RNA–Protein interactions for RNA: ENST00000304527.8

SH3D19-201, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH3D19, Length 5,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-201ENST00000304527 ABCA10Q8WWZ4 1543 aa9.03□□□□□ -0.96
SH3D19-201ENST00000304527 POLA1P09884 1462 aaPredicted RBP9.03□□□□□ -0.96
SH3D19-201ENST00000304527 EIF5BO60841 1220 aaKnown RBP9.03□□□□□ -0.96
SH3D19-201ENST00000304527 RAD54L2Q9Y4B4 1467 aa9.02□□□□□ -0.96
SH3D19-201ENST00000304527 ITGAEP38570 1179 aa9.02□□□□□ -0.97
SH3D19-201ENST00000304527 P3H3Q8IVL6 736 aa9.02□□□□□ -0.97
SH3D19-201ENST00000304527 KANK4Q5T7N3 995 aaPredicted RBP9.02□□□□□ -0.97
SH3D19-201ENST00000304527 ZNF316A6NFI3 1004 aaPredicted RBP9.02□□□□□ -0.97
SH3D19-201ENST00000304527 CLSPNQ9HAW4 1339 aa9.01□□□□□ -0.97
SH3D19-201ENST00000304527 CCNB3Q8WWL7 1395 aa9.01□□□□□ -0.97
SH3D19-201ENST00000304527 ESF1Q9H501 851 aaKnown RBP9.01□□□□□ -0.97
SH3D19-201ENST00000304527 CENPBP07199 599 aaPredicted RBP9□□□□□ -0.97
SH3D19-201ENST00000304527 CHMP7Q8WUX9 453 aaPredicted RBP8.99□□□□□ -0.97
SH3D19-201ENST00000304527 CUL7Q14999 1698 aa8.98□□□□□ -0.97
SH3D19-201ENST00000304527 FAM50AQ14320 339 aaKnown RBP8.98□□□□□ -0.97
SH3D19-201ENST00000304527 TDRD9Q8NDG6 1382 aaKnown RBP8.98□□□□□ -0.97
SH3D19-201ENST00000304527 EFCAB5A4FU69 1503 aa8.97□□□□□ -0.97
SH3D19-201ENST00000304527 PODXL2Q9NZ53 605 aa8.97□□□□□ -0.97
SH3D19-201ENST00000304527 RRBP1Q9P2E9 1410 aaKnown RBP8.97□□□□□ -0.97
SH3D19-201ENST00000304527 FMN1Q68DA7 1419 aa8.97□□□□□ -0.97
SH3D19-201ENST00000304527 MAP3K1Q13233 1512 aa8.96□□□□□ -0.97
SH3D19-201ENST00000304527 GAPVD1Q14C86 1478 aa8.96□□□□□ -0.97
SH3D19-201ENST00000304527 HAP1P54257 671 aaPredicted RBP8.96□□□□□ -0.98
SH3D19-201ENST00000304527 URB2Q14146 1524 aaKnown RBP8.95□□□□□ -0.98
SH3D19-201ENST00000304527 FHOD3Q2V2M9 1422 aa8.95□□□□□ -0.98
SH3D19-201ENST00000304527 TIAM1Q13009 1591 aa8.94□□□□□ -0.98
SH3D19-201ENST00000304527 MTUS2Q5JR59 1369 aa8.93□□□□□ -0.98
SH3D19-201ENST00000304527 SLC4A1APQ9BWU0 796 aaKnown RBP8.93□□□□□ -0.98
SH3D19-201ENST00000304527 CDK11AQ9UQ88 783 aaPredicted RBP8.93□□□□□ -0.98
SH3D19-201ENST00000304527 LRRC9Q6ZRR7 1453 aa8.93□□□□□ -0.98
SH3D19-201ENST00000304527 FYCO1Q9BQS8 1478 aa8.92□□□□□ -0.98
SH3D19-201ENST00000304527 TPRNQ4KMQ1 711 aa8.92□□□□□ -0.98
SH3D19-201ENST00000304527 CASKIN1Q8WXD9 1431 aa8.92□□□□□ -0.98
SH3D19-201ENST00000304527 BCANQ96GW7 911 aa8.91□□□□□ -0.98
SH3D19-201ENST00000304527 POLR3GLQ9BT43 218 aa8.91□□□□□ -0.98
SH3D19-201ENST00000304527 AMER1Q5JTC6 1135 aaPredicted RBP8.91□□□□□ -0.98
SH3D19-201ENST00000304527 DHX57Q6P158 1386 aaKnown RBP8.9□□□□□ -0.98
SH3D19-201ENST00000304527 AQRO60306 1485 aaKnown RBP eCLIP8.9□□□□□ -0.984e-8■■■■□ 24.4
SH3D19-201ENST00000304527 MRC2Q9UBG0 1479 aa8.9□□□□□ -0.98
SH3D19-201ENST00000304527 PCF11O94913 1555 aaKnown RBP8.89□□□□□ -0.99
SH3D19-201ENST00000304527 SETD5Q9C0A6 1442 aa8.88□□□□□ -0.99
SH3D19-201ENST00000304527 CTTNBP2Q8WZ74 1663 aa8.88□□□□□ -0.99
SH3D19-201ENST00000304527 ABCA5Q8WWZ7 1642 aa8.87□□□□□ -0.99
SH3D19-201ENST00000304527 DNAJC5BQ9UF47 199 aa8.87□□□□□ -0.99
SH3D19-201ENST00000304527 RAB3GAP2Q9H2M9 1393 aa8.86□□□□□ -0.99
SH3D19-201ENST00000304527 PHLDB1Q86UU1 1377 aa8.86□□□□□ -0.99
SH3D19-201ENST00000304527 GRIN2BQ13224 1484 aa8.85□□□□□ -0.99
SH3D19-201ENST00000304527 KIF21AQ7Z4S6 1674 aa8.85□□□□□ -0.99
SH3D19-201ENST00000304527 CFAP43Q8NDM7 1665 aa8.85□□□□□ -0.99
SH3D19-201ENST00000304527 WDR97A6NE52 1622 aa8.85□□□□□ -0.99
SH3D19-201ENST00000304527 IFT140Q96RY7 1462 aa8.84□□□□□ -0.99
SH3D19-201ENST00000304527 OSCARQ8IYS5 282 aa8.84□□□□□ -0.99
SH3D19-201ENST00000304527 ACIN1Q9UKV3 1341 aaKnown RBP8.84□□□□□ -0.99
SH3D19-201ENST00000304527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.83□□□□□ -1
SH3D19-201ENST00000304527 CCDC18Q5T9S5 1454 aa8.82□□□□□ -1
SH3D19-201ENST00000304527 NCBP3Q53F19 620 aaKnown RBP8.82□□□□□ -1
SH3D19-201ENST00000304527 YTHDC1Q96MU7 727 aaKnown RBP8.82□□□□□ -1
SH3D19-201ENST00000304527 C14orf37Q86TY3 774 aa8.82□□□□□ -1
SH3D19-201ENST00000304527 FGD6Q6ZV73 1430 aa8.81□□□□□ -1
SH3D19-201ENST00000304527 NEUROD1Q13562 356 aa8.81□□□□□ -1
SH3D19-201ENST00000304527 CARMIL2Q6F5E8 1435 aa8.81□□□□□ -1
SH3D19-201ENST00000304527 THOC2Q8NI27 1593 aaKnown RBP8.81□□□□□ -1
SH3D19-201ENST00000304527 TRIM52Q96A61 297 aa8.81□□□□□ -1
SH3D19-201ENST00000304527 TARBP1Q13395 1621 aaKnown RBP8.8□□□□□ -1
SH3D19-201ENST00000304527 TIMELESSQ9UNS1 1208 aa8.8□□□□□ -1
SH3D19-201ENST00000304527 KCNA4P22459 653 aa8.8□□□□□ -1
SH3D19-201ENST00000304527 IQGAP2Q13576 1575 aa8.8□□□□□ -1
SH3D19-201ENST00000304527 EHBP1L1Q8N3D4 1523 aa8.79□□□□□ -1
SH3D19-201ENST00000304527 NEFLP07196 543 aa8.79□□□□□ -1
SH3D19-201ENST00000304527 STAG3Q9UJ98 1225 aa8.79□□□□□ -1
SH3D19-201ENST00000304527 SAMD9Q5K651 1589 aa8.79□□□□□ -1
SH3D19-201ENST00000304527 MYOM3Q5VTT5 1437 aa8.78□□□□□ -1
SH3D19-201ENST00000304527 SNAPC4Q5SXM2 1469 aa8.78□□□□□ -1
SH3D19-201ENST00000304527 ADAMTS12P58397 1594 aa8.78□□□□□ -1
SH3D19-201ENST00000304527 NCOA2Q15596 1464 aa8.78□□□□□ -1
SH3D19-201ENST00000304527 HECW1Q76N89 1606 aa8.78□□□□□ -1
SH3D19-201ENST00000304527 MIER1Q8N108 512 aa8.78□□□□□ -1
SH3D19-201ENST00000304527 ARID3CA6NKF2 412 aa8.77□□□□□ -1.01
SH3D19-201ENST00000304527 PBRM1Q86U86 1689 aa8.77□□□□□ -1.01
SH3D19-201ENST00000304527 TONSLQ96HA7 1378 aa8.77□□□□□ -1.01
SH3D19-201ENST00000304527 SUPT6HQ7KZ85 1726 aaKnown RBP8.76□□□□□ -1.01
SH3D19-201ENST00000304527 WDR62O43379 1518 aa8.76□□□□□ -1.01
SH3D19-201ENST00000304527 KIAA0586Q9BVV6 1533 aa8.75□□□□□ -1.01
SH3D19-201ENST00000304527 SCAF1Q9H7N4 1312 aaKnown RBP8.75□□□□□ -1.01
SH3D19-201ENST00000304527 ZNF608Q9ULD9 1512 aaPredicted RBP8.73□□□□□ -1.01
SH3D19-201ENST00000304527 SIN3AQ96ST3 1273 aa8.73□□□□□ -1.01
SH3D19-201ENST00000304527 EPRSP07814 1512 aaKnown RBP8.72□□□□□ -1.01
SH3D19-201ENST00000304527 CHIC2Q9UKJ5 165 aa8.72□□□□□ -1.01
SH3D19-201ENST00000304527 UGGT2Q9NYU1 1516 aa8.72□□□□□ -1.01
SH3D19-201ENST00000304527 MAGI1Q96QZ7 1491 aaPredicted RBP8.72□□□□□ -1.01
SH3D19-201ENST00000304527 HFM1A2PYH4 1435 aa8.72□□□□□ -1.01
SH3D19-201ENST00000304527 GRIN2AQ12879 1464 aa8.72□□□□□ -1.01
SH3D19-201ENST00000304527 GTF3C3Q9Y5Q9 886 aa8.72□□□□□ -1.01
SH3D19-201ENST00000304527 RRP7BPQ9NSQ0 103 aa8.71□□□□□ -1.01
SH3D19-201ENST00000304527 UACAQ9BZF9 1416 aa8.71□□□□□ -1.01
SH3D19-201ENST00000304527 ARID3AQ99856 593 aa8.71□□□□□ -1.01
SH3D19-201ENST00000304527 MIA2Q96PC5 1412 aa8.71□□□□□ -1.02
SH3D19-201ENST00000304527 NEFMP07197 916 aa8.71□□□□□ -1.02
SH3D19-201ENST00000304527 AEBP2Q6ZN18 517 aaPredicted RBP8.71□□□□□ -1.02
SH3D19-201ENST00000304527 ZNF777Q9ULD5 760 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms