RNA–Protein interactions for RNA: ENST00000296550.11

DCLK2-201, Transcript of doublecortin like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK2, Length 4,265 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK2-201ENST00000296550 HNRNPUQ00839 825 aaKnown RBP eCLIP22.57■■□□□ 1.2
DCLK2-201ENST00000296550 RAB3GAP2Q9H2M9 1393 aa22.57■■□□□ 1.2
DCLK2-201ENST00000296550 SETD5Q9C0A6 1442 aa22.56■■□□□ 1.2
DCLK2-201ENST00000296550 NCAPD3P42695 1498 aa22.54■■□□□ 1.2
DCLK2-201ENST00000296550 DHX57Q6P158 1386 aaKnown RBP22.53■■□□□ 1.2
DCLK2-201ENST00000296550 KIF21BO75037 1637 aa22.52■■□□□ 1.2
DCLK2-201ENST00000296550 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
DCLK2-201ENST00000296550 BCL11AQ9H165 835 aa22.5■■□□□ 1.19
DCLK2-201ENST00000296550 BICRAQ9NZM4 1560 aa22.48■■□□□ 1.19
DCLK2-201ENST00000296550 IGF1RP08069 1367 aa22.48■■□□□ 1.19
DCLK2-201ENST00000296550 EIF4G2P78344 907 aaKnown RBP eCLIP22.46■■□□□ 1.19
DCLK2-201ENST00000296550 FAM9BQ8IZU0 186 aa22.45■■□□□ 1.19
DCLK2-201ENST00000296550 SLC4A1APQ9BWU0 796 aaKnown RBP22.45■■□□□ 1.18
DCLK2-201ENST00000296550 ARHGAP35Q9NRY4 1499 aa22.45■■□□□ 1.18
DCLK2-201ENST00000296550 FHOD3Q2V2M9 1422 aa22.44■■□□□ 1.18
DCLK2-201ENST00000296550 TIMELESSQ9UNS1 1208 aa22.44■■□□□ 1.18
DCLK2-201ENST00000296550 EIF4G1Q04637 1599 aaKnown RBP22.41■■□□□ 1.18
DCLK2-201ENST00000296550 FMN1Q68DA7 1419 aa22.37■■□□□ 1.17
DCLK2-201ENST00000296550 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
DCLK2-201ENST00000296550 TSPY4P0CV99 314 aa22.36■■□□□ 1.17
DCLK2-201ENST00000296550 TSPY10P0CW01 314 aa22.36■■□□□ 1.17
DCLK2-201ENST00000296550 PRXQ9BXM0 1461 aa22.36■■□□□ 1.17
DCLK2-201ENST00000296550 ARAP1Q96P48 1450 aa22.35■■□□□ 1.17
DCLK2-201ENST00000296550 ANP32EQ9BTT0 268 aa22.35■■□□□ 1.17
DCLK2-201ENST00000296550 MRS2Q9HD23 443 aa22.35■■□□□ 1.17
DCLK2-201ENST00000296550 FGD5Q6ZNL6 1462 aa22.35■■□□□ 1.17
DCLK2-201ENST00000296550 CFTRP13569 1480 aa22.34■■□□□ 1.17
DCLK2-201ENST00000296550 CFDP1Q9UEE9 299 aaPredicted RBP22.33■■□□□ 1.17
DCLK2-201ENST00000296550 TOP2BQ02880 1626 aa22.33■■□□□ 1.17
DCLK2-201ENST00000296550 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
DCLK2-201ENST00000296550 SUPT16HQ9Y5B9 1047 aaKnown RBP22.31■■□□□ 1.16
DCLK2-201ENST00000296550 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
DCLK2-201ENST00000296550 ERCC6Q03468 1493 aa22.3■■□□□ 1.16
DCLK2-201ENST00000296550 PLEKHD1A6NEE1 506 aa22.29■■□□□ 1.16
DCLK2-201ENST00000296550 PPP1R15AO75807 674 aaPredicted RBP22.29■■□□□ 1.16
DCLK2-201ENST00000296550 KDM2AQ9Y2K7 1162 aa22.29■■□□□ 1.16
DCLK2-201ENST00000296550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.28■■□□□ 1.16
DCLK2-201ENST00000296550 IRX6P78412 446 aaPredicted RBP22.27■■□□□ 1.16
DCLK2-201ENST00000296550 CUX1P39880 1505 aa22.26■■□□□ 1.15
DCLK2-201ENST00000296550 PEG3Q9GZU2 1588 aa22.24■■□□□ 1.15
DCLK2-201ENST00000296550 RAD54L2Q9Y4B4 1467 aa22.24■■□□□ 1.15
DCLK2-201ENST00000296550 UNC13AQ9UPW8 1703 aa22.24■■□□□ 1.15
DCLK2-201ENST00000296550 KCNH8Q96L42 1107 aa22.21■■□□□ 1.15
DCLK2-201ENST00000296550 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
DCLK2-201ENST00000296550 TMC1Q8TDI8 760 aa22.2■■□□□ 1.14
DCLK2-201ENST00000296550 PHLDB1Q86UU1 1377 aa22.19■■□□□ 1.14
DCLK2-201ENST00000296550 FOXD1Q16676 465 aa22.18■■□□□ 1.14
DCLK2-201ENST00000296550 RRBP1Q9P2E9 1410 aaKnown RBP22.16■■□□□ 1.14
DCLK2-201ENST00000296550 CCER2I3L3R5 266 aa22.16■■□□□ 1.14
DCLK2-201ENST00000296550 DAXXQ9UER7 740 aaPredicted RBP22.16■■□□□ 1.14
DCLK2-201ENST00000296550 NPM1P06748 294 aaKnown RBP eCLIP22.15■■□□□ 1.14
DCLK2-201ENST00000296550 HSPA5P11021 654 aaKnown RBP22.14■■□□□ 1.13
DCLK2-201ENST00000296550 LRRC9Q6ZRR7 1453 aa22.13■■□□□ 1.13
DCLK2-201ENST00000296550 SALL2Q9Y467 1007 aaPredicted RBP22.13■■□□□ 1.13
DCLK2-201ENST00000296550 MPHOSPH9Q99550 1183 aa22.12■■□□□ 1.13
DCLK2-201ENST00000296550 CHGAP10645 457 aaKnown RBP22.08■■□□□ 1.13
DCLK2-201ENST00000296550 RGL3Q3MIN7 710 aa22.06■■□□□ 1.12
DCLK2-201ENST00000296550 SENP3-EIF4A1A0A087X0R7 540 aa22.04■■□□□ 1.12
DCLK2-201ENST00000296550 CARD11Q9BXL7 1154 aa22.03■■□□□ 1.12
DCLK2-201ENST00000296550 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
DCLK2-201ENST00000296550 L3MBTL2Q969R5 705 aa22.02■■□□□ 1.12
DCLK2-201ENST00000296550 RTL5Q5HYW3 569 aaPredicted RBP22.01■■□□□ 1.11
DCLK2-201ENST00000296550 TSHZ2Q9NRE2 1034 aa22.01■■□□□ 1.11
DCLK2-201ENST00000296550 FGD6Q6ZV73 1430 aa22■■□□□ 1.11
DCLK2-201ENST00000296550 CCDC136Q96JN2 1154 aa22■■□□□ 1.11
DCLK2-201ENST00000296550 CCDC18Q5T9S5 1454 aa21.99■■□□□ 1.11
DCLK2-201ENST00000296550 NESP48681 1621 aa21.99■■□□□ 1.11
DCLK2-201ENST00000296550 CASKIN1Q8WXD9 1431 aa21.98■■□□□ 1.11
DCLK2-201ENST00000296550 PKD2Q13563 968 aa21.97■■□□□ 1.11
DCLK2-201ENST00000296550 POLA1P09884 1462 aaPredicted RBP21.92■■□□□ 1.1
DCLK2-201ENST00000296550 ANP32AP39687 249 aaKnown RBP21.92■■□□□ 1.1
DCLK2-201ENST00000296550 TOPBP1Q92547 1522 aa21.91■■□□□ 1.1
DCLK2-201ENST00000296550 TIAM1Q13009 1591 aa21.91■■□□□ 1.1
DCLK2-201ENST00000296550 MYOM3Q5VTT5 1437 aa21.9■■□□□ 1.1
DCLK2-201ENST00000296550 DCAF11Q8TEB1 546 aa21.9■■□□□ 1.1
DCLK2-201ENST00000296550 CC2D2AQ9P2K1 1620 aa21.89■■□□□ 1.09
DCLK2-201ENST00000296550 FYCO1Q9BQS8 1478 aa21.89■■□□□ 1.09
DCLK2-201ENST00000296550 CARMIL2Q6F5E8 1435 aa21.88■■□□□ 1.09
DCLK2-201ENST00000296550 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
DCLK2-201ENST00000296550 NPM2Q86SE8 214 aaKnown RBP21.86■■□□□ 1.09
DCLK2-201ENST00000296550 UACAQ9BZF9 1416 aa21.85■■□□□ 1.09
DCLK2-201ENST00000296550 JPH4Q96JJ6 628 aa21.84■■□□□ 1.09
DCLK2-201ENST00000296550 NCOA2Q15596 1464 aa21.84■■□□□ 1.09
DCLK2-201ENST00000296550 PPP4R2Q9NY27 417 aa21.83■■□□□ 1.09
DCLK2-201ENST00000296550 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.09
DCLK2-201ENST00000296550 NUP155O75694 1391 aa21.82■■□□□ 1.08
DCLK2-201ENST00000296550 CANXP27824 592 aaKnown RBP21.82■■□□□ 1.08
DCLK2-201ENST00000296550 ANKRD30AQ9BXX3 1397 aa21.81■■□□□ 1.08
DCLK2-201ENST00000296550 WDR43Q15061 677 aaKnown RBP eCLIP21.8■■□□□ 1.08
DCLK2-201ENST00000296550 STAG3Q9UJ98 1225 aa21.8■■□□□ 1.08
DCLK2-201ENST00000296550 EFCAB5A4FU69 1503 aa21.79■■□□□ 1.08
DCLK2-201ENST00000296550 ZNF644Q9H582 1327 aaPredicted RBP21.79■■□□□ 1.08
DCLK2-201ENST00000296550 B4GALNT3Q6L9W6 998 aa21.78■■□□□ 1.08
DCLK2-201ENST00000296550 DNMBPQ6XZF7 1577 aa21.77■■□□□ 1.07
DCLK2-201ENST00000296550 ESF1Q9H501 851 aaKnown RBP21.76■■□□□ 1.07
DCLK2-201ENST00000296550 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
DCLK2-201ENST00000296550 HNRNPMP52272 730 aaKnown RBP eCLIP21.75■■□□□ 1.07
DCLK2-201ENST00000296550 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
DCLK2-201ENST00000296550 RBM19Q9Y4C8 960 aaKnown RBP21.72■■□□□ 1.07
DCLK2-201ENST00000296550 DNAJC5BQ9UF47 199 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms