RNA–Protein interactions for RNA: ENST00000302392.4

TMEM42-201, Transcript of transmembrane protein 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM42, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42-201ENST00000302392 MAPKBP1O60336 1514 aa31.2■■■□□ 2.59
TMEM42-201ENST00000302392 RUSC2Q8N2Y8 1516 aa31.19■■■□□ 2.58
TMEM42-201ENST00000302392 FAM69CQ0P6D2 419 aa31.16■■■□□ 2.58
TMEM42-201ENST00000302392 KDM6BO15054 1643 aa31.13■■■□□ 2.57
TMEM42-201ENST00000302392 JPH4Q96JJ6 628 aa31.12■■■□□ 2.57
TMEM42-201ENST00000302392 ADCY10Q96PN6 1610 aa31.11■■■□□ 2.57
TMEM42-201ENST00000302392 NPM1P06748 294 aaKnown RBP eCLIP31.07■■■□□ 2.56
TMEM42-201ENST00000302392 TSPOAP1O95153 1857 aa31.01■■■□□ 2.56
TMEM42-201ENST00000302392 KDM4FA0A1W2PPD8 638 aa31.01■■■□□ 2.55
TMEM42-201ENST00000302392 SUPT5HO00267 1087 aaKnown RBP30.86■■■□□ 2.53
TMEM42-201ENST00000302392 ILDR1Q86SU0 546 aaPredicted RBP30.86■■■□□ 2.53
TMEM42-201ENST00000302392 KIAA0586Q9BVV6 1533 aa30.83■■■□□ 2.53
TMEM42-201ENST00000302392 CUL7Q14999 1698 aa30.75■■■□□ 2.51
TMEM42-201ENST00000302392 PPRC1Q5VV67 1664 aaKnown RBP30.73■■■□□ 2.51
TMEM42-201ENST00000302392 ADGRL1O94910 1474 aa30.7■■■□□ 2.51
TMEM42-201ENST00000302392 ABCC2Q92887 1545 aa30.68■■■□□ 2.5
TMEM42-201ENST00000302392 PTPRGP23470 1445 aa30.66■■■□□ 2.5
TMEM42-201ENST00000302392 GLI2P10070 1586 aa30.66■■■□□ 2.5
TMEM42-201ENST00000302392 ASXL2Q76L83 1435 aa30.62■■■□□ 2.49
TMEM42-201ENST00000302392 PLB1Q6P1J6 1458 aa30.61■■■□□ 2.49
TMEM42-201ENST00000302392 IGF1RP08069 1367 aa30.6■■■□□ 2.49
TMEM42-201ENST00000302392 KIF27Q86VH2 1401 aa30.58■■■□□ 2.49
TMEM42-201ENST00000302392 TNIKQ9UKE5 1360 aa30.57■■■□□ 2.48
TMEM42-201ENST00000302392 TTBK1Q5TCY1 1321 aaPredicted RBP30.57■■■□□ 2.48
TMEM42-201ENST00000302392 HECW2Q9P2P5 1572 aa30.56■■■□□ 2.48
TMEM42-201ENST00000302392 CARMIL2Q6F5E8 1435 aa30.56■■■□□ 2.48
TMEM42-201ENST00000302392 UHRF1BP1LA0JNW5 1464 aa30.5■■■□□ 2.47
TMEM42-201ENST00000302392 MAP3K4Q9Y6R4 1608 aa30.5■■■□□ 2.47
TMEM42-201ENST00000302392 IQGAP2Q13576 1575 aa30.49■■■□□ 2.47
TMEM42-201ENST00000302392 COL17A1Q9UMD9 1497 aaPredicted RBP30.47■■■□□ 2.47
TMEM42-201ENST00000302392 TEX14Q8IWB6 1497 aa30.44■■■□□ 2.46
TMEM42-201ENST00000302392 EPRSP07814 1512 aaKnown RBP30.44■■■□□ 2.46
TMEM42-201ENST00000302392 UACAQ9BZF9 1416 aa30.44■■■□□ 2.46
TMEM42-201ENST00000302392 CARMIL1Q5VZK9 1371 aa30.41■■■□□ 2.46
TMEM42-201ENST00000302392 KDM5BQ9UGL1 1544 aa30.38■■■□□ 2.45
TMEM42-201ENST00000302392 ZCCHC11Q5TAX3 1644 aaKnown RBP30.38■■■□□ 2.45
TMEM42-201ENST00000302392 DISP1Q96F81 1524 aa30.36■■■□□ 2.45
TMEM42-201ENST00000302392 KIAA0556O60303 1618 aa30.25■■■□□ 2.43
TMEM42-201ENST00000302392 UGGT2Q9NYU1 1516 aa30.24■■■□□ 2.43
TMEM42-201ENST00000302392 WDR7Q9Y4E6 1490 aa30.23■■■□□ 2.43
TMEM42-201ENST00000302392 CFAP43Q8NDM7 1665 aa30.16■■■□□ 2.42
TMEM42-201ENST00000302392 KIF21BO75037 1637 aa30.12■■■□□ 2.41
TMEM42-201ENST00000302392 MAGI3Q5TCQ9 1506 aa30.12■■■□□ 2.41
TMEM42-201ENST00000302392 RAPGEF2Q9Y4G8 1499 aa30.1■■■□□ 2.41
TMEM42-201ENST00000302392 CD109Q6YHK3 1445 aa30.07■■■□□ 2.4
TMEM42-201ENST00000302392 FBXO41Q8TF61 875 aa30.02■■■□□ 2.4
TMEM42-201ENST00000302392 CTTNBP2Q8WZ74 1663 aa30.01■■■□□ 2.4
TMEM42-201ENST00000302392 ABCA8O94911 1581 aa29.98■■■□□ 2.39
TMEM42-201ENST00000302392 KCNH8Q96L42 1107 aa29.93■■■□□ 2.38
TMEM42-201ENST00000302392 GOLGA3Q08378 1498 aa29.92■■■□□ 2.38
TMEM42-201ENST00000302392 ARAP3Q8WWN8 1544 aa29.89■■■□□ 2.38
TMEM42-201ENST00000302392 ADAMTSL3P82987 1691 aa29.88■■■□□ 2.37
TMEM42-201ENST00000302392 PTPRMP28827 1452 aa29.87■■■□□ 2.37
TMEM42-201ENST00000302392 PCF11O94913 1555 aaKnown RBP29.77■■■□□ 2.36
TMEM42-201ENST00000302392 ABCA9Q8IUA7 1624 aa29.76■■■□□ 2.35
TMEM42-201ENST00000302392 BCORL1Q5H9F3 1711 aa29.76■■■□□ 2.35
TMEM42-201ENST00000302392 MADDQ8WXG6 1647 aa29.74■■■□□ 2.35
TMEM42-201ENST00000302392 PHLDB1Q86UU1 1377 aa29.71■■■□□ 2.35
TMEM42-201ENST00000302392 LMTK3Q96Q04 1460 aa29.69■■■□□ 2.34
TMEM42-201ENST00000302392 FRMPD1Q5SYB0 1578 aa29.69■■■□□ 2.34
TMEM42-201ENST00000302392 ARID3CA6NKF2 412 aa29.66■■■□□ 2.34
TMEM42-201ENST00000302392 ATP10BO94823 1461 aa29.66■■■□□ 2.34
TMEM42-201ENST00000302392 NEO1Q92859 1461 aa29.65■■■□□ 2.34
TMEM42-201ENST00000302392 RAPGEF3O95398 923 aa29.62■■■□□ 2.33
TMEM42-201ENST00000302392 RIMS1Q86UR5 1692 aaKnown RBP29.62■■■□□ 2.33
TMEM42-201ENST00000302392 ARHGEF40Q8TER5 1519 aa29.61■■■□□ 2.33
TMEM42-201ENST00000302392 ARID4BQ4LE39 1312 aaPredicted RBP29.58■■■□□ 2.33
TMEM42-201ENST00000302392 PRXQ9BXM0 1461 aa29.58■■■□□ 2.33
TMEM42-201ENST00000302392 FAM9AQ8IZU1 332 aaPredicted RBP29.55■■■□□ 2.32
TMEM42-201ENST00000302392 RAPGEF6Q8TEU7 1601 aa29.54■■■□□ 2.32
TMEM42-201ENST00000302392 RICTORQ6R327 1708 aa29.49■■■□□ 2.31
TMEM42-201ENST00000302392 SAMD9Q5K651 1589 aa29.49■■■□□ 2.31
TMEM42-201ENST00000302392 P3H3Q8IVL6 736 aa29.49■■■□□ 2.31
TMEM42-201ENST00000302392 CFAP74Q9C0B2 1584 aa29.43■■■□□ 2.3
TMEM42-201ENST00000302392 DENND4BO75064 1496 aaPredicted RBP29.42■■■□□ 2.3
TMEM42-201ENST00000302392 HSPA2P54652 639 aa29.42■■■□□ 2.3
TMEM42-201ENST00000302392 FANCAO15360 1455 aa29.41■■■□□ 2.3
TMEM42-201ENST00000302392 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.39■■■□□ 2.3
TMEM42-201ENST00000302392 HNRNPUL2Q1KMD3 747 aaKnown RBP29.39■■■□□ 2.3
TMEM42-201ENST00000302392 POGZQ7Z3K3 1410 aa29.38■■■□□ 2.29
TMEM42-201ENST00000302392 NUP153P49790 1475 aaKnown RBP29.38■■■□□ 2.29
TMEM42-201ENST00000302392 ZMYM4Q5VZL5 1548 aa29.38■■■□□ 2.29
TMEM42-201ENST00000302392 SIGLEC1Q9BZZ2 1709 aa29.37■■■□□ 2.29
TMEM42-201ENST00000302392 FHOD3Q2V2M9 1422 aa29.37■■■□□ 2.29
TMEM42-201ENST00000302392 AKNAQ7Z591 1439 aa29.37■■■□□ 2.29
TMEM42-201ENST00000302392 FER1L4A9Z1Z3 1794 aa29.35■■■□□ 2.29
TMEM42-201ENST00000302392 PLPPR3Q6T4P5 718 aa29.35■■■□□ 2.29
TMEM42-201ENST00000302392 EFCAB5A4FU69 1503 aa29.35■■■□□ 2.29
TMEM42-201ENST00000302392 ZFYVE16Q7Z3T8 1539 aa29.35■■■□□ 2.29
TMEM42-201ENST00000302392 CERKQ8TCT0 537 aa29.33■■■□□ 2.29
TMEM42-201ENST00000302392 TTC37Q6PGP7 1564 aa29.31■■■□□ 2.28
TMEM42-201ENST00000302392 YEATS2Q9ULM3 1422 aa29.28■■■□□ 2.28
TMEM42-201ENST00000302392 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.27■■■□□ 2.28
TMEM42-201ENST00000302392 MAGI2Q86UL8 1455 aa29.24■■■□□ 2.27
TMEM42-201ENST00000302392 PREX1Q8TCU6 1659 aa29.24■■■□□ 2.27
TMEM42-201ENST00000302392 HECW1Q76N89 1606 aa29.23■■■□□ 2.27
TMEM42-201ENST00000302392 DISP3Q9P2K9 1392 aa29.19■■■□□ 2.26
TMEM42-201ENST00000302392 PLEKHD1A6NEE1 506 aa29.19■■■□□ 2.26
TMEM42-201ENST00000302392 MLECQ14165 292 aa29.18■■■□□ 2.26
TMEM42-201ENST00000302392 ARHGEF12Q9NZN5 1544 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms