94
CTSF-201ENST00000310325 ARID3CA6NKF2 412 aa33.43■■■□□ 2.94
CTSF-201ENST00000310325 JPH4Q96JJ6 628 aa33.39■■■□□ 2.94
CTSF-201ENST00000310325 NAIPQ13075 1403 aa33.38■■■□□ 2.93
CTSF-201ENST00000310325 PLB1Q6P1J6 1458 aa33.35■■■□□ 2.93
CTSF-201ENST00000310325 CDK11AQ9UQ88 783 aaPredicted RBP33.33■■■□□ 2.93
CTSF-201ENST00000310325 GCC2Q8IWJ2 1684 aa33.33■■■□□ 2.93
CTSF-201ENST00000310325 UACAQ9BZF9 1416 aa33.31■■■□□ 2.92
CTSF-201ENST00000310325 AKNAQ7Z591 1439 aa33.28■■■□□ 2.92
CTSF-201ENST00000310325 TROQ12816 1431 aaPredicted RBP33.26■■■□□ 2.91
CTSF-201ENST00000310325 CHD1O14646 1710 aa33.25■■■□□ 2.91
CTSF-201ENST00000310325 ADCY10Q96PN6 1610 aa33.24■■■□□ 2.91
CTSF-201ENST00000310325 ABCA8O94911 1581 aa33.23■■■□□ 2.91
CTSF-201ENST00000310325 SIN3AQ96ST3 1273 aa33.23■■■□□ 2.91
CTSF-201ENST00000310325 TIMELESSQ9UNS1 1208 aa33.21■■■□□ 2.91
CTSF-201ENST00000310325 PRG4Q92954 1404 aaPredicted RBP33.2■■■□□ 2.91
CTSF-201ENST00000310325 ITSN2Q9NZM3 1697 aa33.19■■■□□ 2.9
CTSF-201ENST00000310325 DNMT1P26358 1616 aaKnown RBP33.18■■■□□ 2.9
CTSF-201ENST00000310325 NEUROD1Q13562 356 aa33.18■■■□□ 2.9
CTSF-201ENST00000310325 CHIC2Q9UKJ5 165 aa33.16■■■□□ 2.9
CTSF-201ENST00000310325 RRP7BPQ9NSQ0 103 aa33.14■■■□□ 2.9
CTSF-201ENST00000310325 DAPK1P53355 1430 aa33.14■■■□□ 2.9
CTSF-201ENST00000310325 KIF14Q15058 1648 aa33.13■■■□□ 2.89
CTSF-201ENST00000310325 MIER1Q8N108 512 aa33.09■■■□□ 2.89
CTSF-201ENST00000310325 KDM6BO15054 1643 aa33.08■■■□□ 2.89
CTSF-201ENST00000310325 ROCK1Q13464 1354 aa33.07■■■□□ 2.89
CTSF-201ENST00000310325 ABCC5O15440 1437 aa33.06■■■□□ 2.88
CTSF-201ENST00000310325 GPATCH8Q9UKJ3 1502 aaKnown RBP33.05■■■□□ 2.88
CTSF-201ENST00000310325 SHROOM2Q13796 1616 aa33.05■■■□□ 2.88
CTSF-201ENST00000310325 ATP10BO94823 1461 aa33.04■■■□□ 2.88
CTSF-201ENST00000310325 CAMSAP2Q08AD1 1489 aa33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms