RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 PBRM1Q86U86 1689 aa30.5■■■□□ 2.47
SSH3-202ENST00000308298 FHAD1B1AJZ9 1412 aa30.49■■■□□ 2.47
SSH3-202ENST00000308298 TIAM1Q13009 1591 aa30.48■■■□□ 2.47
SSH3-202ENST00000308298 HNRNPUL2Q1KMD3 747 aaKnown RBP30.46■■■□□ 2.47
SSH3-202ENST00000308298 WDR62O43379 1518 aa30.44■■■□□ 2.46
SSH3-202ENST00000308298 PCF11O94913 1555 aaKnown RBP30.43■■■□□ 2.46
SSH3-202ENST00000308298 CFAP43Q8NDM7 1665 aa30.4■■■□□ 2.46
SSH3-202ENST00000308298 FHOD3Q2V2M9 1422 aa30.39■■■□□ 2.46
SSH3-202ENST00000308298 RRBP1Q9P2E9 1410 aaKnown RBP30.38■■■□□ 2.45
SSH3-202ENST00000308298 P3H3Q8IVL6 736 aa30.35■■■□□ 2.45
SSH3-202ENST00000308298 IFT140Q96RY7 1462 aa30.35■■■□□ 2.45
SSH3-202ENST00000308298 SAMD9Q5K651 1589 aa30.34■■■□□ 2.45
SSH3-202ENST00000308298 FYCO1Q9BQS8 1478 aa30.33■■■□□ 2.45
SSH3-202ENST00000308298 ADAMTS12P58397 1594 aa30.33■■■□□ 2.45
SSH3-202ENST00000308298 AQRO60306 1485 aaKnown RBP eCLIP30.33■■■□□ 2.45
SSH3-202ENST00000308298 LRRC9Q6ZRR7 1453 aa30.3■■■□□ 2.44
SSH3-202ENST00000308298 GRIN2BQ13224 1484 aa30.29■■■□□ 2.44
SSH3-202ENST00000308298 CASKIN1Q8WXD9 1431 aa30.28■■■□□ 2.44
SSH3-202ENST00000308298 ERCC6Q03468 1493 aa30.27■■■□□ 2.44
SSH3-202ENST00000308298 FMN1Q68DA7 1419 aa30.26■■■□□ 2.44
SSH3-202ENST00000308298 CCNB3Q8WWL7 1395 aa30.24■■■□□ 2.43
SSH3-202ENST00000308298 THOC2Q8NI27 1593 aaKnown RBP30.23■■■□□ 2.43
SSH3-202ENST00000308298 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
SSH3-202ENST00000308298 SNAPC4Q5SXM2 1469 aa30.18■■■□□ 2.42
SSH3-202ENST00000308298 IQGAP2Q13576 1575 aa30.15■■■□□ 2.42
SSH3-202ENST00000308298 EIF4G3O43432 1585 aaKnown RBP30.14■■■□□ 2.42
SSH3-202ENST00000308298 ATP1B4Q9UN42 357 aaPredicted RBP30.13■■■□□ 2.41
SSH3-202ENST00000308298 PHLDB1Q86UU1 1377 aa30.08■■■□□ 2.41
SSH3-202ENST00000308298 LRRIQ1Q96JM4 1722 aa30.07■■■□□ 2.4
SSH3-202ENST00000308298 UGGT2Q9NYU1 1516 aa29.98■■■□□ 2.39
SSH3-202ENST00000308298 GRIN2AQ12879 1464 aa29.96■■■□□ 2.39
SSH3-202ENST00000308298 DHX57Q6P158 1386 aaKnown RBP29.95■■■□□ 2.38
SSH3-202ENST00000308298 MAGI1Q96QZ7 1491 aaPredicted RBP29.95■■■□□ 2.38
SSH3-202ENST00000308298 CLSPNQ9HAW4 1339 aa29.94■■■□□ 2.38
SSH3-202ENST00000308298 KIAA0586Q9BVV6 1533 aa29.93■■■□□ 2.38
SSH3-202ENST00000308298 HECW1Q76N89 1606 aa29.91■■■□□ 2.38
SSH3-202ENST00000308298 MTUS2Q5JR59 1369 aa29.91■■■□□ 2.38
SSH3-202ENST00000308298 ITGAEP38570 1179 aa29.91■■■□□ 2.38
SSH3-202ENST00000308298 CCDC18Q5T9S5 1454 aa29.89■■■□□ 2.38
SSH3-202ENST00000308298 EHBP1L1Q8N3D4 1523 aa29.87■■■□□ 2.37
SSH3-202ENST00000308298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.86■■■□□ 2.37
SSH3-202ENST00000308298 SUPT6HQ7KZ85 1726 aaKnown RBP29.85■■■□□ 2.37
SSH3-202ENST00000308298 FAM50AQ14320 339 aaKnown RBP29.84■■■□□ 2.37
SSH3-202ENST00000308298 SYNJ2O15056 1496 aa29.84■■■□□ 2.37
SSH3-202ENST00000308298 KIAA0556O60303 1618 aa29.84■■■□□ 2.37
SSH3-202ENST00000308298 FGD6Q6ZV73 1430 aa29.81■■■□□ 2.36
SSH3-202ENST00000308298 DISP1Q96F81 1524 aa29.79■■■□□ 2.36
SSH3-202ENST00000308298 RAB3GAP2Q9H2M9 1393 aa29.79■■■□□ 2.36
SSH3-202ENST00000308298 NCOA2Q15596 1464 aa29.79■■■□□ 2.36
SSH3-202ENST00000308298 SETD5Q9C0A6 1442 aa29.77■■■□□ 2.36
SSH3-202ENST00000308298 CEP170Q5SW79 1584 aa29.77■■■□□ 2.36
SSH3-202ENST00000308298 EPRSP07814 1512 aaKnown RBP29.76■■■□□ 2.36
SSH3-202ENST00000308298 MAGI3Q5TCQ9 1506 aa29.76■■■□□ 2.35
SSH3-202ENST00000308298 CHMP7Q8WUX9 453 aaPredicted RBP29.74■■■□□ 2.35
SSH3-202ENST00000308298 ARHGEF11O15085 1522 aa29.73■■■□□ 2.35
SSH3-202ENST00000308298 MYOM3Q5VTT5 1437 aa29.72■■■□□ 2.35
SSH3-202ENST00000308298 ZNF316A6NFI3 1004 aaPredicted RBP29.68■■■□□ 2.34
SSH3-202ENST00000308298 CDK13Q14004 1512 aaKnown RBP29.68■■■□□ 2.34
SSH3-202ENST00000308298 NUP160Q12769 1436 aa29.67■■■□□ 2.34
SSH3-202ENST00000308298 RAPGEF6Q8TEU7 1601 aa29.65■■■□□ 2.34
SSH3-202ENST00000308298 PTPN23Q9H3S7 1636 aa29.62■■■□□ 2.33
SSH3-202ENST00000308298 DIEXFQ68CQ4 756 aaKnown RBP29.61■■■□□ 2.33
SSH3-202ENST00000308298 FBLN2P98095 1184 aa29.61■■■□□ 2.33
SSH3-202ENST00000308298 MAPKBP1O60336 1514 aa29.59■■■□□ 2.33
SSH3-202ENST00000308298 NUP153P49790 1475 aaKnown RBP29.57■■■□□ 2.32
SSH3-202ENST00000308298 TCOF1Q13428 1488 aaKnown RBP29.54■■■□□ 2.32
SSH3-202ENST00000308298 CARMIL2Q6F5E8 1435 aa29.53■■■□□ 2.32
SSH3-202ENST00000308298 PTPRKQ15262 1439 aa29.51■■■□□ 2.31
SSH3-202ENST00000308298 HFM1A2PYH4 1435 aa29.49■■■□□ 2.31
SSH3-202ENST00000308298 ARID3CA6NKF2 412 aa29.48■■■□□ 2.31
SSH3-202ENST00000308298 JPH4Q96JJ6 628 aa29.48■■■□□ 2.31
SSH3-202ENST00000308298 MIA2Q96PC5 1412 aa29.47■■■□□ 2.31
SSH3-202ENST00000308298 PLB1Q6P1J6 1458 aa29.42■■■□□ 2.3
SSH3-202ENST00000308298 CHD1O14646 1710 aa29.39■■■□□ 2.3
SSH3-202ENST00000308298 CDK11AQ9UQ88 783 aaPredicted RBP29.39■■■□□ 2.3
SSH3-202ENST00000308298 NAIPQ13075 1403 aa29.39■■■□□ 2.3
SSH3-202ENST00000308298 GCC2Q8IWJ2 1684 aa29.36■■■□□ 2.29
SSH3-202ENST00000308298 TROQ12816 1431 aaPredicted RBP29.33■■■□□ 2.29
SSH3-202ENST00000308298 ABCA8O94911 1581 aa29.33■■■□□ 2.29
SSH3-202ENST00000308298 ADCY10Q96PN6 1610 aa29.32■■■□□ 2.28
SSH3-202ENST00000308298 AKNAQ7Z591 1439 aa29.32■■■□□ 2.28
SSH3-202ENST00000308298 UACAQ9BZF9 1416 aa29.32■■■□□ 2.28
SSH3-202ENST00000308298 ITSN2Q9NZM3 1697 aa29.28■■■□□ 2.28
SSH3-202ENST00000308298 PRG4Q92954 1404 aaPredicted RBP29.28■■■□□ 2.28
SSH3-202ENST00000308298 DNMT1P26358 1616 aaKnown RBP29.25■■■□□ 2.27
SSH3-202ENST00000308298 KIF14Q15058 1648 aa29.23■■■□□ 2.27
SSH3-202ENST00000308298 SIN3AQ96ST3 1273 aa29.22■■■□□ 2.27
SSH3-202ENST00000308298 TIMELESSQ9UNS1 1208 aa29.21■■■□□ 2.27
SSH3-202ENST00000308298 SHROOM2Q13796 1616 aa29.2■■■□□ 2.27
SSH3-202ENST00000308298 CHIC2Q9UKJ5 165 aa29.2■■■□□ 2.26
SSH3-202ENST00000308298 DAPK1P53355 1430 aa29.19■■■□□ 2.26
SSH3-202ENST00000308298 RRP7BPQ9NSQ0 103 aa29.18■■■□□ 2.26
SSH3-202ENST00000308298 NEUROD1Q13562 356 aa29.18■■■□□ 2.26
SSH3-202ENST00000308298 ATP10BO94823 1461 aa29.16■■■□□ 2.26
SSH3-202ENST00000308298 GPATCH8Q9UKJ3 1502 aaKnown RBP29.14■■■□□ 2.26
SSH3-202ENST00000308298 KDM6BO15054 1643 aa29.14■■■□□ 2.26
SSH3-202ENST00000308298 ABCC5O15440 1437 aa29.14■■■□□ 2.25
SSH3-202ENST00000308298 PTPRGP23470 1445 aa29.14■■■□□ 2.25
SSH3-202ENST00000308298 ROCK1Q13464 1354 aa29.13■■■□□ 2.25
SSH3-202ENST00000308298 CAMSAP2Q08AD1 1489 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms