RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 JPH4Q96JJ6 628 aa34.21■■■■□ 3.07
PDZRN3-202ENST00000308537 CARMIL1Q5VZK9 1371 aa34.21■■■■□ 3.07
PDZRN3-202ENST00000308537 KIAA0586Q9BVV6 1533 aa34.2■■■■□ 3.06
PDZRN3-202ENST00000308537 TRHP20396 242 aaPredicted RBP34.01■■■■□ 3.03
PDZRN3-202ENST00000308537 RAPGEF2Q9Y4G8 1499 aa33.96■■■■□ 3.03
PDZRN3-202ENST00000308537 IQGAP2Q13576 1575 aa33.93■■■■□ 3.02
PDZRN3-202ENST00000308537 ADCY10Q96PN6 1610 aa33.86■■■■□ 3.01
PDZRN3-202ENST00000308537 PRXQ9BXM0 1461 aa33.83■■■■□ 3.01
PDZRN3-202ENST00000308537 DISP1Q96F81 1524 aa33.8■■■■□ 3
PDZRN3-202ENST00000308537 UGGT2Q9NYU1 1516 aa33.79■■■■□ 3
PDZRN3-202ENST00000308537 KIF13AQ9H1H9 1805 aa33.74■■■□□ 2.99
PDZRN3-202ENST00000308537 CTTNBP2Q8WZ74 1663 aa33.73■■■□□ 2.99
PDZRN3-202ENST00000308537 CARMIL2Q6F5E8 1435 aa33.72■■■□□ 2.99
PDZRN3-202ENST00000308537 TNIKQ9UKE5 1360 aa33.72■■■□□ 2.99
PDZRN3-202ENST00000308537 PTPRGP23470 1445 aa33.71■■■□□ 2.99
PDZRN3-202ENST00000308537 MAPKBP1O60336 1514 aa33.7■■■□□ 2.99
PDZRN3-202ENST00000308537 KIAA0556O60303 1618 aa33.65■■■□□ 2.98
PDZRN3-202ENST00000308537 ABCC10Q5T3U5 1492 aa33.59■■■□□ 2.97
PDZRN3-202ENST00000308537 UHRF1BP1LA0JNW5 1464 aa33.56■■■□□ 2.96
PDZRN3-202ENST00000308537 DIP2BQ9P265 1576 aa33.56■■■□□ 2.96
PDZRN3-202ENST00000308537 CSRNP3Q8WYN3 585 aa33.55■■■□□ 2.96
PDZRN3-202ENST00000308537 ABCC2Q92887 1545 aa33.54■■■□□ 2.96
PDZRN3-202ENST00000308537 EEA1Q15075 1411 aa33.52■■■□□ 2.96
PDZRN3-202ENST00000308537 TTBK1Q5TCY1 1321 aaPredicted RBP33.52■■■□□ 2.96
PDZRN3-202ENST00000308537 NPM1P06748 294 aaKnown RBP eCLIP33.51■■■□□ 2.95
PDZRN3-202ENST00000308537 UACAQ9BZF9 1416 aa33.51■■■□□ 2.95
PDZRN3-202ENST00000308537 GOLGA3Q08378 1498 aa33.43■■■□□ 2.94
PDZRN3-202ENST00000308537 KDM5BQ9UGL1 1544 aa33.43■■■□□ 2.94
PDZRN3-202ENST00000308537 CHIC1Q5VXU3 224 aa33.42■■■□□ 2.94
PDZRN3-202ENST00000308537 FAM69CQ0P6D2 419 aa33.41■■■□□ 2.94
PDZRN3-202ENST00000308537 PLB1Q6P1J6 1458 aa33.36■■■□□ 2.93
PDZRN3-202ENST00000308537 ASXL2Q76L83 1435 aa33.36■■■□□ 2.93
PDZRN3-202ENST00000308537 ABCA8O94911 1581 aa33.34■■■□□ 2.93
PDZRN3-202ENST00000308537 ZCCHC11Q5TAX3 1644 aaKnown RBP33.34■■■□□ 2.93
PDZRN3-202ENST00000308537 SAMD9Q5K651 1589 aa33.32■■■□□ 2.92
PDZRN3-202ENST00000308537 KIF21BO75037 1637 aa33.31■■■□□ 2.92
PDZRN3-202ENST00000308537 FAM9AQ8IZU1 332 aaPredicted RBP33.28■■■□□ 2.92
PDZRN3-202ENST00000308537 GLI2P10070 1586 aa33.27■■■□□ 2.92
PDZRN3-202ENST00000308537 TSPOAP1O95153 1857 aa33.23■■■□□ 2.91
PDZRN3-202ENST00000308537 PPRC1Q5VV67 1664 aaKnown RBP33.21■■■□□ 2.91
PDZRN3-202ENST00000308537 EPRSP07814 1512 aaKnown RBP33.19■■■□□ 2.9
PDZRN3-202ENST00000308537 P3H3Q8IVL6 736 aa33.14■■■□□ 2.9
PDZRN3-202ENST00000308537 MAP3K4Q9Y6R4 1608 aa33.12■■■□□ 2.89
PDZRN3-202ENST00000308537 WDR7Q9Y4E6 1490 aa33.12■■■□□ 2.89
PDZRN3-202ENST00000308537 KDM6BO15054 1643 aa33.06■■■□□ 2.88
PDZRN3-202ENST00000308537 ATP10BO94823 1461 aa33.03■■■□□ 2.88
PDZRN3-202ENST00000308537 FHOD3Q2V2M9 1422 aa33.02■■■□□ 2.88
PDZRN3-202ENST00000308537 RAPGEF6Q8TEU7 1601 aa33.02■■■□□ 2.88
PDZRN3-202ENST00000308537 EFCAB5A4FU69 1503 aa32.99■■■□□ 2.87
PDZRN3-202ENST00000308537 NUP153P49790 1475 aaKnown RBP32.94■■■□□ 2.86
PDZRN3-202ENST00000308537 RANGAP1P46060 587 aaPredicted RBP32.93■■■□□ 2.86
PDZRN3-202ENST00000308537 COL17A1Q9UMD9 1497 aaPredicted RBP32.93■■■□□ 2.86
PDZRN3-202ENST00000308537 CFAP43Q8NDM7 1665 aa32.91■■■□□ 2.86
PDZRN3-202ENST00000308537 ARID3CA6NKF2 412 aa32.88■■■□□ 2.85
PDZRN3-202ENST00000308537 TEX14Q8IWB6 1497 aa32.86■■■□□ 2.85
PDZRN3-202ENST00000308537 MAGI3Q5TCQ9 1506 aa32.85■■■□□ 2.85
PDZRN3-202ENST00000308537 EHMT2Q96KQ7 1210 aa32.84■■■□□ 2.85
PDZRN3-202ENST00000308537 ARHGAP35Q9NRY4 1499 aa32.83■■■□□ 2.85
PDZRN3-202ENST00000308537 UBTFP17480 764 aaKnown RBP32.82■■■□□ 2.84
PDZRN3-202ENST00000308537 KCNH8Q96L42 1107 aa32.82■■■□□ 2.84
PDZRN3-202ENST00000308537 CD109Q6YHK3 1445 aa32.81■■■□□ 2.84
PDZRN3-202ENST00000308537 ABCA9Q8IUA7 1624 aa32.79■■■□□ 2.84
PDZRN3-202ENST00000308537 CDK13Q14004 1512 aaKnown RBP32.65■■■□□ 2.82
PDZRN3-202ENST00000308537 FMN1Q68DA7 1419 aa32.63■■■□□ 2.81
PDZRN3-202ENST00000308537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.6■■■□□ 2.81
PDZRN3-202ENST00000308537 HNRNPUL2Q1KMD3 747 aaKnown RBP32.6■■■□□ 2.81
PDZRN3-202ENST00000308537 ARAP3Q8WWN8 1544 aa32.58■■■□□ 2.81
PDZRN3-202ENST00000308537 HECW1Q76N89 1606 aa32.58■■■□□ 2.81
PDZRN3-202ENST00000308537 KDM4FA0A1W2PPD8 638 aa32.56■■■□□ 2.8
PDZRN3-202ENST00000308537 AEBP2Q6ZN18 517 aaPredicted RBP32.56■■■□□ 2.8
PDZRN3-202ENST00000308537 LRRIQ1Q96JM4 1722 aa32.56■■■□□ 2.8
PDZRN3-202ENST00000308537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.54■■■□□ 2.8
PDZRN3-202ENST00000308537 PLEKHD1A6NEE1 506 aa32.53■■■□□ 2.8
PDZRN3-202ENST00000308537 TTC37Q6PGP7 1564 aa32.51■■■□□ 2.79
PDZRN3-202ENST00000308537 NEO1Q92859 1461 aa32.5■■■□□ 2.79
PDZRN3-202ENST00000308537 PHLDB1Q86UU1 1377 aa32.47■■■□□ 2.79
PDZRN3-202ENST00000308537 PCF11O94913 1555 aaKnown RBP32.45■■■□□ 2.78
PDZRN3-202ENST00000308537 FRMPD1Q5SYB0 1578 aa32.43■■■□□ 2.78
PDZRN3-202ENST00000308537 CASKIN1Q8WXD9 1431 aa32.4■■■□□ 2.78
PDZRN3-202ENST00000308537 ADGRL1O94910 1474 aa32.39■■■□□ 2.78
PDZRN3-202ENST00000308537 CLIP1P30622 1438 aa32.38■■■□□ 2.77
PDZRN3-202ENST00000308537 KIF14Q15058 1648 aa32.37■■■□□ 2.77
PDZRN3-202ENST00000308537 ATP1B4Q9UN42 357 aaPredicted RBP32.34■■■□□ 2.77
PDZRN3-202ENST00000308537 FANCAO15360 1455 aa32.34■■■□□ 2.77
PDZRN3-202ENST00000308537 TROQ12816 1431 aaPredicted RBP32.33■■■□□ 2.77
PDZRN3-202ENST00000308537 RICTORQ6R327 1708 aa32.32■■■□□ 2.76
PDZRN3-202ENST00000308537 RAPGEF3O95398 923 aa32.32■■■□□ 2.76
PDZRN3-202ENST00000308537 CFAP74Q9C0B2 1584 aa32.32■■■□□ 2.76
PDZRN3-202ENST00000308537 AKNAQ7Z591 1439 aa32.31■■■□□ 2.76
PDZRN3-202ENST00000308537 PLCH2O75038 1416 aa32.3■■■□□ 2.76
PDZRN3-202ENST00000308537 FYCO1Q9BQS8 1478 aa32.29■■■□□ 2.76
PDZRN3-202ENST00000308537 CCDC18Q5T9S5 1454 aa32.27■■■□□ 2.76
PDZRN3-202ENST00000308537 MYO5CQ9NQX4 1742 aa32.26■■■□□ 2.75
PDZRN3-202ENST00000308537 CDK11AQ9UQ88 783 aaPredicted RBP32.24■■■□□ 2.75
PDZRN3-202ENST00000308537 DENND4BO75064 1496 aaPredicted RBP32.23■■■□□ 2.75
PDZRN3-202ENST00000308537 ZMYM4Q5VZL5 1548 aa32.19■■■□□ 2.74
PDZRN3-202ENST00000308537 CEP162Q5TB80 1403 aa32.16■■■□□ 2.74
PDZRN3-202ENST00000308537 ARHGEF40Q8TER5 1519 aa32.16■■■□□ 2.74
PDZRN3-202ENST00000308537 CDC42BPBQ9Y5S2 1711 aa32.14■■■□□ 2.74
PDZRN3-202ENST00000308537 POGZQ7Z3K3 1410 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms