RNA–Protein interactions for RNA: ENST00000304527.8

SH3D19-201, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH3D19, Length 5,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-201ENST00000304527 NISCHQ9Y2I1 1504 aa12.79□□□□□ -0.36
SH3D19-201ENST00000304527 DCAF8L2P0C7V8 631 aa11.05□□□□□ -0.64
SH3D19-201ENST00000304527 CCDC180Q9P1Z9 1646 aa10.96□□□□□ -0.66
SH3D19-201ENST00000304527 SHROOM4Q9ULL8 1493 aa10.82□□□□□ -0.68
SH3D19-201ENST00000304527 ZCCHC6Q5VYS8 1495 aaKnown RBP10.77□□□□□ -0.68
SH3D19-201ENST00000304527 SUPT5HO00267 1087 aaKnown RBP10.62□□□□□ -0.71
SH3D19-201ENST00000304527 DCAF1Q9Y4B6 1507 aa10.53□□□□□ -0.72
SH3D19-201ENST00000304527 EHMT2Q96KQ7 1210 aa10.41□□□□□ -0.74
SH3D19-201ENST00000304527 MYO15BQ96JP2 1530 aa10.29□□□□□ -0.76
SH3D19-201ENST00000304527 SLC24A1O60721 1099 aa10.28□□□□□ -0.76
SH3D19-201ENST00000304527 ABCC9O60706 1549 aa10.27□□□□□ -0.76
SH3D19-201ENST00000304527 SCRIBQ14160 1630 aa10.21□□□□□ -0.77
SH3D19-201ENST00000304527 NACADO15069 1562 aa10.21□□□□□ -0.77
SH3D19-201ENST00000304527 CHIC1Q5VXU3 224 aa10.2□□□□□ -0.78
SH3D19-201ENST00000304527 FAM9AQ8IZU1 332 aaPredicted RBP10.19□□□□□ -0.78
SH3D19-201ENST00000304527 RB1CC1Q8TDY2 1594 aa10.09□□□□□ -0.79
SH3D19-201ENST00000304527 RSF1Q96T23 1441 aaPredicted RBP10.05□□□□□ -0.8
SH3D19-201ENST00000304527 TRIM41Q8WV44 630 aa9.96□□□□□ -0.81
SH3D19-201ENST00000304527 CECR2Q9BXF3 1484 aa9.92□□□□□ -0.82
SH3D19-201ENST00000304527 BAZ1AQ9NRL2 1556 aaPredicted RBP9.89□□□□□ -0.83
SH3D19-201ENST00000304527 MROH2BQ7Z745 1585 aa9.88□□□□□ -0.83
SH3D19-201ENST00000304527 LOC105371045A0A1W2PR82 267 aa9.84□□□□□ -0.83
SH3D19-201ENST00000304527 APLP2Q06481 763 aa9.82□□□□□ -0.84
SH3D19-201ENST00000304527 PABPN1Q86U42 306 aaKnown RBP eCLIP9.8□□□□□ -0.84
SH3D19-201ENST00000304527 WIZO95785 1651 aa9.8□□□□□ -0.84
SH3D19-201ENST00000304527 PCGF6Q9BYE7 350 aa9.79□□□□□ -0.84
SH3D19-201ENST00000304527 SMARCA4P51532 1647 aa9.75□□□□□ -0.85
SH3D19-201ENST00000304527 TOP2AP11388 1531 aaKnown RBP9.74□□□□□ -0.85
SH3D19-201ENST00000304527 MYT1Q01538 1121 aa9.69□□□□□ -0.86
SH3D19-201ENST00000304527 TRIM26Q12899 539 aaPredicted RBP9.69□□□□□ -0.86
SH3D19-201ENST00000304527 UNC13AQ9UPW8 1703 aa9.69□□□□□ -0.86
SH3D19-201ENST00000304527 HRCP23327 699 aa9.69□□□□□ -0.86
SH3D19-201ENST00000304527 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
SH3D19-201ENST00000304527 BICRAQ9NZM4 1560 aa9.64□□□□□ -0.87
SH3D19-201ENST00000304527 SMARCA2P51531 1590 aa9.62□□□□□ -0.87
SH3D19-201ENST00000304527 BAZ1BQ9UIG0 1483 aaKnown RBP9.6□□□□□ -0.87
SH3D19-201ENST00000304527 EEA1Q15075 1411 aa9.57□□□□□ -0.88
SH3D19-201ENST00000304527 ATAD2BQ9ULI0 1458 aa9.56□□□□□ -0.88
SH3D19-201ENST00000304527 PEG3Q9GZU2 1588 aa9.55□□□□□ -0.88
SH3D19-201ENST00000304527 ZEB1P37275 1124 aaPredicted RBP9.55□□□□□ -0.88
SH3D19-201ENST00000304527 UBTFP17480 764 aaKnown RBP9.54□□□□□ -0.88
SH3D19-201ENST00000304527 EIF4G1Q04637 1599 aaKnown RBP9.54□□□□□ -0.88
SH3D19-201ENST00000304527 ABCC8Q09428 1581 aa9.54□□□□□ -0.88
SH3D19-201ENST00000304527 WRNQ14191 1432 aaPredicted RBP eCLIP9.53□□□□□ -0.88
SH3D19-201ENST00000304527 CSRNP3Q8WYN3 585 aa9.53□□□□□ -0.88
SH3D19-201ENST00000304527 ATP1B4Q9UN42 357 aaPredicted RBP9.51□□□□□ -0.89
SH3D19-201ENST00000304527 RANGAP1P46060 587 aaPredicted RBP9.5□□□□□ -0.89
SH3D19-201ENST00000304527 ERICH6Q7L0X2 663 aa9.48□□□□□ -0.89
SH3D19-201ENST00000304527 PLPPR3Q6T4P5 718 aa9.47□□□□□ -0.89
SH3D19-201ENST00000304527 SOGA1O94964 1423 aa9.46□□□□□ -0.9
SH3D19-201ENST00000304527 TNIKQ9UKE5 1360 aa9.45□□□□□ -0.9
SH3D19-201ENST00000304527 GOLGA3Q08378 1498 aa9.45□□□□□ -0.9
SH3D19-201ENST00000304527 MYT1LQ9UL68 1186 aa9.43□□□□□ -0.9
SH3D19-201ENST00000304527 CEP162Q5TB80 1403 aa9.43□□□□□ -0.9
SH3D19-201ENST00000304527 PPARGC1BQ86YN6 1023 aaKnown RBP9.43□□□□□ -0.9
SH3D19-201ENST00000304527 NCAPD3P42695 1498 aa9.42□□□□□ -0.9
SH3D19-201ENST00000304527 HMGXB3Q12766 1538 aa9.41□□□□□ -0.9
SH3D19-201ENST00000304527 CEP164Q9UPV0 1460 aa9.41□□□□□ -0.9
SH3D19-201ENST00000304527 PELP1Q8IZL8 1130 aaKnown RBP9.38□□□□□ -0.91
SH3D19-201ENST00000304527 TTBK1Q5TCY1 1321 aaPredicted RBP9.38□□□□□ -0.91
SH3D19-201ENST00000304527 SYNJ1O43426 1573 aa9.36□□□□□ -0.91
SH3D19-201ENST00000304527 RUSC2Q8N2Y8 1516 aa9.36□□□□□ -0.91
SH3D19-201ENST00000304527 CCER1Q8TC90 406 aaPredicted RBP9.35□□□□□ -0.91
SH3D19-201ENST00000304527 RTN4Q9NQC3 1192 aaKnown RBP9.35□□□□□ -0.91
SH3D19-201ENST00000304527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.34□□□□□ -0.91
SH3D19-201ENST00000304527 HNRNPUL2Q1KMD3 747 aaKnown RBP9.34□□□□□ -0.91
SH3D19-201ENST00000304527 CLIP1P30622 1438 aa9.33□□□□□ -0.92
SH3D19-201ENST00000304527 ERCC6Q03468 1493 aa9.33□□□□□ -0.92
SH3D19-201ENST00000304527 KIF21BO75037 1637 aa9.32□□□□□ -0.92
SH3D19-201ENST00000304527 TOP2BQ02880 1626 aa9.31□□□□□ -0.92
SH3D19-201ENST00000304527 PRKCSHP14314 528 aaPredicted RBP9.31□□□□□ -0.92
SH3D19-201ENST00000304527 KIF27Q86VH2 1401 aa9.3□□□□□ -0.92
SH3D19-201ENST00000304527 CFTRP13569 1480 aa9.29□□□□□ -0.92
SH3D19-201ENST00000304527 CADPSQ9ULU8 1353 aa9.27□□□□□ -0.93
SH3D19-201ENST00000304527 BIVM-ERCC5R4GMW8 1640 aa9.25□□□□□ -0.93
SH3D19-201ENST00000304527 PDS5BQ9NTI5 1447 aa9.25□□□□□ -0.93
SH3D19-201ENST00000304527 VPS8Q8N3P4 1428 aa9.25□□□□□ -0.93
SH3D19-201ENST00000304527 RAPGEF2Q9Y4G8 1499 aa9.25□□□□□ -0.93
SH3D19-201ENST00000304527 ERICH3Q5RHP9 1530 aa9.22□□□□□ -0.93
SH3D19-201ENST00000304527 CUX1P39880 1505 aa9.22□□□□□ -0.93
SH3D19-201ENST00000304527 CC2D2AQ9P2K1 1620 aa9.2□□□□□ -0.94
SH3D19-201ENST00000304527 CUX2O14529 1486 aa9.2□□□□□ -0.94
SH3D19-201ENST00000304527 PRXQ9BXM0 1461 aa9.19□□□□□ -0.94
SH3D19-201ENST00000304527 FANCD2Q9BXW9 1451 aa9.16□□□□□ -0.94
SH3D19-201ENST00000304527 PRDM2Q13029 1718 aa9.14□□□□□ -0.95
SH3D19-201ENST00000304527 FGD5Q6ZNL6 1462 aa9.14□□□□□ -0.95
SH3D19-201ENST00000304527 CARMIL1Q5VZK9 1371 aa9.14□□□□□ -0.95
SH3D19-201ENST00000304527 FBLN2P98095 1184 aa9.12□□□□□ -0.95
SH3D19-201ENST00000304527 DAXXQ9UER7 740 aaPredicted RBP9.12□□□□□ -0.95
SH3D19-201ENST00000304527 IGF1RP08069 1367 aa9.11□□□□□ -0.95
SH3D19-201ENST00000304527 NPM1P06748 294 aaKnown RBP eCLIP9.1□□□□□ -0.95
SH3D19-201ENST00000304527 DNMBPQ6XZF7 1577 aa9.08□□□□□ -0.96
SH3D19-201ENST00000304527 ARAP1Q96P48 1450 aa9.08□□□□□ -0.96
SH3D19-201ENST00000304527 FHAD1B1AJZ9 1412 aa9.06□□□□□ -0.96
SH3D19-201ENST00000304527 TOPBP1Q92547 1522 aa9.06□□□□□ -0.96
SH3D19-201ENST00000304527 TULP1O00294 542 aaPredicted RBP9.05□□□□□ -0.96
SH3D19-201ENST00000304527 LAMC3Q9Y6N6 1575 aa9.05□□□□□ -0.96
SH3D19-201ENST00000304527 ARHGAP35Q9NRY4 1499 aa9.04□□□□□ -0.96
SH3D19-201ENST00000304527 DIEXFQ68CQ4 756 aaKnown RBP9.03□□□□□ -0.96
SH3D19-201ENST00000304527 NESP48681 1621 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms