RNA–Protein interactions for RNA: ENST00000307486.12

C2orf54-201, Transcript of Uncharacterized protein C2orf54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C2orf54, Length 2,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf54-201ENST00000307486 GAPVD1Q14C86 1478 aa29.54■■■□□ 2.32
C2orf54-201ENST00000307486 EFCAB5A4FU69 1503 aa29.53■■■□□ 2.32
C2orf54-201ENST00000307486 PCF11O94913 1555 aaKnown RBP29.47■■■□□ 2.31
C2orf54-201ENST00000307486 TARBP1Q13395 1621 aaKnown RBP29.47■■■□□ 2.31
C2orf54-201ENST00000307486 P3H3Q8IVL6 736 aa29.47■■■□□ 2.31
C2orf54-201ENST00000307486 FHOD3Q2V2M9 1422 aa29.45■■■□□ 2.3
C2orf54-201ENST00000307486 CCNB3Q8WWL7 1395 aa29.44■■■□□ 2.3
C2orf54-201ENST00000307486 LRRC9Q6ZRR7 1453 aa29.42■■■□□ 2.3
C2orf54-201ENST00000307486 CFAP43Q8NDM7 1665 aa29.42■■■□□ 2.3
C2orf54-201ENST00000307486 MRC2Q9UBG0 1479 aa29.38■■■□□ 2.29
C2orf54-201ENST00000307486 FYCO1Q9BQS8 1478 aa29.37■■■□□ 2.29
C2orf54-201ENST00000307486 AQRO60306 1485 aaKnown RBP eCLIP29.35■■■□□ 2.29
C2orf54-201ENST00000307486 CASKIN1Q8WXD9 1431 aa29.33■■■□□ 2.29
C2orf54-201ENST00000307486 ATP1B4Q9UN42 357 aaPredicted RBP29.3■■■□□ 2.28
C2orf54-201ENST00000307486 PBRM1Q86U86 1689 aa29.3■■■□□ 2.28
C2orf54-201ENST00000307486 FMN1Q68DA7 1419 aa29.29■■■□□ 2.28
C2orf54-201ENST00000307486 SAMD9Q5K651 1589 aa29.29■■■□□ 2.28
C2orf54-201ENST00000307486 DHX57Q6P158 1386 aaKnown RBP29.26■■■□□ 2.27
C2orf54-201ENST00000307486 CLSPNQ9HAW4 1339 aa29.25■■■□□ 2.27
C2orf54-201ENST00000307486 PHLDB1Q86UU1 1377 aa29.24■■■□□ 2.27
C2orf54-201ENST00000307486 DIEXFQ68CQ4 756 aaKnown RBP29.21■■■□□ 2.27
C2orf54-201ENST00000307486 SNAPC4Q5SXM2 1469 aa29.21■■■□□ 2.27
C2orf54-201ENST00000307486 ITGAEP38570 1179 aa29.21■■■□□ 2.27
C2orf54-201ENST00000307486 ZNF316A6NFI3 1004 aaPredicted RBP29.2■■■□□ 2.26
C2orf54-201ENST00000307486 WDR62O43379 1518 aa29.17■■■□□ 2.26
C2orf54-201ENST00000307486 ADAMTS12P58397 1594 aa29.17■■■□□ 2.26
C2orf54-201ENST00000307486 GRIN2BQ13224 1484 aa29.14■■■□□ 2.26
C2orf54-201ENST00000307486 IFT140Q96RY7 1462 aa29.14■■■□□ 2.26
C2orf54-201ENST00000307486 FAM50AQ14320 339 aaKnown RBP29.08■■■□□ 2.25
C2orf54-201ENST00000307486 IQGAP2Q13576 1575 aa29.07■■■□□ 2.24
C2orf54-201ENST00000307486 THOC2Q8NI27 1593 aaKnown RBP29.07■■■□□ 2.24
C2orf54-201ENST00000307486 LRRIQ1Q96JM4 1722 aa29.06■■■□□ 2.24
C2orf54-201ENST00000307486 ZNF608Q9ULD9 1512 aaPredicted RBP29.06■■■□□ 2.24
C2orf54-201ENST00000307486 RAB3GAP2Q9H2M9 1393 aa29.05■■■□□ 2.24
C2orf54-201ENST00000307486 MTUS2Q5JR59 1369 aa29.02■■■□□ 2.24
C2orf54-201ENST00000307486 ERCC6Q03468 1493 aa29.01■■■□□ 2.24
C2orf54-201ENST00000307486 SETD5Q9C0A6 1442 aa29.01■■■□□ 2.23
C2orf54-201ENST00000307486 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.99■■■□□ 2.23
C2orf54-201ENST00000307486 FGD6Q6ZV73 1430 aa28.95■■■□□ 2.22
C2orf54-201ENST00000307486 EIF4G3O43432 1585 aaKnown RBP28.94■■■□□ 2.22
C2orf54-201ENST00000307486 EHBP1L1Q8N3D4 1523 aa28.92■■■□□ 2.22
C2orf54-201ENST00000307486 CCDC18Q5T9S5 1454 aa28.91■■■□□ 2.22
C2orf54-201ENST00000307486 HECW1Q76N89 1606 aa28.9■■■□□ 2.22
C2orf54-201ENST00000307486 SUPT6HQ7KZ85 1726 aaKnown RBP28.9■■■□□ 2.22
C2orf54-201ENST00000307486 UGGT2Q9NYU1 1516 aa28.89■■■□□ 2.22
C2orf54-201ENST00000307486 NCOA2Q15596 1464 aa28.88■■■□□ 2.21
C2orf54-201ENST00000307486 MAPKBP1O60336 1514 aa28.86■■■□□ 2.21
C2orf54-201ENST00000307486 KIAA0586Q9BVV6 1533 aa28.84■■■□□ 2.21
C2orf54-201ENST00000307486 MYOM3Q5VTT5 1437 aa28.83■■■□□ 2.21
C2orf54-201ENST00000307486 GRIN2AQ12879 1464 aa28.82■■■□□ 2.2
C2orf54-201ENST00000307486 MAGI3Q5TCQ9 1506 aa28.81■■■□□ 2.2
C2orf54-201ENST00000307486 EPRSP07814 1512 aaKnown RBP28.78■■■□□ 2.2
C2orf54-201ENST00000307486 ARHGEF11O15085 1522 aa28.77■■■□□ 2.2
C2orf54-201ENST00000307486 MAGI1Q96QZ7 1491 aaPredicted RBP28.77■■■□□ 2.2
C2orf54-201ENST00000307486 KIAA0556O60303 1618 aa28.76■■■□□ 2.19
C2orf54-201ENST00000307486 DISP1Q96F81 1524 aa28.73■■■□□ 2.19
C2orf54-201ENST00000307486 PTPN23Q9H3S7 1636 aa28.71■■■□□ 2.19
C2orf54-201ENST00000307486 CDK13Q14004 1512 aaKnown RBP28.71■■■□□ 2.19
C2orf54-201ENST00000307486 SYNJ2O15056 1496 aa28.69■■■□□ 2.18
C2orf54-201ENST00000307486 PTPRKQ15262 1439 aa28.69■■■□□ 2.18
C2orf54-201ENST00000307486 HFM1A2PYH4 1435 aa28.67■■■□□ 2.18
C2orf54-201ENST00000307486 CHMP7Q8WUX9 453 aaPredicted RBP28.65■■■□□ 2.18
C2orf54-201ENST00000307486 CEP170Q5SW79 1584 aa28.64■■■□□ 2.17
C2orf54-201ENST00000307486 TCOF1Q13428 1488 aaKnown RBP28.62■■■□□ 2.17
C2orf54-201ENST00000307486 MIER1Q8N108 512 aa28.62■■■□□ 2.17
C2orf54-201ENST00000307486 ARID3CA6NKF2 412 aa28.6■■■□□ 2.17
C2orf54-201ENST00000307486 CENPBP07199 599 aaPredicted RBP28.6■■■□□ 2.17
C2orf54-201ENST00000307486 ACIN1Q9UKV3 1341 aaKnown RBP28.6■■■□□ 2.17
C2orf54-201ENST00000307486 RAPGEF6Q8TEU7 1601 aa28.59■■■□□ 2.17
C2orf54-201ENST00000307486 SCAF1Q9H7N4 1312 aaKnown RBP28.57■■■□□ 2.16
C2orf54-201ENST00000307486 NAIPQ13075 1403 aa28.57■■■□□ 2.16
C2orf54-201ENST00000307486 SIN3AQ96ST3 1273 aa28.57■■■□□ 2.16
C2orf54-201ENST00000307486 NUP153P49790 1475 aaKnown RBP28.56■■■□□ 2.16
C2orf54-201ENST00000307486 FBLN2P98095 1184 aa28.56■■■□□ 2.16
C2orf54-201ENST00000307486 MIA2Q96PC5 1412 aa28.55■■■□□ 2.16
C2orf54-201ENST00000307486 NEUROD1Q13562 356 aa28.55■■■□□ 2.16
C2orf54-201ENST00000307486 UACAQ9BZF9 1416 aa28.53■■■□□ 2.16
C2orf54-201ENST00000307486 NUP160Q12769 1436 aa28.52■■■□□ 2.16
C2orf54-201ENST00000307486 TIMELESSQ9UNS1 1208 aa28.51■■■□□ 2.15
C2orf54-201ENST00000307486 CARMIL2Q6F5E8 1435 aa28.46■■■□□ 2.15
C2orf54-201ENST00000307486 GCC2Q8IWJ2 1684 aa28.45■■■□□ 2.15
C2orf54-201ENST00000307486 CDK11AQ9UQ88 783 aaPredicted RBP28.45■■■□□ 2.14
C2orf54-201ENST00000307486 AKNAQ7Z591 1439 aa28.43■■■□□ 2.14
C2orf54-201ENST00000307486 JPH4Q96JJ6 628 aa28.42■■■□□ 2.14
C2orf54-201ENST00000307486 CHIC2Q9UKJ5 165 aa28.42■■■□□ 2.14
C2orf54-201ENST00000307486 PLB1Q6P1J6 1458 aa28.4■■■□□ 2.14
C2orf54-201ENST00000307486 RRP7BPQ9NSQ0 103 aa28.4■■■□□ 2.14
C2orf54-201ENST00000307486 YTHDC1Q96MU7 727 aaKnown RBP28.38■■■□□ 2.13
C2orf54-201ENST00000307486 TROQ12816 1431 aaPredicted RBP28.35■■■□□ 2.13
C2orf54-201ENST00000307486 PRG4Q92954 1404 aaPredicted RBP28.33■■■□□ 2.12
C2orf54-201ENST00000307486 PPP1R15AO75807 674 aaPredicted RBP28.32■■■□□ 2.12
C2orf54-201ENST00000307486 TONSLQ96HA7 1378 aa28.32■■■□□ 2.12
C2orf54-201ENST00000307486 DAPK1P53355 1430 aa28.31■■■□□ 2.12
C2orf54-201ENST00000307486 DNMT1P26358 1616 aaKnown RBP28.31■■■□□ 2.12
C2orf54-201ENST00000307486 KDM6BO15054 1643 aa28.29■■■□□ 2.12
C2orf54-201ENST00000307486 ADCY10Q96PN6 1610 aa28.28■■■□□ 2.12
C2orf54-201ENST00000307486 ITSN2Q9NZM3 1697 aa28.27■■■□□ 2.12
C2orf54-201ENST00000307486 ROCK1Q13464 1354 aa28.26■■■□□ 2.11
C2orf54-201ENST00000307486 ABCC5O15440 1437 aa28.25■■■□□ 2.11
C2orf54-201ENST00000307486 ABCA8O94911 1581 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms