RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 CLIP1P30622 1438 aa16.88■□□□□ 0.29
CASP3-201ENST00000308394 FHAD1B1AJZ9 1412 aa16.86■□□□□ 0.29
CASP3-201ENST00000308394 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
CASP3-201ENST00000308394 ADAMTS12P58397 1594 aa16.82■□□□□ 0.28
CASP3-201ENST00000308394 FBLN2P98095 1184 aa16.8■□□□□ 0.28
CASP3-201ENST00000308394 CHMP7Q8WUX9 453 aaPredicted RBP16.79■□□□□ 0.28
CASP3-201ENST00000308394 MAGI1Q96QZ7 1491 aaPredicted RBP16.78■□□□□ 0.28
CASP3-201ENST00000308394 CTTNBP2Q8WZ74 1663 aa16.74■□□□□ 0.27
CASP3-201ENST00000308394 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
CASP3-201ENST00000308394 ARHGAP35Q9NRY4 1499 aa16.72■□□□□ 0.27
CASP3-201ENST00000308394 GRIN2AQ12879 1464 aa16.72■□□□□ 0.27
CASP3-201ENST00000308394 P3H3Q8IVL6 736 aa16.72■□□□□ 0.27
CASP3-201ENST00000308394 PPARGC1BQ86YN6 1023 aaKnown RBP16.71■□□□□ 0.27
CASP3-201ENST00000308394 VPS8Q8N3P4 1428 aa16.7■□□□□ 0.26
CASP3-201ENST00000308394 ARAP1Q96P48 1450 aa16.69■□□□□ 0.26
CASP3-201ENST00000308394 IQGAP2Q13576 1575 aa16.63■□□□□ 0.25
CASP3-201ENST00000308394 KIAA0586Q9BVV6 1533 aa16.62■□□□□ 0.25
CASP3-201ENST00000308394 EFCAB5A4FU69 1503 aa16.62■□□□□ 0.25
CASP3-201ENST00000308394 FHOD3Q2V2M9 1422 aa16.62■□□□□ 0.25
CASP3-201ENST00000308394 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
CASP3-201ENST00000308394 NUP160Q12769 1436 aa16.58■□□□□ 0.24
CASP3-201ENST00000308394 PCGF6Q9BYE7 350 aa16.57■□□□□ 0.24
CASP3-201ENST00000308394 ATP1B4Q9UN42 357 aaPredicted RBP16.56■□□□□ 0.24
CASP3-201ENST00000308394 TRIM26Q12899 539 aaPredicted RBP16.56■□□□□ 0.24
CASP3-201ENST00000308394 SAMD9Q5K651 1589 aa16.56■□□□□ 0.24
CASP3-201ENST00000308394 CHD1O14646 1710 aa16.55■□□□□ 0.24
CASP3-201ENST00000308394 JPH4Q96JJ6 628 aa16.54■□□□□ 0.24
CASP3-201ENST00000308394 UGGT2Q9NYU1 1516 aa16.53■□□□□ 0.24
CASP3-201ENST00000308394 FMN1Q68DA7 1419 aa16.52■□□□□ 0.23
CASP3-201ENST00000308394 DISP1Q96F81 1524 aa16.48■□□□□ 0.23
CASP3-201ENST00000308394 PCF11O94913 1555 aaKnown RBP16.46■□□□□ 0.23
CASP3-201ENST00000308394 KIAA0556O60303 1618 aa16.46■□□□□ 0.23
CASP3-201ENST00000308394 CARMIL2Q6F5E8 1435 aa16.45■□□□□ 0.22
CASP3-201ENST00000308394 CASKIN1Q8WXD9 1431 aa16.45■□□□□ 0.22
CASP3-201ENST00000308394 KANK4Q5T7N3 995 aaPredicted RBP16.45■□□□□ 0.22
CASP3-201ENST00000308394 FYCO1Q9BQS8 1478 aa16.44■□□□□ 0.22
CASP3-201ENST00000308394 PRG4Q92954 1404 aaPredicted RBP16.41■□□□□ 0.22
CASP3-201ENST00000308394 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
CASP3-201ENST00000308394 TIAM1Q13009 1591 aa16.39■□□□□ 0.21
CASP3-201ENST00000308394 MAP3K1Q13233 1512 aa16.37■□□□□ 0.21
CASP3-201ENST00000308394 ARID3CA6NKF2 412 aa16.36■□□□□ 0.21
CASP3-201ENST00000308394 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
CASP3-201ENST00000308394 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
CASP3-201ENST00000308394 CLASP1Q7Z460 1538 aa16.35■□□□□ 0.21
CASP3-201ENST00000308394 LRRC9Q6ZRR7 1453 aa16.34■□□□□ 0.21
CASP3-201ENST00000308394 SHROOM2Q13796 1616 aa16.33■□□□□ 0.2
CASP3-201ENST00000308394 HECW1Q76N89 1606 aa16.32■□□□□ 0.2
CASP3-201ENST00000308394 CFAP43Q8NDM7 1665 aa16.32■□□□□ 0.2
CASP3-201ENST00000308394 EIF5BO60841 1220 aaKnown RBP16.32■□□□□ 0.2
CASP3-201ENST00000308394 PTPRGP23470 1445 aa16.31■□□□□ 0.2
CASP3-201ENST00000308394 PLB1Q6P1J6 1458 aa16.31■□□□□ 0.2
CASP3-201ENST00000308394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
CASP3-201ENST00000308394 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
CASP3-201ENST00000308394 MTUS2Q5JR59 1369 aa16.29■□□□□ 0.2
CASP3-201ENST00000308394 CCDC18Q5T9S5 1454 aa16.29■□□□□ 0.2
CASP3-201ENST00000308394 EPRSP07814 1512 aaKnown RBP16.29■□□□□ 0.2
CASP3-201ENST00000308394 RAPGEF6Q8TEU7 1601 aa16.29■□□□□ 0.2
CASP3-201ENST00000308394 LRRIQ1Q96JM4 1722 aa16.29■□□□□ 0.2
CASP3-201ENST00000308394 ERCC6L2Q5T890 1561 aa16.28■□□□□ 0.2
CASP3-201ENST00000308394 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
CASP3-201ENST00000308394 CDK13Q14004 1512 aaKnown RBP16.27■□□□□ 0.19
CASP3-201ENST00000308394 NUP153P49790 1475 aaKnown RBP16.27■□□□□ 0.19
CASP3-201ENST00000308394 RTN4Q9NQC3 1192 aaKnown RBP16.24■□□□□ 0.19
CASP3-201ENST00000308394 CDK11AQ9UQ88 783 aaPredicted RBP16.22■□□□□ 0.19
CASP3-201ENST00000308394 ABCA8O94911 1581 aa16.22■□□□□ 0.19
CASP3-201ENST00000308394 PHLDB1Q86UU1 1377 aa16.2■□□□□ 0.18
CASP3-201ENST00000308394 MAGI3Q5TCQ9 1506 aa16.2■□□□□ 0.18
CASP3-201ENST00000308394 UACAQ9BZF9 1416 aa16.19■□□□□ 0.18
CASP3-201ENST00000308394 EHBP1L1Q8N3D4 1523 aa16.19■□□□□ 0.18
CASP3-201ENST00000308394 RRBP1Q9P2E9 1410 aaKnown RBP16.16■□□□□ 0.18
CASP3-201ENST00000308394 CCNB3Q8WWL7 1395 aa16.16■□□□□ 0.18
CASP3-201ENST00000308394 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
CASP3-201ENST00000308394 ATP10BO94823 1461 aa16.15■□□□□ 0.18
CASP3-201ENST00000308394 SUPT6HQ7KZ85 1726 aaKnown RBP16.15■□□□□ 0.18
CASP3-201ENST00000308394 PLEKHD1A6NEE1 506 aa16.14■□□□□ 0.17
CASP3-201ENST00000308394 FAM50AQ14320 339 aaKnown RBP16.13■□□□□ 0.17
CASP3-201ENST00000308394 ITGAEP38570 1179 aa16.12■□□□□ 0.17
CASP3-201ENST00000308394 ABCC2Q92887 1545 aa16.12■□□□□ 0.17
CASP3-201ENST00000308394 TROQ12816 1431 aaPredicted RBP16.1■□□□□ 0.17
CASP3-201ENST00000308394 MYOM3Q5VTT5 1437 aa16.09■□□□□ 0.17
CASP3-201ENST00000308394 FGD6Q6ZV73 1430 aa16.08■□□□□ 0.16
CASP3-201ENST00000308394 ARHGEF11O15085 1522 aa16.07■□□□□ 0.16
CASP3-201ENST00000308394 UHRF1BP1LA0JNW5 1464 aa16.06■□□□□ 0.16
CASP3-201ENST00000308394 KIF14Q15058 1648 aa16.02■□□□□ 0.15
CASP3-201ENST00000308394 KDM5BQ9UGL1 1544 aa16.01■□□□□ 0.15
CASP3-201ENST00000308394 KCNH8Q96L42 1107 aa16.01■□□□□ 0.15
CASP3-201ENST00000308394 ADCY10Q96PN6 1610 aa16.01■□□□□ 0.15
CASP3-201ENST00000308394 ZCCHC11Q5TAX3 1644 aaKnown RBP16■□□□□ 0.15
CASP3-201ENST00000308394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16■□□□□ 0.15
CASP3-201ENST00000308394 MIA2Q96PC5 1412 aa15.99■□□□□ 0.15
CASP3-201ENST00000308394 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15
CASP3-201ENST00000308394 CFDP1Q9UEE9 299 aaPredicted RBP15.99■□□□□ 0.15
CASP3-201ENST00000308394 PTPN23Q9H3S7 1636 aa15.98■□□□□ 0.15
CASP3-201ENST00000308394 PLEKHG5O94827 1062 aa15.98■□□□□ 0.15
CASP3-201ENST00000308394 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
CASP3-201ENST00000308394 ZNF777Q9ULD5 760 aaPredicted RBP15.97■□□□□ 0.15
CASP3-201ENST00000308394 GPATCH8Q9UKJ3 1502 aaKnown RBP15.96■□□□□ 0.15
CASP3-201ENST00000308394 CCER1Q8TC90 406 aaPredicted RBP15.96■□□□□ 0.15
CASP3-201ENST00000308394 ZNF644Q9H582 1327 aaPredicted RBP15.95■□□□□ 0.14
CASP3-201ENST00000308394 ABCC10Q5T3U5 1492 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms