RNA–Protein interactions for RNA: ENST00000301727.8

E4F1-201, Transcript of E4F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E4F1, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-201ENST00000301727 SETD5Q9C0A6 1442 aa27.57■■■□□ 2
E4F1-201ENST00000301727 MYT1LQ9UL68 1186 aa27.56■■■□□ 2
E4F1-201ENST00000301727 SIN3AQ96ST3 1273 aa27.55■■■□□ 2
E4F1-201ENST00000301727 TIMELESSQ9UNS1 1208 aa27.55■■■□□ 2
E4F1-201ENST00000301727 BIVM-ERCC5R4GMW8 1640 aa27.52■■■□□ 2
E4F1-201ENST00000301727 HIRIP3Q9BW71 556 aaPredicted RBP27.48■■□□□ 1.99
E4F1-201ENST00000301727 ARHGAP35Q9NRY4 1499 aa27.46■■□□□ 1.99
E4F1-201ENST00000301727 ATAD2BQ9ULI0 1458 aa27.37■■□□□ 1.97
E4F1-201ENST00000301727 IRX6P78412 446 aaPredicted RBP27.37■■□□□ 1.97
E4F1-201ENST00000301727 TIAM1Q13009 1591 aa27.36■■□□□ 1.97
E4F1-201ENST00000301727 DEKP35659 375 aaKnown RBP27.36■■□□□ 1.97
E4F1-201ENST00000301727 MAP3K1Q13233 1512 aa27.36■■□□□ 1.97
E4F1-201ENST00000301727 HNRNPUQ00839 825 aaKnown RBP eCLIP27.35■■□□□ 1.97
E4F1-201ENST00000301727 ERICH6BQ5W0A0 696 aa27.35■■□□□ 1.97
E4F1-201ENST00000301727 KIF27Q86VH2 1401 aa27.32■■□□□ 1.96
E4F1-201ENST00000301727 PRKCSHP14314 528 aaPredicted RBP27.31■■□□□ 1.96
E4F1-201ENST00000301727 PABPN1Q86U42 306 aaKnown RBP eCLIP27.3■■□□□ 1.963e-6■■■■□ 23.3
E4F1-201ENST00000301727 BICRAQ9NZM4 1560 aa27.29■■□□□ 1.96
E4F1-201ENST00000301727 PPP4R2Q9NY27 417 aa27.28■■□□□ 1.96
E4F1-201ENST00000301727 FAM50AQ14320 339 aaKnown RBP27.27■■□□□ 1.96
E4F1-201ENST00000301727 LRRC9Q6ZRR7 1453 aa27.26■■□□□ 1.95
E4F1-201ENST00000301727 PHLDB1Q86UU1 1377 aa27.26■■□□□ 1.95
E4F1-201ENST00000301727 TONSLQ96HA7 1378 aa27.2■■□□□ 1.94
E4F1-201ENST00000301727 CUX1P39880 1505 aa27.16■■□□□ 1.94
E4F1-201ENST00000301727 NOP58Q9Y2X3 529 aaKnown RBP27.13■■□□□ 1.93
E4F1-201ENST00000301727 CFAP43Q8NDM7 1665 aa27.07■■□□□ 1.92
E4F1-201ENST00000301727 B4GALNT3Q6L9W6 998 aa27.06■■□□□ 1.92
E4F1-201ENST00000301727 FHAD1B1AJZ9 1412 aa27.06■■□□□ 1.92
E4F1-201ENST00000301727 NBR1Q14596 966 aa27.04■■□□□ 1.92
E4F1-201ENST00000301727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.02■■□□□ 1.928e-7■■■■□ 20
E4F1-201ENST00000301727 PAK3O75914 559 aaPredicted RBP26.98■■□□□ 1.91
E4F1-201ENST00000301727 CCDC18Q5T9S5 1454 aa26.95■■□□□ 1.91
E4F1-201ENST00000301727 PCF11O94913 1555 aaKnown RBP26.94■■□□□ 1.9
E4F1-201ENST00000301727 UACAQ9BZF9 1416 aa26.94■■□□□ 1.9
E4F1-201ENST00000301727 WASHC2AQ641Q2 1341 aa26.94■■□□□ 1.9
E4F1-201ENST00000301727 IGF1RP08069 1367 aa26.91■■□□□ 1.9
E4F1-201ENST00000301727 ZBED9Q6R2W3 1325 aa26.9■■□□□ 1.9
E4F1-201ENST00000301727 CCDC184Q52MB2 194 aa26.89■■□□□ 1.89
E4F1-201ENST00000301727 ATP1B4Q9UN42 357 aaPredicted RBP26.88■■□□□ 1.89
E4F1-201ENST00000301727 KDM5BQ9UGL1 1544 aa26.88■■□□□ 1.89
E4F1-201ENST00000301727 ANO8Q9HCE9 1232 aaPredicted RBP26.87■■□□□ 1.89
E4F1-201ENST00000301727 HSPA5P11021 654 aaKnown RBP26.87■■□□□ 1.89
E4F1-201ENST00000301727 RTL5Q5HYW3 569 aaPredicted RBP26.87■■□□□ 1.89
E4F1-201ENST00000301727 CNTLNQ9NXG0 1405 aa26.87■■□□□ 1.89
E4F1-201ENST00000301727 NCOA2Q15596 1464 aa26.86■■□□□ 1.89
E4F1-201ENST00000301727 FAM9BQ8IZU0 186 aa26.85■■□□□ 1.89
E4F1-201ENST00000301727 ANP32AP39687 249 aaKnown RBP26.85■■□□□ 1.89
E4F1-201ENST00000301727 HFM1A2PYH4 1435 aa26.84■■□□□ 1.89
E4F1-201ENST00000301727 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
E4F1-201ENST00000301727 IPO9Q96P70 1041 aaKnown RBP26.83■■□□□ 1.89
E4F1-201ENST00000301727 PTPN23Q9H3S7 1636 aa26.82■■□□□ 1.88
E4F1-201ENST00000301727 FGD6Q6ZV73 1430 aa26.81■■□□□ 1.88
E4F1-201ENST00000301727 MRS2Q9HD23 443 aa26.8■■□□□ 1.88
E4F1-201ENST00000301727 FYCO1Q9BQS8 1478 aa26.79■■□□□ 1.88
E4F1-201ENST00000301727 PRKRIP1Q9H875 184 aaPredicted RBP26.79■■□□□ 1.88
E4F1-201ENST00000301727 P3H3Q8IVL6 736 aa26.79■■□□□ 1.88
E4F1-201ENST00000301727 EIF4G2P78344 907 aaKnown RBP eCLIP26.78■■□□□ 1.88
E4F1-201ENST00000301727 ZBTB47Q9UFB7 747 aaPredicted RBP26.78■■□□□ 1.88
E4F1-201ENST00000301727 PTPRKQ15262 1439 aa26.73■■□□□ 1.87
E4F1-201ENST00000301727 CFTRP13569 1480 aa26.73■■□□□ 1.87
E4F1-201ENST00000301727 NAIPQ13075 1403 aa26.72■■□□□ 1.87
E4F1-201ENST00000301727 CASKIN1Q8WXD9 1431 aa26.72■■□□□ 1.87
E4F1-201ENST00000301727 FHOD3Q2V2M9 1422 aa26.71■■□□□ 1.87
E4F1-201ENST00000301727 SALL2Q9Y467 1007 aaPredicted RBP26.7■■□□□ 1.87
E4F1-201ENST00000301727 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.86
E4F1-201ENST00000301727 CCDC136Q96JN2 1154 aa26.7■■□□□ 1.86
E4F1-201ENST00000301727 AQRO60306 1485 aaKnown RBP eCLIP26.69■■□□□ 1.861e-6■■■■■ 73.8
E4F1-201ENST00000301727 HMGXB3Q12766 1538 aa26.68■■□□□ 1.86
E4F1-201ENST00000301727 FMN1Q68DA7 1419 aa26.67■■□□□ 1.86
E4F1-201ENST00000301727 SMG6Q86US8 1419 aaKnown RBP26.67■■□□□ 1.86
E4F1-201ENST00000301727 CCDC7Q96M83 1385 aa26.67■■□□□ 1.86
E4F1-201ENST00000301727 NCOA1Q15788 1441 aa26.66■■□□□ 1.86
E4F1-201ENST00000301727 NCAPD3P42695 1498 aa26.66■■□□□ 1.86
E4F1-201ENST00000301727 AKNAQ7Z591 1439 aa26.64■■□□□ 1.86
E4F1-201ENST00000301727 IL27Q8NEV9 243 aa26.63■■□□□ 1.85
E4F1-201ENST00000301727 EFCAB5A4FU69 1503 aa26.63■■□□□ 1.85
E4F1-201ENST00000301727 C11orf95C9JLR9 678 aaPredicted RBP26.62■■□□□ 1.85
E4F1-201ENST00000301727 RNF123Q5XPI4 1314 aa26.6■■□□□ 1.85
E4F1-201ENST00000301727 NUDCQ9Y266 331 aa26.58■■□□□ 1.85
E4F1-201ENST00000301727 MTUS2Q5JR59 1369 aa26.58■■□□□ 1.85
E4F1-201ENST00000301727 PRDM2Q13029 1718 aa26.55■■□□□ 1.84
E4F1-201ENST00000301727 HECW1Q76N89 1606 aa26.53■■□□□ 1.84
E4F1-201ENST00000301727 MYOM3Q5VTT5 1437 aa26.52■■□□□ 1.84
E4F1-201ENST00000301727 RTN4Q9NQC3 1192 aaKnown RBP26.51■■□□□ 1.83
E4F1-201ENST00000301727 USP35Q9P2H5 1018 aa26.5■■□□□ 1.83
E4F1-201ENST00000301727 DENND4BO75064 1496 aaPredicted RBP26.49■■□□□ 1.83
E4F1-201ENST00000301727 L3MBTL2Q969R5 705 aa26.49■■□□□ 1.83
E4F1-201ENST00000301727 ABCA5Q8WWZ7 1642 aa26.48■■□□□ 1.83
E4F1-201ENST00000301727 POLR1AO95602 1720 aaPredicted RBP26.46■■□□□ 1.83
E4F1-201ENST00000301727 SNAPC4Q5SXM2 1469 aa26.46■■□□□ 1.83
E4F1-201ENST00000301727 KIF7Q2M1P5 1343 aa26.46■■□□□ 1.83
E4F1-201ENST00000301727 NEFMP07197 916 aa26.45■■□□□ 1.82
E4F1-201ENST00000301727 RRP7BPQ9NSQ0 103 aa26.44■■□□□ 1.82
E4F1-201ENST00000301727 GCC2Q8IWJ2 1684 aa26.44■■□□□ 1.82
E4F1-201ENST00000301727 NPM2Q86SE8 214 aaKnown RBP26.42■■□□□ 1.82
E4F1-201ENST00000301727 SUPT6HQ7KZ85 1726 aaKnown RBP26.41■■□□□ 1.82
E4F1-201ENST00000301727 LAS1LQ9Y4W2 734 aaKnown RBP26.39■■□□□ 1.82
E4F1-201ENST00000301727 CTTNBP2Q8WZ74 1663 aa26.39■■□□□ 1.82
E4F1-201ENST00000301727 MPHOSPH9Q99550 1183 aa26.38■■□□□ 1.81
E4F1-201ENST00000301727 WASHC2CQ9Y4E1 1318 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms